Evolutional selection of a combinatorial phage library displaying randomly-rearranged various single domains of immunoglobulin (Ig)-binding proteins (IBPs) with four kinds of Ig molecules

BMC Microbiology

Volumn 8, Issue , 2008, Pages

  Yang, Hua ^a   Cao, Jie ^b   Li, Lian Qing ^c   Zhou, Xia ^a   Chen, Qiu Li ^b   Liao, Wen Ting ^b   Wen, Zong Mei ^b   Jiang, Shao Hua ^b   Xu, Rong ^b   Jia, Jian An ^b   Pan, Xin ^b   Qi, Zhong Tian ^b   Pan, Wei ^b  

^a Department of Microbiology and Immunology   (China)

^b SECOND MILITARY MEDICAL UNIVERSITY   (China)

^c Center of Clinical Diagnosis   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; HYBRID PROTEIN; IMMUNOGLOBULIN; IMMUNOGLOBULIN A; IMMUNOGLOBULIN G; IMMUNOGLOBULIN G1; IMMUNOGLOBULIN M; PROTEIN A; PROTEIN G; PROTEIN L; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; IG L BINDING PROTEIN, PEPTOSTREPTOCOCCUS; IG L-BINDING PROTEIN, PEPTOSTREPTOCOCCUS; IGG FC BINDING PROTEIN, STREPTOCOCCUS; IGG FC-BINDING PROTEIN, STREPTOCOCCUS; PEPTIDE LIBRARY; STAPHYLOCOCCUS PROTEIN A;

ARTICLE; BACTERIOPHAGE; BINDING AFFINITY; BINDING ASSAY; CONTROLLED STUDY; DNA SEQUENCE; ENZYME LINKED IMMUNOSORBENT ASSAY; GEL ELECTROPHORESIS; HUMAN; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; SEQUENCE ANALYSIS; WESTERN BLOTTING; AMINO ACID SEQUENCE; BINDING COMPETITION; IMMUNOLOGY; METABOLISM; SEQUENCE ALIGNMENT;

MAMMALIA;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BINDING, COMPETITIVE; HUMANS; IMMUNOGLOBULINS; PEPTIDE LIBRARY; SEQUENCE ALIGNMENT; STAPHYLOCOCCAL PROTEIN A;

EID: 51349122315     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-8-137     Document Type: Article

References (35)

