Label-free DNA biosensor based on localized surface plasmon resonance coupled with interferometry

Analytical Chemistry

Volumn 79, Issue 5, 2007, Pages 1855-1864

  Kim, Do Kyun ^a   Kerman, Kagan ^a   Saito, Masato ^a   Sathuluri, Ramachandra Rao ^a   Endo, Tatsuro ^b   Yamamura, Shohei ^a   Kwon, Young Soo ^c   Tamiya, Eiichi ^a  

^a JAPAN ADVANCED INSTITUTE OF SCIENCE AND TECHNOLOGY   (Japan)

^b TOKYO INSTITUTE OF TECHNOLOGY   (Japan)

^c Dong A University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ALUMINA; DNA; INTERFEROMETRY; LIGHT REFLECTION; NANOSTRUCTURES; OLIGONUCLEOTIDES; SURFACE PLASMON RESONANCE;

HYBRIDIZATION; OPTICAL BIOSENSORS; POROUS ANODIC ALUMINA (PAA); RELATIVE REFLECTED INTENSITY (RRI);

BIOSENSORS;

ALUMINUM OXIDE; DNA; GOLD; OLIGONUCLEOTIDE;

ANALYTIC METHOD; ARTICLE; BIOSENSOR; DNA HYBRIDIZATION; GENE AMPLIFICATION; INTERFEROMETRY; MOLECULAR INTERACTION; POLYMERASE CHAIN REACTION; POROSITY; SURFACE PLASMON RESONANCE; SURFACE PROPERTY; THICKNESS;

BIOSENSING TECHNIQUES; DNA; HUMANS; INTERFEROMETRY; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SURFACE PLASMON RESONANCE;

EID: 33847616125     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac061909o     Document Type: Article

References (65)

