메뉴 건너뛰기




Volumn 379, Issue 1, 2008, Pages 1-7

Label-free optical detection of aptamer-protein interactions using gold-capped oxide nanostructures

Author keywords

Aptamer applications; Au capped oxide nanostructures; Interferometry; Label free optical biosensor; Localized surface plasmon resonance; PAA layer chip

Indexed keywords

ALUMINA; ALUMINUM OXIDE; ANODIC OXIDATION; BIOMOLECULES; BIOSENSORS; DNA; ENZYMES; INTERFEROMETRY; NANOSTRUCTURES; PLASMONS; PROTEOMICS; SURFACE PLASMON RESONANCE;

EID: 50949085748     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2008.04.029     Document Type: Article
Times cited : (63)

References (53)
  • 1
    • 33644642166 scopus 로고    scopus 로고
    • Why gold nanoparticles are more precious than pretty gold: Noble metal surface plasmon resonance and its enhancement of the radiative and nonradiative properties of nanocrystals of different shapes
    • Eustis S., and el-Sayed M.A. Why gold nanoparticles are more precious than pretty gold: Noble metal surface plasmon resonance and its enhancement of the radiative and nonradiative properties of nanocrystals of different shapes. Chem. Soc. Rev. 35 (2006) 209-217
    • (2006) Chem. Soc. Rev. , vol.35 , pp. 209-217
    • Eustis, S.1    el-Sayed, M.A.2
  • 2
    • 0142075254 scopus 로고    scopus 로고
    • Single silver nanoparticles as real-time optical sensors with zeptomole sensitivity
    • McFarland A.D., and Van Duyne R.P. Single silver nanoparticles as real-time optical sensors with zeptomole sensitivity. Nano Lett. 3 (2003) 1057-1062
    • (2003) Nano Lett. , vol.3 , pp. 1057-1062
    • McFarland, A.D.1    Van Duyne, R.P.2
  • 3
    • 84974687151 scopus 로고
    • Articles on the optical characteristics of turbid tubes, especially colloidal metal solutions
    • Mie G. Articles on the optical characteristics of turbid tubes, especially colloidal metal solutions. Ann. Physik 25 (1908) 377-445
    • (1908) Ann. Physik , vol.25 , pp. 377-445
    • Mie, G.1
  • 4
    • 0042968726 scopus 로고    scopus 로고
    • Surface plasmon subwavelength optics
    • Barnes W.L., Dereux A., and Ebbesen T.W. Surface plasmon subwavelength optics. Nature 424 (2003) 824-830
    • (2003) Nature , vol.424 , pp. 824-830
    • Barnes, W.L.1    Dereux, A.2    Ebbesen, T.W.3
  • 6
    • 3042539529 scopus 로고    scopus 로고
    • John Wiley, New York
    • Prasad N.P. Nanophotonics (2004), John Wiley, New York 129-151
    • (2004) Nanophotonics , pp. 129-151
    • Prasad, N.P.1
  • 9
    • 4544227682 scopus 로고    scopus 로고
    • Label-free biosensing by surface plasmon resonance of nanoparticles on glass: Optimization of nanoparticle size
    • Nath N., and Chilkoti A. Label-free biosensing by surface plasmon resonance of nanoparticles on glass: Optimization of nanoparticle size. Anal. Chem. 76 (2004) 5370-5378
    • (2004) Anal. Chem. , vol.76 , pp. 5370-5378
    • Nath, N.1    Chilkoti, A.2
  • 10
    • 0036469136 scopus 로고    scopus 로고
    • A colorimetric gold nanoparticle sensor to interrogate biomolecular interactions in real time on a surface
    • Nath N., and Chilkoti A. A colorimetric gold nanoparticle sensor to interrogate biomolecular interactions in real time on a surface. Anal. Chem. 74 (2002) 504-509
    • (2002) Anal. Chem. , vol.74 , pp. 504-509
    • Nath, N.1    Chilkoti, A.2
  • 11
    • 0141744810 scopus 로고    scopus 로고
    • Local refractive index dependence of plasmon resonance spectra from individual nanoparticles
    • Mock J.J., Smith D.R., and Schultz S. Local refractive index dependence of plasmon resonance spectra from individual nanoparticles. Nano Lett. 3 (2003) 485-491
    • (2003) Nano Lett. , vol.3 , pp. 485-491
    • Mock, J.J.1    Smith, D.R.2    Schultz, S.3
  • 13
    • 0033890496 scopus 로고    scopus 로고
    • Cap-shaped gold nanoparticles for an optical biosensor