1. Receptins: a novel term for an expanding spectrum of natural and engineered microbial proteins with binding properties for mammalian proteins. G Kronvall K Jönsson, J Mol Recognit 1999 12 38 44 10.1002/(SICI)1099- 1352(199901/02)12:1<38::AID-JMR378>3.0.CO;2-Q 10398395
2. Complete sequence of the staphylococcal gene encoding protein A. A gene evolved through multiple duplication. M Uhlen B Guss B Nilson S Gatenbeck L Philipson M Lindberg, J Biol Chem 1984 259 1695 1702 6319407
3. Staphylococcal protein A consists of five IgG-binding domains. T Moks L Abrahmsen B Nilsson U Hellman J Sjoquist M Uhlen, Eur J Biochem 1986 156 637 643 10.1111/j.1432-1033.1986.tb09625.x 2938951
4. Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures. H Gouda H Torigoe A Saito M Sato Y Arata I Shimada, Biochemistry 1992 31 9665 9672 10.1021/bi00155a020 1390743
5. Gene for an immunoglobulin-binding proteint from a group G streptococcus. SR Fahnestock P Alexander J Nagle D Filpula, J Bacteriol 1986 167 870 880 3745123
6. A novel highly stable fold of the immunoglobulin binding domain of streptococcal protein G. AM Gronenborn DR Filpula NZ Essig A Achari M Whitlow PT Wingfield GM Clore, Science 1991 253 657 661 10.1126/science.1871600 1871600
7. 1.67-Å X-ray structure of the B2 immunoglobulin-binding domain of streptococcal protein G and comparison to the NMR structure of the B1 domain. A Achari SP Hale AJ Howard GM Clore AM Gronenborn KD Hardman M Whitlow, Biochemistry 1992 31 10449 10457 10.1021/bi00158a006 1420164
8. Protein L from Peptostreptococcus magnus binds to the kappa light chain variable domain. BH Nilson A Solomon L Björck B Akerstrom, J Biol Chem 1992 267 2234 2239 1733930
9. Three-dimensional solution structure of an immunoglobulin light chain-binding domain of protein L. Comparison with the IgG-binding domains of protein G. M Wikstrom T Drakenberg S Forsen U Sjobring L Bjorck, Biochemistry 1994 33 14011 14017 10.1021/bi00251a008 7947810
10. The Fc binding site for streptococcal protein G is in the Cγ2-Cγ3 interface region of IgG and is related to the sites that bind staphylococcal protein A and human rheumatoid factors. GC Stone U Sjobring L Bjorck J Sjoquist CV Barber FA Nardella, J Immunol 1989 143 565 570 2738404
11. Human IgA and IgG F(ab')2 that bind to staphylococcal protein A belong to the VHIII subgroup. EH Sasso GJ Silverman M Mannik, J Immunol 1991 147 1877 1883 1909733
12. The interaction between different domains of staphylococcal protein A and human polyclonal IgG, IgA, IgM and F(ab')2: separation of affinity from specificity. UK Ljungberg B Jansson U Niss R Nilsson BE Sandberg B Nilsson, Mol Immunol 1993 30 1279 1285 10.1016/0161-5890(93)90044-C 8413328
13. Mapping the interactions between streptococcal protein G and the Fab fragment of immuneoglobulin G in solution. LY Lian IL Barsukov JP Derrick GC Roberts, Nature Struct Biol 1994 1 6 355 357 10.1038/nsb0694-355 7664045
14. Interactions between a single immunoglobulin-binding domain of protein L from Peptostreptococcus magnus and a human kappa light chain. JA Beckingham SP Bottomley R Hinton BJ Sutton MG Gore, Biochem J 1999 340 193 199 10229674 10.1042/0264-6021:3400193
15. Complex between Peptostreptococcus magnus protein L and a human antibody reveals structural convergence in the interaction modes of Fab binding proteins. M Graille EA Stura NG Housden JA Beckingham SP Bottomley D Beale MJ Taussig BJ Sutton MG Gore JB Charbonnier, Structure 2001 9 679 687 10.1016/S0969-2126(01) 00630-X 11587642
16. Chimeric IgG-binding receptors engineered from staphylococcal protein A and streptococcal protein G. M Eliasson A Olsson E Palmcrantz K Wiberg M Inganas B Guss M Lindberg M Uhlen, J Biol Chem 1988 263 4323 4327 2964447
17. Protein LG: a hybrid molecule with unique immunoglobulin binding properties. W Kastern U Sjöbring L Björck, J Biol Chem 1992 267 25583 25588 1460053