1. Pattnaik, P. Appl. Biochem. Biotechnol. 2005, 126, 79-92.
2. Lahiri, J.; Isaacs, L.; Tien, J.; Whitesides, G. M. Anal. Chem. 1999, 71, 777-790.
3. Nakamura, R.; Muguruma, H.; Ikebukuro, K.; Sasaki, S.; Nagata, R.; Karube, I.; Pedersen, H. Anal. Chem. 1997, 69, 4649-4652.
4. Kai, E.; Sawata, S.; Ikebukuro, K.; Iida, T.; Honda, T.; Karube, I. Anal. Chem. 1999, 71, 796-800.
5. Jordan, C. E.; Frutos, A. G.; Thiel, A. G.; Corn, R. M. Anal. Chem. 1997, 69, 4939-4947.
6. Goodrich, T. T.; Lee, H. J.; Corn, R. M. J. Am. Chem. Soc. 2004, 126, 4086-4087.
7. Goodrich, T. T.; Lee, H. J.; Corn, R. M., Anal. Chem. 2004, 76, 6173-6178.
8. Wark, A. W.; Lee, H. J.; Corn, R. M. Anal. Chem. 2005, 77, 3904-3907.
9. Lee, H. J.; Li, Y.; Wark, A. W.; Corn, R. M. Anal. Chem. 2005, 77, 5096-5100.
10. Woodruff, S. D.; Yeung, E. S. Anal. Chem. 1982, 54, 1174-1178.
11. Tarigan, H. J.; Neill, P.; Kenmore, C. K.; Bornhop, D. J. Anal. Chem. 1996, 68, 1762-1770.
12. Swinney, K.; Markov, D.; Bornhop, D. J. Anal. Chem. 2000, 72, 2690-2695.
13. Wang, Z.; Bornhop, D. J. Anal. Chem. 2005, 77, 7872-7877.
14. Markov, D. A.; Swinney, K.; Bornhop, D. J. J. Am. Chem. Soc. 2004, 126, 16659-16664.
15. Dancil, K.-P. S.; Greiner, D. P.; Sailor, M. J. J. Am. Chem. Soc. 1999, 121, 7925-7930.
16. Butler, M. A. Appl. Phys. Lett. 1984, 45, 1007.
17. Balconi, L.; Martinelli, M.; Sigon, F.; Vegetti, G. Proc. Control Qual. 1992, 107.
18. Lin, V. S.-Y.; Motesharei, K.; Dancil, K.-P. S.; Sailor, M. J.; Ghadiri, M. R. Science 1997, 278, 840-843.
19. Doan, V. V.; Sailor, M. J. Science 1992, 256, 1791-1792.
20. Boussaad, S.; Pean, J.; Tao, N. J. Anal. Chem. 2000, 72, 222-226.
21. Sola, H.; Hasegawa, Y.; Iwakura, M. Anal. Chem. 1998, 70, 2019-2024.
22. Lu, J.; Strohsahl, C. M.; Miller, B. L.; Rothberg, L. J. Anal. Chem. 2004, 76, 4416-4420.
23. Pan, S.; Rothberg, L. J. Natto Lett. 2003, 3, 811-814.
24. Gao, T.; Lu, J.; Rothberg, L. J. Anal. Chem. 2006, 78, 6622-6627.
25. Horner, S. R.; Mace, C. R.; Rothberg, L. J.; Miller, B. L. Biosens. Bioelectron. 2006, 21, 1659-1663.
26. Nikitin, P. I.; Grigorenko, A. N.; Beloglazov, A. A.; Valeiko, M. V.; Savchuk, A. I.; Savchuk, O. A.; Steiner, G.; Kühne, C.; Huebner, A.; Salzer, R. Sens. Actuators, A 2000, 85, 189-193.
27. Wu, C.-M.; Jian, Z.-C.; Joe, S.-F.; Chang, L.-B. Sens. Actuators 2003, 92, 133-136.
28. Alieva, E. V.; Konopsky, V. N. Sens. Actuators 2004, 99, 90-97.
29. Ince, R.; Narayanaswamy, R. Anal. Chim. Acta 2006, 569, 1-20.
30. Eustis, S.; el-Sayed, M. A. Chem. Soc. Rev. 2006, 35, 209-217.
31. McFarland, A. D.; Van Duyne, R. P. Nano Lett. 2003, 3, 1057-1062.
32. Mie, G. Ann. Phys. 1908, 25, 377-445.
33. Barnes, W. L.; Dereux, A.; Ebbesen, T. W. Nature 2003, 424, 824-830.
34. Kreibig, U.; Vollmer, M. Optical properties of metal clusters; Springer-Verlag: Heidelberg, Germany, 1995.
35. Prasad, N. P. Nanophotonics; Wiley-Interscience: Hoboken, NJ, 2004; pp 129-151.
36. Stuart, D. A.; Haes, A. J.; Yonzon, C. R.; Hicks, E. M.; Van Duyne, R. P. IEE Proc. Nanobiotechnol. 2005, 152, 13-32.
