-
2
-
-
37649005234
-
Autophagy in the pathogenesis of disease
-
Levine B and Kroemer G. Autophagy in the pathogenesis of disease. Cell 2008; 132:27-42.
-
(2008)
Cell
, vol.132
, pp. 27-42
-
-
Levine, B.1
Kroemer, G.2
-
3
-
-
27644548194
-
Pathogens and autophagy: Subverting to survive
-
Colombo MI. Pathogens and autophagy: subverting to survive. Cell Death Differ 2005; 12:1481-3.
-
(2005)
Cell Death Differ
, vol.12
, pp. 1481-1483
-
-
Colombo, M.I.1
-
4
-
-
21344452171
-
Subversion of cellular autophagosomal machinery by RNA viruses
-
Jackson WT, et al. Subversion of cellular autophagosomal machinery by RNA viruses. PLoS Biol 2005; 3:156.
-
(2005)
PLoS Biol
, vol.3
, pp. 156
-
-
Jackson, W.T.1
-
5
-
-
35448938087
-
Essential role for autophagy protein Atg7 in the maintenance of axonal homeostasis and the prevention of axonal degeneration
-
Komatsu M, et al. Essential role for autophagy protein Atg7 in the maintenance of axonal homeostasis and the prevention of axonal degeneration. Proc Natl Acad Sci USA 2007; 104:14489-94.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 14489-14494
-
-
Komatsu, M.1
-
6
-
-
34250183177
-
HDAC6 rescues neurodegeneration and provides an essential link between autophagy and the UPS
-
Pandey UB, et al. HDAC6 rescues neurodegeneration and provides an essential link between autophagy and the UPS. Nature 2007; 447:859-63.
-
(2007)
Nature
, vol.447
, pp. 859-863
-
-
Pandey, U.B.1
-
7
-
-
33745201600
-
Neurodegeneration: Good riddance to bad rubbish
-
Klionsky DJ. Neurodegeneration: good riddance to bad rubbish. Nature 2006; 441:819-20.
-
(2006)
Nature
, vol.441
, pp. 819-820
-
-
Klionsky, D.J.1
-
8
-
-
33745713171
-
Autophagy promotes tumor cell survival and restricts necrosis, inflammation, and tumorigenesis
-
Degenhardt K, et al. Autophagy promotes tumor cell survival and restricts necrosis, inflammation, and tumorigenesis. Cancer Cell 2006; 10:51-64.
-
(2006)
Cancer Cell
, vol.10
, pp. 51-64
-
-
Degenhardt, K.1
-
9
-
-
34249863298
-
Autophagy suppresses tumor progression by limiting chromosomal instability
-
Mathew R, et al. Autophagy suppresses tumor progression by limiting chromosomal instability. Genes Dev 2007; 21:1367-81.
-
(2007)
Genes Dev
, vol.21
, pp. 1367-1381
-
-
Mathew, R.1
-
10
-
-
34848899280
-
Bif-1 interacts with Beclin 1 through UVRAG and regulates autophagy and tumorigenesis
-
Takahashi Y, et al. Bif-1 interacts with Beclin 1 through UVRAG and regulates autophagy and tumorigenesis. Nat Cell Biol 2007; 9:1142-51.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 1142-1151
-
-
Takahashi, Y.1
-
11
-
-
0346998038
-
Defective autophagy leads to cancer
-
Edinger AL and Thompson CB. Defective autophagy leads to cancer. Cancer Cell 2003; 4:422-4.
-
(2003)
Cancer Cell
, vol.4
, pp. 422-424
-
-
Edinger, A.L.1
Thompson, C.B.2
-
12
-
-
0000906170
-
Induction of autophagy and inhibition of tumorigenesis by beclin 1
-
Liang XH, et al. Induction of autophagy and inhibition of tumorigenesis by beclin 1. Nature 1999; 402:672-6.
-
(1999)
Nature
, vol.402
, pp. 672-676
-
-
Liang, X.H.1
-
13
-
-
37549056216
-
The roles of therapy-induced autophagy and necrosis in cancer treatment
-
Amaravadi RK and Thompson CB. The roles of therapy-induced autophagy and necrosis in cancer treatment. Clin Cancer Res 2007; 13:7271-9.