    • Himmelhaus M., and Takei H. Cap-shaped gold nanoparticles for an optical biosensor. Sens. Actuat. B 63 (2000) 24-30
    • (2000) Sens. Actuat. B , vol.63 , pp. 24-30
    • Himmelhaus, M.1    Takei, H.2
  • 14
    • 0345479162 scopus 로고    scopus 로고
    • Surface-based gold-nanoparticle sensor for specific and quantitative DNA hybridization detection
    • Olofsson L., Rindzevicius T., Pfeiffer I., Käll M., and Höök F. Surface-based gold-nanoparticle sensor for specific and quantitative DNA hybridization detection. Langmuir 19 (2003) 10414-10419
    • (2003) Langmuir , vol.19 , pp. 10414-10419
    • Olofsson, L.1    Rindzevicius, T.2    Pfeiffer, I.3    Käll, M.4    Höök, F.5
  • 15
    • 27544436206 scopus 로고    scopus 로고
    • Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor
    • Endo T., Kerman K., Nagatani N., Takamura Y., and Tamiya E. Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor. Anal. Chem. 77 (2005) 6976-6984
    • (2005) Anal. Chem. , vol.77 , pp. 6976-6984
    • Endo, T.1    Kerman, K.2    Nagatani, N.3    Takamura, Y.4    Tamiya, E.5
  • 16
    • 24344441622 scopus 로고    scopus 로고
    • Localized surface plasmon resonance based optical biosensor using surface modified nanoparticle layer for label-free monitoring of antigen-antibody reaction
    • Endo T., Yamamura S., Nagatani N., Morita Y., Takamura Y., and Tamiya E. Localized surface plasmon resonance based optical biosensor using surface modified nanoparticle layer for label-free monitoring of antigen-antibody reaction. Sci. Technol. Adv. Mater. 6 (2005) 491-500
    • (2005) Sci. Technol. Adv. Mater. , vol.6 , pp. 491-500
    • Endo, T.1    Yamamura, S.2    Nagatani, N.3    Morita, Y.4    Takamura, Y.5    Tamiya, E.6
  • 17
    • 33748786553 scopus 로고    scopus 로고
    • Multiple label-free detection of antigen-antibody reaction using localized surface plasmon resonance-based core-shell structured nanoparticle layer nanochip
    • Endo T., Kerman K., Nagatani N., Hiep H.M., Kim D.-K., Yonezawa Y., Nakano K., and Tamiya E. Multiple label-free detection of antigen-antibody reaction using localized surface plasmon resonance-based core-shell structured nanoparticle layer nanochip. Anal. Chem. 78 (2006) 6465-6475
    • (2006) Anal. Chem. , vol.78 , pp. 6465-6475
    • Endo, T.1    Kerman, K.2    Nagatani, N.3    Hiep, H.M.4    Kim, D.-K.5    Yonezawa, Y.6    Nakano, K.7    Tamiya, E.8
  • 18
    • 3042706248 scopus 로고    scopus 로고
    • A localized surface plasmon resonance biosensor: First steps toward an assay for Alzheimer's disease
    • Haes A.J., Hall W.P., Chang L., Klein W.L., and Van Duyne R.P. A localized surface plasmon resonance biosensor: First steps toward an assay for Alzheimer's disease. Nano Lett. 4 (2004) 1029-1034
    • (2004) Nano Lett. , vol.4 , pp. 1029-1034
    • Haes, A.J.1    Hall, W.P.2    Chang, L.3    Klein, W.L.4    Van Duyne, R.P.5
  • 19
    • 17144397997 scopus 로고    scopus 로고
    • Localized surface plasmon resonance sensing of lipid-membrane-mediated biorecognition events
    • Dahlin A., Zäch M., Rindzevicius T., Käll M., Sutherland D.S., and Höök F. Localized surface plasmon resonance sensing of lipid-membrane-mediated biorecognition events. J. Am. Chem. Soc. 127 (2005) 5043-5048
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 5043-5048
    • Dahlin, A.1    Zäch, M.2    Rindzevicius, T.3    Käll, M.4    Sutherland, D.S.5    Höök, F.6
  • 20
    • 28144465612 scopus 로고    scopus 로고
    • Calibration of dynamic molecular rulers based on plasmon coupling between gold nanoparticles
    • Reinhard B.M., Siu M., Agarwal H., Alivisatos A.P., and Liphardt J. Calibration of dynamic molecular rulers based on plasmon coupling between gold nanoparticles. Nano Lett. 5 (2005) 2246-2252
    • (2005) Nano Lett. , vol.5 , pp. 2246-2252