18. Protein LA, a novel hybrid protein with unique single-chain Fv antibody- and Fab-binding properties. HG Svensson HR Hoogenboom U Sjöbring, Eur J Biochem 1998 258 890 896 10.1046/j.1432-1327.1998.2580890.x 9874260
19. Repetitive sequences in protein A from Staphylococcus aureus. Arrangement of five regions within the protein, four being highly homologous and Fc-binding. J Sjodahl, Eur J Biochem 1977 73 343 351 10.1111/j.1432-1033.1977. tb11324.x 557409
20. Structure of the IgG-binding regions of streptococcal protein G. B Guss M Eliasson A Olsson M Uhlén AK Frej H Jörnvall JI Flock M Lindberg, EMBO J 1986 5 1567 1575 3017704
21. All individual domains of staphylococcal protein A show Fab binding. B Jansson M Uhlén PA Nygren, FEMS Immunol Med Mic 1998 20 69 78 10.1016/S0928-8244(97)00108-9
22. Phage display of random combinatorial libraries of Ig-binding mono-domains of protein A and protein L and Ig affinity screening. X Rong S Yijun D Songhua C Xiaochun C Qiuli J Jianan W Jinhong P Xin P Wei, Prog Biochem Biophys 2005 32 535 543
23. Human IgM molecules that bind to staphylococcal protein A contain VHIII H chains. EH Sasso GJ Silverman M Mannik, J Immunol 1989 142 2778 2783 2495325
24. Domain interactions in the Fab fragment: a comparative evaluation of the single-chain Fv and Fab format engineered with variable domains of different stability. D Röthlisberger A Honegger A Plückthun, J Mol Biol 2005 347 4 773 789 10.1016/j.jmb.2005.01.053 15769469
25. Crystal structure of a Staphylococcus aureus protein A domain complexed with the Fab fragment of a human IgM antibody: structural basis for the recognition of B-cell receptors and superantigen activity. M Graille EA Stura AL Corper BJ Sutton MJ Taussig JB Charbonnier GJ Silverman, Proc Natl Acad Sci USA 2000 97 5399 5404 10805799 10.1073/pnas.97.10.5399
26. Convergent solutions to binding at a protein-protein interface. WL DeLano MH Ultsch AM de Vos JA Wells, Science 2000 287 1279 1283 10.1126/science.287. 5456.1279 10678837
27. IgG-Fc-mediated effector functions: molecular definition of interaction sites for effector ligands and the role of glycosylation. R Jefferis J Lund JD Pound, Immunol Rev 1998 163 59 74 10.1111/j.1600-065X.1998.tb01188.x 9700502
28. Variable region domain exchange in human IgGs promotes antibody complex formation with accompanying structural changes and altered effector functions. LA Chan ML Phillips LA Wims KR Trinh J Denham SL Morrison, Mol Immunol 2004 41 527 538 10.1016/j.molimm.2004.03.034 15183931
29. Conformational changes in the antibody constant domains upon hapten-binding. T Sagawa M Oda H Morii H Takizawa H Kozono T Azuma, Mol Immunol 2005 42 9 18 10.1016/j.molimm.2004.07.004 15488939
30. Recognition of immunoglobulins by Fcgamma receptors. S Radaev P Sun, Mol Immunol 2002 38 14 1073 1083 10.1016/S0161-5890(02)00036-6 11955599
31. Model for the complex between protein G and an antibody Fc fragment in solution. K Katol LY Lian IL Barsukov JP Derrick H Kim R Tanaka A Yoshino M Shiraishi I Shimada Y Arata, Structure 1995 3 1 79 85 10.1016/S0969-2126(01) 00136-8 7743134
32. Crystal structure of the C2 fragment of streptococcal protein G in complex with the Fc domain of human IgG. AE Sauer-Eriksson GJ Kleywegt M Uhlen TA Jones, Structure 1995 3 3 265 278 10.1016/S0969-2126(01)00157-5 7788293
33. Construction of phage-displayed random combinatorial library of single domains of immunoglobulin-binding molecules. Y Hua L Lianqing W Peixia X Rong S Yijun J Jianan P Xin C Qiuli P Wei, Acad J Sec Mil Med Univ 2005 6 396 401 (in Chinese)
34. Construction of a novel phagemid pCANTAB5S. X Rong P Wei S Yijun C Qiuli P Xin F Chunzhi Q Zhongtian L Yanjun D Songhua, Acta Universitatis Medicinalis Anhui 2004 39 83 86 (in Chinese)
35. Gene for staphylococcal protein A. S Lofdahl B Guss M Uhlen L Philipson M Lindberg, Proc Natl Acad Sci USA 1983 80 3 697 701 6338496 10.1073/pnas.80.3. 697