-
(2007)
Clin Cancer Res
, vol.13
, pp. 7271-7279
-
-
Amaravadi, R.K.1
Thompson, C.B.2
-
14
-
-
84934441413
-
Methods for assessing autophagy and autophagic cell death
-
Tasdemir E, et al. Methods for assessing autophagy and autophagic cell death. Methods Mol Biol 2008; 445:29-76.
-
(2008)
Methods Mol Biol
, vol.445
, pp. 29-76
-
-
Tasdemir, E.1
-
15
-
-
34248583762
-
Methods for monitoring autophagy from yeast to human
-
Klionsky DJ, Cuervo AM and Seglen PO. Methods for monitoring autophagy from yeast to human. Autophagy 2007; 3:181-206.
-
(2007)
Autophagy
, vol.3
, pp. 181-206
-
-
Klionsky, D.J.1
Cuervo, A.M.2
Seglen, P.O.3
-
16
-
-
4344712684
-
Methods for monitoring autophagy
-
Mizushima N. Methods for monitoring autophagy. Int J Biochem Cell Biol 2004; 36:2491-502.
-
(2004)
Int J Biochem Cell Biol
, vol.36
, pp. 2491-2502
-
-
Mizushima, N.1
-
17
-
-
38949108670
-
Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes
-
Klionsky DJ, et al. Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes. Autophagy 2008; 4:151-75.
-
(2008)
Autophagy
, vol.4
, pp. 151-175
-
-
Klionsky, D.J.1
-
18
-
-
34848886914
-
Autophagosome formation: Core machinery and adaptations
-
Xie Z and Klionsky DJ. Autophagosome formation: core machinery and adaptations. Nat Cell Biol 2007; 9:1102-9.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 1102-1109
-
-
Xie, Z.1
Klionsky, D.J.2
-
19
-
-
35448981935
-
Autophagy: From phenomenology to molecular understanding in less than a decade
-
Klionsky DJ. Autophagy: from phenomenology to molecular understanding in less than a decade. Nat Rev Mol Cell Biol 2007; 8:931-7.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 931-937
-
-
Klionsky, D.J.1
-
20
-
-
47149091700
-
A pathway sensor for genome-wide screens of intracellular proteolytic cleavage
-
Ketteler R, Sun Z, Kovacs KF, He WW and Seed B. A pathway sensor for genome-wide screens of intracellular proteolytic cleavage. Genome Biol 2008; 9:64.
-
(2008)
Genome Biol
, vol.9
, pp. 64
-
-
Ketteler, R.1
Sun, Z.2
Kovacs, K.F.3
He, W.W.4
Seed, B.5
-
21
-
-
0014359297
-
Studies on cellular autophagocytosis. The formation of autophagic vacuoles in the liver after glucagon administration
-
Arstila AU and Trump BF. Studies on cellular autophagocytosis. The formation of autophagic vacuoles in the liver after glucagon administration. Am J Pathol 1968; 53:687-733.
-
(1968)
Am J Pathol
, vol.53
, pp. 687-733
-
-
Arstila, A.U.1
Trump, B.F.2
-
22
-
-
0014452311
-
Autophagocytosis: Origin of membrane and hydrolytic enzymes
-
Arstila AU and Trump BF. Autophagocytosis: origin of membrane and hydrolytic enzymes. Virchows Arch B Cell Pathol 1969; 2:85-90.
-
(1969)
Virchows Arch B Cell Pathol
, vol.2
, pp. 85-90
-
-
Arstila, A.U.1
Trump, B.F.2
-
23
-
-
43049138051
-
Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease
-
Kraft C, Deplazes A, Sohrmann M and Peter M. Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease. Nat Cell Biol 2008; 10:602-10.
-
(2008)
Nat Cell Biol
, vol.10
, pp. 602-610
-
-
Kraft, C.1
Deplazes, A.2
Sohrmann, M.3
Peter, M.4
-
24
-
-
0034757896
-
A novel assay to study autophagy: Regulation of autophagosome vacuole size by amino acid deprivation
-
Munafo DB and Colombo MI. A novel assay to study autophagy: regulation of autophagosome vacuole size by amino acid deprivation. J Cell Sci 2001; 114:3619-29.