37. Freeman, R. G.; Grabar, K. C.; Allison, K. J.; Bright, R. M.; Davis, J. A.; Guthrie, A. P.; Hommer, M. B.; Jackson, M. A.; Smith, P. C.; Walter, D. G.; Natan, M. J. Science 1995, 267, 1629-1632.
38. Nath, N.; Chilkoti, A. Anal. Chem. 2004, 76, 5370-5378.
39. Nath, N.; Chilkoti, A. Anal. Chem. 2002, 74, 504-509.
40. Mock, J. J.; Smith, D. R.; Schultz, S. Nano Lett. 2003, 3, 485-491.
41. Raschke, G.; Kowarik, S.; Franzl, T.; Sönnichsen, C.; Klar, T. A.; Feldmann, J.; Nichtl, A.; Kürzinger, K. Nano Lett. 2003, 3, 935-938.
42. Himmelhaus, M.; Takei, H. Sens. Actuators, B 2000, 63, 24-30.
43. Olofsson, L.; Rindzevicius, T.; Pfeiffer, I.; Kail, M.; Höök, F. Langmuir 2003, 19, 10414-10419.
44. Endo, T.; Kerman, K.; Nagatani, N.; Takamura, Y.; Tamiya, E. Anal. Chem. 2005, 77, 6976-6984.
45. Endo, T.; Yamamura, S.; Nagatani, N.; Morita, Y.; Takamura, Y.; Tamiya, E. Sci. Technol. Adv. Mater. 2005, 6, 491-500.
46. Endo, T.; Kerman, K.; Nagatani, N.; Hiep, H. M.; Kim, D.-K.; Yonezawa, Y.; Nakano, K.; Tamiya, E. Anal. Chem. 2006, 78, 6465-6467.
47. Haes, A. J.; Hall, W. P.; Chang, L.; Klein, W. L.; Van Duyne, R. P. Nano Lett. 2004, 4, 1029-1034.
48. Dahlin, A.; Zäch, M.; Rindzevicius, T.; Kail, M.; Sutherland, D. S.; Höök, F. J. Am. Chem. Soc. 2005, 127, 5043-5048.
49. Dahlin, B. A.; Tegenfeldt, J. O.; Höök, F. Anal. Chem. 2006, 78, 4416-4423.
50. Dahlin, A.; Zäch, M.; Rindzevicius, T.; Käll, M.; Sutherland, D. S.; Höök, F. J. Am. Chem. Soc. 2005, 127, 5043-5048.
51. Reinhard, B. M.; Siu, M.; Agarwal, H.; Alivisatos, A. P.; Liphardt, J. Nano Lett. 2005, 5, 2246-2252.
52. Sönnichsen, C.; Reinhard, B. M.; Liphardt, J.; Alivisatos, A. P. Nat. Biotechnol. 2005, 23, 741-745.
53. Lin, T.-J.; Huang, K.-T.; Liu, C.-Y. Biosens. Bioelectron. 2006, 22, 513-518.
54. Chau, L.-K.; Lin, Y.-F.; Cheng, S.-F.; Lin, T.-J. Sens. Actuators 2006, 113, 100-105.
55. Fujiwara, K.; Watarai, H.; Itoh, H.; Nakahama, E.; Ogawa, N. Anal. Bioanal. Chem. 2006, 386, 639-644.
56. Liu, G. L.; Yin, Y.; Kunchakarra, S.; Mukherjee, B.; Gerion, D.; Jett, S. D.; Bear, D. G.; Gray, J. W.; Alivisatos, A. P.; Lee, L. P.; Chen, F. F. Nat. Nanotechnol. 2006, 1, 47-52.
57. Masuda, H.; Satoh, M. Jpn. J. Appl. Phys. 1996, 35, 126-129.
58. Corder, E. H.; Saunders, A. M.; Strittmatter, W. J.; Schmechel, D. E.; Gaskell, P. C.; Small, G. W.; Roses, A. D.; Haines, J. L.; Pericak-Vance, M. A. Science 1993, 267, 921-923.
59. Saunders, A. M.; Strittmatter, W. J.; Schmechel, D.; George-Hyslop, P. H.; Pericak-Vance, M. A.; Joo, S. H.; Rosi, B. L.; Gusella, J. F.; Crapper-MacLachlan, D. R.; Alberts, M. J. Neurology 1993, 43, 1467-1472.
60. Hixon, J. E.; Vernier, D. T. J. Lipid Res. 1990, 31, 545-548.
61. Laitinen, J.; Samarut, J.; Holtta, E. Biotechniques 1994, 17, 316-322.
62. Marrazza, G.; Chiti, G.; Mascini, M.; Anichini, M. Clin. Chem. 2000, 46, 31-37.
63. Sui, Y. C.; Saniger, J. M. Mater. Lett. 2001, 48, 127-136.
64. Templeton, A. C.; Pietron, J. J.; Murray, R. W.; Mulvaney, P. J. Phys. Chem. B 2000, 104, 564-570.
65. Mulvaney, P. Langmuir 1996, 12, 788-800.