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Volumn , Issue , 2008, Pages 9-12

A simple di-nucleotide based DNA analysis applied to phylogeny of mammals using zinc fingers

Author keywords

Cp< inf>G di nucleotide percentage; Component: phylogenetic tree; Marfan syndrome exon; Normalized Euclidean distance; ZFP91; Zinc finger; ZNF 174; ZNF431; ZNF91

Indexed keywords

BIOCOMMUNICATIONS; BIOINFORMATICS; BIOLOGY; BIOMEDICAL ENGINEERING; DNA; FRACTAL DIMENSION; GENES; INFORMATION SCIENCE; MAMMALS; NUCLEIC ACIDS; NUCLEOTIDES; ORGANIC ACIDS; RISK ASSESSMENT; VECTORS; ZINC;

EID: 50949127762     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICBBE.2008.9     Document Type: Conference Paper
Times cited : (1)

References (22)
  • 1
    • 0036909632 scopus 로고    scopus 로고
    • Estimating divergence times from molecular data on phylogenetic and population genetic timescales
    • B. S. Arbogast, S. V. Edwards, J. Wakeley, P. Beerli, and J. B. Slowinski, "Estimating divergence times from molecular data on phylogenetic and population genetic timescales", Annu. Rev. Ecol. Syst., vol. 33, pp. 707-40, 2002.
    • (2002) Annu. Rev. Ecol. Syst , vol.33 , pp. 707-740
    • Arbogast, B.S.1    Edwards, S.V.2    Wakeley, J.3    Beerli, P.4    Slowinski, J.B.5
  • 2
    • 0032416149 scopus 로고    scopus 로고
    • Models of molecular evolution and phylogeny
    • P. Liò and N. Goldman, "Models of molecular evolution and phylogeny", Genome Res., vol. 8, pp. 1233-1244, 1998.
    • (1998) Genome Res , vol.8 , pp. 1233-1244
    • Liò, P.1    Goldman, N.2
  • 4
    • 0033775967 scopus 로고    scopus 로고
    • Multiple sequence alignment in phylogenetic analysis
    • A. Phillips, D. Janies, and W. Wheeler, "Multiple sequence alignment in phylogenetic analysis", Mol. Phylogenet. Evol., vol. 16, pp. 317-330, 2000.
    • (2000) Mol. Phylogenet. Evol , vol.16 , pp. 317-330
    • Phillips, A.1    Janies, D.2    Wheeler, W.3
  • 5
    • 0028289467 scopus 로고
    • Issues in searching molecular sequence databases
    • S. F. Altschul, M. S. Boguski, W. Gish, and J. Wootton, "Issues in searching molecular sequence databases", Nature Gen., vol. 6, pp. 119-129, 1994.
    • (1994) Nature Gen , vol.6 , pp. 119-129
    • Altschul, S.F.1    Boguski, M.S.2    Gish, W.3    Wootton, J.4
  • 6
    • 0033012594 scopus 로고    scopus 로고
    • A Probabilistic Treatment of Phylogeny and Sequence Alignment
    • G.J. Mitchison, "A Probabilistic Treatment of Phylogeny and Sequence Alignment", J. Mol. Evol. vol. 49, pp. 11-22, 1999.
    • (1999) J. Mol. Evol , vol.49 , pp. 11-22
    • Mitchison, G.J.1
  • 7
    • 33744993430 scopus 로고    scopus 로고
    • Multiple Sequence Alignment Accuracy and Phylogenetic Inference
    • T. H. Ogden and M. S. Rosenberg, "Multiple Sequence Alignment Accuracy and Phylogenetic Inference", Syst. Biol., vol. 55, pp. 314-328, 2006.
    • (2006) Syst. Biol , vol.55 , pp. 314-328
    • Ogden, T.H.1    Rosenberg, M.S.2
  • 8
    • 0000204878 scopus 로고
    • Evolution of long-range fractal correlationss and 1/f noise in DNA base sequences
    • R.F. Voss, "Evolution of long-range fractal correlationss and 1/f noise in DNA base sequences", Phys. Rev. Lett., vol. 68, pp. 3805-3808, 1992.
    • (1992) Phys. Rev. Lett , vol.68 , pp. 3805-3808
    • Voss, R.F.1
  • 9
    • 0036904386 scopus 로고    scopus 로고
    • Fractals in DNA sequence analysis
    • Z.G. Yu, A. Vo, Z.M. Gong and S.C. Long, "Fractals in DNA sequence analysis", Chinese Physics, vol 11, pp1313-1318, 2002.
    • (2002) Chinese Physics , vol.11 , pp. 1313-1318
    • Yu, Z.G.1    Vo, A.2    Gong, Z.M.3    Long, S.C.4
  • 10
    • 35348824998 scopus 로고    scopus 로고
    • Studies of Hurst Index for Different Regions of Genes
    • H.D. Liu, Z.H. Liu, X. Sun, "Studies of Hurst Index for Different Regions of Genes", ICBBE 2007, pp238-240, 2007.
    • (2007) ICBBE 2007 , pp. 238-240
    • Liu, H.D.1    Liu, Z.H.2    Sun, X.3
  • 11
    • 31944432339 scopus 로고    scopus 로고
    • A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters
