Multiple sequence alignment in phylogenetic analysis

Molecular Phylogenetics and Evolution

Volumn 16, Issue 3, 2000, Pages 317-330

  Phillips, Aloysius ^a   Janies, Daniel ^a   Wheeler, Ward ^a  

^a DIVISION OF INVERTEBRATE ZOOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0033775967     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.2000.0785     Document Type: Review

References (59)

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5. The multiple sequence alignment problem in biology
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7. A model of evolutionary change in proteins
8. A method for computing Wagner trees
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12. Optimal sequence alignments
13. On gaps
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15. Optimal sequence alignment allowing for long gaps
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18. A tree reconstruction method that is economical in the number of pairwise comparisons used
19. Unified approach to alignment and phylogenies
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24. A linear space algorithm for computing maximal common subsequences
25. A concern for evidence and a phylogenetic hypothesis of relationships among Epicrates (Boidae Serpentes)
26. Approximate regular expression pattern-matching with concave gap penalties
27. Evolution of the primary and secondary structures of the E1a mRNAs of the adenovirus
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30. The implications of congruence in Menidia
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33. Tree-based maximal likelihood matrices and hidden Markov models
34. Congruence among character sets in phylogenetic studies in the frog genus Leptodactylus
35. Consensus cladograms and general classifications
36. Effects of nucleotide sequence alignment on phylogeny estimation: A case study of 18S rDNAs of Apicomplexa
37. A general method applicable to the search for similarities in the amino acid sequence of two proteins
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48. Finding approximate patterns in strings
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50. Some biological sequence metrics
51. General methods of sequence comparison
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