-
(2001)
J Cell Sci
, vol.114
, pp. 3619-3629
-
-
Munafo, D.B.1
Colombo, M.I.2
-
25
-
-
0028836002
-
Monodansylcadaverine (MDC) is a specific in vivo marker for autophagic vacuoles
-
Biederbick A, Kern HF and Elsasser HP. Monodansylcadaverine (MDC) is a specific in vivo marker for autophagic vacuoles. Eur J Cell Biol 1995; 66:3-14.
-
(1995)
Eur J Cell Biol
, vol.66
, pp. 3-14
-
-
Biederbick, A.1
Kern, H.F.2
Elsasser, H.P.3
-
26
-
-
19444370899
-
Visualization of autophagy in Arabidopsis using the fluorescent dye monodansylcadaverine and a GFP-AtATG8e fusion protein
-
Contento AL, Xiong Y and Bassham DC. Visualization of autophagy in Arabidopsis using the fluorescent dye monodansylcadaverine and a GFP-AtATG8e fusion protein. Plant J 2005; 42:598-608.
-
(2005)
Plant J
, vol.42
, pp. 598-608
-
-
Contento, A.L.1
Xiong, Y.2
Bassham, D.C.3
-
27
-
-
33645652024
-
Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP and GATE-16
-
Sou YS, Tanida I, Komatsu M, Ueno T and Kominami E. Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP and GATE-16. J Biol Chem 2006; 281:3017-24.
-
(2006)
J Biol Chem
, vol.281
, pp. 3017-3024
-
-
Sou, Y.S.1
Tanida, I.2
Komatsu, M.3
Ueno, T.4
Kominami, E.5
-
28
-
-
0034329418
-
LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing
-
Kabeya Y, et al. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. Embo J 2000; 19:5720-8.
-
(2000)
Embo J
, vol.19
, pp. 5720-5728
-
-
Kabeya, Y.1
-
29
-
-
0036017758
-
Induction of autophagy causes dramatic changes in the subcellular distribution of GFP-Rab24
-
Munafo DB and Colombo MI. Induction of autophagy causes dramatic changes in the subcellular distribution of GFP-Rab24. Ttaffic 2002; 3:472-82.
-
(2002)
Ttaffic
, vol.3
, pp. 472-482
-
-
Munafo, D.B.1
Colombo, M.I.2
-
30
-
-
34447276502
-
Human WIPI-1 puncta-formation: A novel assay to assess mammalian autophagy
-
Proikas-Cezanne T, Ruckerbauer S, Stierhof YD, Berg C and Nordheim A. Human WIPI-1 puncta-formation: a novel assay to assess mammalian autophagy. FEBS Lett 2007; 581:3396-404.
-
(2007)
FEBS Lett
, vol.581
, pp. 3396-3404
-
-
Proikas-Cezanne, T.1
Ruckerbauer, S.2
Stierhof, Y.D.3
Berg, C.4
Nordheim, A.5
-
31
-
-
35848949567
-
Non-autophagic GFP-LC3 puncta induced by saponin and other detergents
-
Ciechomska IA and Tolkovsky AM. Non-autophagic GFP-LC3 puncta induced by saponin and other detergents. Autophagy 2007; 3:586-90.
-
(2007)
Autophagy
, vol.3
, pp. 586-590
-
-
Ciechomska, I.A.1
Tolkovsky, A.M.2
-
32
-
-
34250900953
-
-
Kuma A, Matsui M and Mizushima N. LC3, an autophagosome marker, can be incorporated into protein aggregates independent of autophagy: caution in the interpretation of LC3 localization. Autophagy 2007; 3:323-8.
-
Kuma A, Matsui M and Mizushima N. LC3, an autophagosome marker, can be incorporated into protein aggregates independent of autophagy: caution in the interpretation of LC3 localization. Autophagy 2007; 3:323-8.