    • Reinhard, B.M.1    Siu, M.2    Agarwal, H.3    Alivisatos, A.P.4    Liphardt, J.5
  • 21
    • 24944503605 scopus 로고    scopus 로고
    • A molecular ruler based on plasmon coupling of single gold and silver nanoparticles
    • Sönnichsen C., Reinhard B.M., Liphardt J., and Alivisatos A.P. A molecular ruler based on plasmon coupling of single gold and silver nanoparticles. Nat. Biotechnol. 23 (2005) 741-745
    • (2005) Nat. Biotechnol. , vol.23 , pp. 741-745
    • Sönnichsen, C.1    Reinhard, B.M.2    Liphardt, J.3    Alivisatos, A.P.4
  • 22
    • 0020139874 scopus 로고
    • Refractive index and absorption detector for liquid chromatography based on Fabry-Perot interferometry
    • Woodruff S.D., and Yeung E.S. Refractive index and absorption detector for liquid chromatography based on Fabry-Perot interferometry. Anal. Chem. 54 (1982) 1174-1178
    • (1982) Anal. Chem. , vol.54 , pp. 1174-1178
    • Woodruff, S.D.1    Yeung, E.S.2
  • 23
    • 11444266196 scopus 로고    scopus 로고
    • Label-free molecular interaction determinations with nanoscale interferometry
    • Markov D.A., Swinney K., and Bornhop D.J. Label-free molecular interaction determinations with nanoscale interferometry. J. Am. Chem. Soc. 126 (2004) 16659-16664
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 16659-16664
    • Markov, D.A.1    Swinney, K.2    Bornhop, D.J.3
  • 24
    • 0033199750 scopus 로고    scopus 로고
    • A porous silicon optical biosensor: Detection of reversible binding of IgG to a protein A-modified surface
    • Dancil K.-P.S., Greiner D.P., and Sailor M.J. A porous silicon optical biosensor: Detection of reversible binding of IgG to a protein A-modified surface. J. Am. Chem. Soc. 121 (1999) 7925-7930
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 7925-7930
    • Dancil, K.-P.S.1    Greiner, D.P.2    Sailor, M.J.3
  • 26
    • 0141632990 scopus 로고    scopus 로고
    • Interferometric sensing of biomolecular binding using nanoporous aluminum oxide templates
    • Pan S., and Rothberg L.J. Interferometric sensing of biomolecular binding using nanoporous aluminum oxide templates. Nano Lett. 3 (2003) 811-814
    • (2003) Nano Lett. , vol.3 , pp. 811-814
    • Pan, S.1    Rothberg, L.J.2
  • 27
    • 35448974083 scopus 로고    scopus 로고
    • Label-free sensing of binding to microarrays using Brewster angle straddle interferometry
    • Gao T., and Rothberg L.J. Label-free sensing of binding to microarrays using Brewster angle straddle interferometry. Anal. Chem. 79 (2007) 7589-7595
    • (2007) Anal. Chem. , vol.79 , pp. 7589-7595
    • Gao, T.1    Rothberg, L.J.2
  • 28
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington A.D., and Szostak J.W. In vitro selection of RNA molecules that bind specific ligands. Nature 346 (1990) 818-822
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 29
    • 0025194307 scopus 로고
    • Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
    • Tuerk C., and Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 249 (1990) 505-510
    • (1990) Science , vol.249 , pp. 505-510
    • Tuerk, C.1    Gold, L.2
  • 30
    • 0032853242 scopus 로고    scopus 로고
    • In vitro selection of functional nucleic acids
    • Wilson D.S., and Szostak J.W. In vitro selection of functional nucleic acids. Annu. Rev. Biochem. 68 (1999) 611-647
    • (1999) Annu. Rev. Biochem. , vol.68 , pp. 611-647
    • Wilson, D.S.1    Szostak, J.W.2
  • 31
    • 33645235066 scopus 로고    scopus 로고
    • Optimization of aptamer microarray technology for multiple protein targets
    • Cho E.J., Collett J.R., Szafranska A.E., and Ellington A.D. Optimization of aptamer microarray technology for multiple protein targets. Anal. Chim. Acta 564 (2006) 82-90
    • (2006) Anal. Chim. Acta , vol.564 , pp. 82-90
    • Cho, E.J.1    Collett, J.R.2    Szafranska, A.E.3    Ellington, A.D.4