    • S. Saxonov, P. Berg, and D.L. Brutlag, "A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters", Proc. Natl. Acad. Sci. USA, vol 103, pp1412-1417, 2006.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 1412-1417
    • Saxonov, S.1    Berg, P.2    Brutlag, D.L.3
  • 12
    • 0035049521 scopus 로고    scopus 로고
    • Genome-scale compositional comparisonsin eukaryotes
    • A. J. Gentles and S. Karlin, "Genome-scale compositional comparisonsin eukaryotes", Genome Res., vol. 11, pp. 540-546, 2001.
    • (2001) Genome Res , vol.11 , pp. 540-546
    • Gentles, A.J.1    Karlin, S.2
  • 13
    • 0027300694 scopus 로고
    • Nucleotide, dinucleotide and trinucleotide frequencies explain patterns observed in chaos game representations of DNA sequences
    • N. Goldman, "Nucleotide, dinucleotide and trinucleotide frequencies explain patterns observed in chaos game representations of DNA sequences", Nucl. Acids. Res., vol. 21, pp.2478-2491, 1993.
    • (1993) Nucl. Acids. Res , vol.21 , pp. 2478-2491
    • Goldman, N.1
  • 14
    • 35348920125 scopus 로고    scopus 로고
    • CYP3As Phylogeny Based on 2D Graphical Representation of Completed Genomic DNA Sequences
    • K. Dai, "CYP3As Phylogeny Based on 2D Graphical Representation of Completed Genomic DNA Sequences", ICBBE 2007, pp. 215-217.
    • (2007) ICBBE , pp. 215-217
    • Dai, K.1
  • 15
    • 34548587071 scopus 로고    scopus 로고
    • New Invariant of DNA Sequence Based on 3DD-Curves and Its Application on Phylogeny
    • X.Z. Zhang, J.W. Luo, and L. Yang, "New Invariant of DNA Sequence Based on 3DD-Curves and Its Application on Phylogeny", J. Comp. Chem., Vol. 28, pp. 2342-2346, 2007.
    • (2007) J. Comp. Chem , vol.28 , pp. 2342-2346
    • Zhang, X.Z.1    Luo, J.W.2    Yang, L.3
  • 16
    • 35348922931 scopus 로고    scopus 로고
    • Phylogenetic Analysis with a New Distance Measure
    • L.T. Zhang, W.H. Guan, and Z. Yuan, "Phylogenetic Analysis with a New Distance Measure", ICBBE 2007, pp. 306-309.
    • (2007) ICBBE , pp. 306-309
    • Zhang, L.T.1    Guan, W.H.2    Yuan, Z.3
  • 17
    • 35348849121 scopus 로고    scopus 로고
    • A Characteristic Sequences and Normalized Euclidean Distance Based Method for RNA Secondary Structures Comparison
    • S.Q. Han, Z.L. Pei, Q.F. Wang, and X.H. Shi, "A Characteristic Sequences and Normalized Euclidean Distance Based Method for RNA Secondary Structures Comparison", ICBBE 2007, pp. 222-225.
    • (2007) ICBBE , pp. 222-225
    • Han, S.Q.1    Pei, Z.L.2    Wang, Q.F.3    Shi, X.H.4
  • 18
    • 33748675254 scopus 로고    scopus 로고
    • An RNA gene expressed during cortical development evolved rapidly in humans
    • K. S. Pollard, S. R. Salama, N. Lambert, S. Coppens, J. S. Pedersen, et al. "An RNA gene expressed during cortical development evolved rapidly in humans", Nature, vol. 443, pp. 167-172, 2006
    • (2006) Nature , vol.443 , pp. 167-172
    • Pollard, K.S.1    Salama, S.R.2    Lambert, N.3    Coppens, S.4    Pedersen, J.S.5
  • 21
    • 33745134398 scopus 로고    scopus 로고
    • Evolutionary expansion and divergence in the ZNF91 subfamily of primate-specific zinc finger genes
    • A. T. Hamilton, S. Huntley, et al. "Evolutionary expansion and divergence in the ZNF91 subfamily of primate-specific zinc finger genes" Genome Res., vol. 16, pp. 584-594, 2006.
    • (2006) Genome Res , vol.16 , pp. 584-594
    • Hamilton, A.T.1    Huntley, S.2
  • 22
    • 34548232284 scopus 로고    scopus 로고
    • Effect of Mutation Type and Location on Clinical Outcome in 1,013 Probands with Marfan Syndrome or Related Phenotypes and FBN1 Mutations: An International Study
    • L. Faivre, G. Collod-Beroud, B.L. Loeys, et al., "Effect of Mutation Type and Location on Clinical Outcome in 1,013 Probands with Marfan Syndrome or Related Phenotypes and FBN1 Mutations: An International Study", American J. Hum. Gen., vol. 81, pp. 454-466, 2007.
    • (2007) American J. Hum. Gen , vol.81 , pp. 454-466
    • Faivre, L.1    Collod-Beroud, G.2    Loeys, B.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.