  • 32
    • 33645225909 scopus 로고    scopus 로고
    • Selection of aptamers by systematic evolution of ligands by exponential enrichment: Addressing the polymerase chain reaction issue
    • Musheev M.U., and Krylov S.N. Selection of aptamers by systematic evolution of ligands by exponential enrichment: Addressing the polymerase chain reaction issue. Anal. Chim. Acta 564 (2006) 91-96
    • (2006) Anal. Chim. Acta , vol.564 , pp. 91-96
    • Musheev, M.U.1    Krylov, S.N.2
  • 33
    • 0032860385 scopus 로고    scopus 로고
    • Aptamers: An emerging class of molecules that rival antibodies in diagnostics
    • Jayasena S.D. Aptamers: An emerging class of molecules that rival antibodies in diagnostics. Clin. Chem. 45 (1999) 1628-1650
    • (1999) Clin. Chem. , vol.45 , pp. 1628-1650
    • Jayasena, S.D.1
  • 35
    • 23944515324 scopus 로고    scopus 로고
    • Aptamer-based biosensors for the detection of HIV-1 Tat protein
    • Tombelli S., Minunni M., Luzi E., and Mascini M. Aptamer-based biosensors for the detection of HIV-1 Tat protein. Bioelectrochemistry 67 (2005) 135-141
    • (2005) Bioelectrochemistry , vol.67 , pp. 135-141
    • Tombelli, S.1    Minunni, M.2    Luzi, E.3    Mascini, M.4
  • 36
    • 18644363565 scopus 로고    scopus 로고
    • Fluorescence detection of DNA by the catalytic activation of an aptamer/thrombin complex
    • Pavlov V., Shlyahovsky B., and Willner I. Fluorescence detection of DNA by the catalytic activation of an aptamer/thrombin complex. J. Am. Chem. Soc. 127 (2005) 6522-6523
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 6522-6523
    • Pavlov, V.1    Shlyahovsky, B.2    Willner, I.3
  • 37
    • 4644361133 scopus 로고    scopus 로고
    • Aptamer-functionalized Au nanoparticles for the amplified optical detection of thrombin
    • Pavlov V., Xiao Y., Shlyahovsky B., and Willner I. Aptamer-functionalized Au nanoparticles for the amplified optical detection of thrombin. J. Am. Chem. Soc. 126 (2004) 11768-11769
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 11768-11769
    • Pavlov, V.1    Xiao, Y.2    Shlyahovsky, B.3    Willner, I.4
  • 38
    • 33645695504 scopus 로고    scopus 로고
    • Nucleic acid-functionalized Pt nanoparticles: Catalytic labels for the amplified electrochemical detection of biomolecules
    • Polsky R., Gill R., Kaganovsky L., and Willner I. Nucleic acid-functionalized Pt nanoparticles: Catalytic labels for the amplified electrochemical detection of biomolecules. Anal. Chem. 78 (2006) 2268-2271
    • (2006) Anal. Chem. , vol.78 , pp. 2268-2271
    • Polsky, R.1    Gill, R.2    Kaganovsky, L.3    Willner, I.4
  • 39
    • 33744934230 scopus 로고    scopus 로고
    • Following aptamer-thrombin binding by force measurements
    • Basnar B., Elnathan R., and Willner I. Following aptamer-thrombin binding by force measurements. Anal. Chem. 78 (2006) 3638-3642
    • (2006) Anal. Chem. , vol.78 , pp. 3638-3642
    • Basnar, B.1    Elnathan, R.2    Willner, I.3
  • 41
    • 0026575221 scopus 로고
    • Selection of single-stranded DNA molecules that bind and inhibit human thrombin
    • Bock L.C., Griffin L.C., Lathan J.A., Vermaas E.H., and Toole J.J. Selection of single-stranded DNA molecules that bind and inhibit human thrombin. Nature 355 (1992) 564-566
    • (1992) Nature , vol.355 , pp. 564-566
    • Bock, L.C.1    Griffin, L.C.2    Lathan, J.A.3    Vermaas, E.H.4    Toole, J.J.5
  • 42
    • 0027467617 scopus 로고
    • Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution
    • Macaya R.F., Schultze P., Smith F.W., Roe J.A., and Feigon J. Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution. Proc. Natl. Acad. Sci. USA 90 (1993) 3745-3749
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 3745-3749
    • Macaya, R.F.1    Schultze, P.2    Smith, F.W.3    Roe, J.A.4    Feigon, J.5
  • 43
    • 0028318093 scopus 로고
    • Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG)
    • Schultze P., Macaya R.F., and Feigon J.J. Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG). J. Mol. Biol. 235 (1994) 1532-1547
    • (1994) J. Mol. Biol. , vol.235 , pp. 1532-1547
    • Schultze, P.1    Macaya, R.F.2    Feigon, J.J.3
  • 45
    • 18144364332 scopus 로고    scopus 로고
    • Ability of thrombin to act as molecular chaperone, including formation of quadruplex structure of thrombin-binding aptamer
    • Baldrich E., and O'Sullivan C.K. Ability of thrombin to act as molecular chaperone, including formation of quadruplex structure of thrombin-binding aptamer. Anal. Biochem. 341 (2005) 194-197
    • (2005) Anal. Biochem. , vol.341 , pp. 194-197
    • Baldrich, E.1    O'Sullivan, C.K.2
  • 46
    • 11144269746 scopus 로고    scopus 로고
    • NMR study of the folding-unfolding mechanism for the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG)
    • Mao X.-A., and Gmeiner W.H. NMR study of the folding-unfolding mechanism for the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG). Biophys. Chem. 113 (2005) 155-160
    • (2005) Biophys. Chem. , vol.113 , pp. 155-160
    • Mao, X.-A.1    Gmeiner, W.H.2
  • 47
    • 0029733028 scopus 로고    scopus 로고
    • Fabrication of gold nanodot array using anodic porous alumina as an evaporation mask
    • Masuda H., and Satoh M. Fabrication of gold nanodot array using anodic porous alumina as an evaporation mask. Jpn. J. Appl. Phys. 35 (1996) 126-129
    • (1996) Jpn. J. Appl. Phys. , vol.35 , pp. 126-129
    • Masuda, H.1    Satoh, M.2
  • 48
    • 0031563773 scopus 로고    scopus 로고
    • Oligonucleotide inhibitors of human thrombin that bind distinct epitopes
    • Tasset D.M., Kubik M.F., and Steiner W. Oligonucleotide inhibitors of human thrombin that bind distinct epitopes. J. Mol. Biol. 272 (1997) 688-698
    • (1997) J. Mol. Biol. , vol.272 , pp. 688-698
    • Tasset, D.M.1    Kubik, M.F.2    Steiner, W.3
  • 49
    • 0038167143 scopus 로고    scopus 로고
    • Aptamer-based biosensor arrays for detection and quantification of biological molecules
    • McCauley G.T., Hamaguchi N., and Stanton M. Aptamer-based biosensor arrays for detection and quantification of biological molecules. Anal. Chem. 319 (2003) 244-250
    • (2003) Anal. Chem. , vol.319 , pp. 244-250
    • McCauley, G.T.1    Hamaguchi, N.2    Stanton, M.3
  • 51
    • 0141829166 scopus 로고    scopus 로고
    • Piezoelectric quartz crystal sensor applied for bioanalytical assay and characterization of affinity interactions
    • Skladal P. Piezoelectric quartz crystal sensor applied for bioanalytical assay and characterization of affinity interactions. J. Braz. Chem. Soc. 14 (2003) 491-502
    • (2003) J. Braz. Chem. Soc. , vol.14 , pp. 491-502
    • Skladal, P.1
  • 52
    • 33845680548 scopus 로고    scopus 로고
    • Influence of ionic strength, pH, and aptamer configuration for binding affinity to thrombin
    • Hianik T., Ostatna V., Sonlajtnerova M., and Grman I. Influence of ionic strength, pH, and aptamer configuration for binding affinity to thrombin. Bioelectrochemistry 70 (2007) 127-133
    • (2007) Bioelectrochemistry , vol.70 , pp. 127-133
    • Hianik, T.1    Ostatna, V.2    Sonlajtnerova, M.3    Grman, I.4
  • 53
    • 34548634732 scopus 로고    scopus 로고
    • Surface plasmon resonance spectroscopy study of interfacial binding of thrombin to antithrombin DNA aptamers
    • Tang Q., Su X., and Loh K.P. Surface plasmon resonance spectroscopy study of interfacial binding of thrombin to antithrombin DNA aptamers. J. Coll. Interface Sci. 315 (2007) 99-106
    • (2007) J. Coll. Interface Sci. , vol.315 , pp. 99-106
    • Tang, Q.1    Su, X.2    Loh, K.P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.