-
-
-
-
33
-
-
34548077575
-
Dissection of the autophagosome maturation process by a novel reporter protein, tandem fluorescent-tagged LC3
-
Kimura S, Noda T and Yoshimori T. Dissection of the autophagosome maturation process by a novel reporter protein, tandem fluorescent-tagged LC3. Autophagy 2007; 3:452-60.
-
(2007)
Autophagy
, vol.3
, pp. 452-460
-
-
Kimura, S.1
Noda, T.2
Yoshimori, T.3
-
34
-
-
38049050178
-
Consideration about negative controls for LC3 and expression vectors for four colored fluorescent protein-LC3 negative controls
-
Tanida I, et al. Consideration about negative controls for LC3 and expression vectors for four colored fluorescent protein-LC3 negative controls. Autophagy 2008; 4:131-4.
-
(2008)
Autophagy
, vol.4
, pp. 131-134
-
-
Tanida, I.1
-
35
-
-
1542283812
-
In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker
-
Mizushima N, Yamamoto A, Matsui M, Yoshimori T and Ohsumi Y. In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker. Mol Biol Cell 2004; 15:1101-11.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 1101-1111
-
-
Mizushima, N.1
Yamamoto, A.2
Matsui, M.3
Yoshimori, T.4
Ohsumi, Y.5
-
36
-
-
35848957932
-
Cytosolic LC3 ratio as a sensitive index of macroautophagy in isolated rat hepatocytes and H4-II-E cells
-
Karim MR, et al. Cytosolic LC3 ratio as a sensitive index of macroautophagy in isolated rat hepatocytes and H4-II-E cells. Autophagy 2007; 3:553-60.
-
(2007)
Autophagy
, vol.3
, pp. 553-560
-
-
Karim, M.R.1
-
37
-
-
35848967804
-
How to interpret LC3 immunoblotting
-
Mizushima N and Yoshimori T. How to interpret LC3 immunoblotting. Autophagy 2007; 3:542-5.
-
(2007)
Autophagy
, vol.3
, pp. 542-545
-
-
Mizushima, N.1
Yoshimori, T.2
-
38
-
-
34548259958
-
p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy
-
Pankiv S, et al. p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy. J Biol Chem 2007; 282:24131-45.
-
(2007)
J Biol Chem
, vol.282
, pp. 24131-24145
-
-
Pankiv, S.1
-
39
-
-
33748154216
-
Induction of autophagy in axonal dystrophy and degeneration
-
Wang QJ, et al. Induction of autophagy in axonal dystrophy and degeneration. J Neurosci 2006; 26:8057-68.
-
(2006)
J Neurosci
, vol.26
, pp. 8057-8068
-
-
Wang, Q.J.1
-
40
-
-
34548482499
-
siRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy
-
Chan EY, Kir S and Tooze SA. siRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy. J Biol Chem 2007; 282:25464-74.
-
(2007)
J Biol Chem
, vol.282
, pp. 25464-25474
-
-
Chan, E.Y.1
Kir, S.2
Tooze, S.A.3
-
41
-
-
37649024076
-
Small molecule regulators of autophagy identified by an image-based high-throughput screen
-
Zhang L, et al. Small molecule regulators of autophagy identified by an image-based high-throughput screen. Proc Natl Acad Sci USA 2007; 104:19023-8.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 19023-19028
-
-
Zhang, L.1
-
42
-
-
33845792555
-
CellProfiler: Image analysis software for identifying and quantifying cell phenotypes
-
Carpenter AE, et al. CellProfiler: image analysis software for identifying and quantifying cell phenotypes. Genome Biol 2006; 7:100.
-
(2006)
Genome Biol
, vol.7
, pp. 100
-
-
Carpenter, A.E.1
-
43
-
-
46849121421
-
Utilizing flow cytometry to monitor autophagy in living mammalian cells
-
Shvets E, Fass E and Elazar Z. Utilizing flow cytometry to monitor autophagy in living mammalian cells. Autophagy 2008; 4.
-
(2008)
Autophagy
, pp. 4
-
-
Shvets, E.1
Fass, E.2
Elazar, Z.3
-
44
-
-
0022447864
-
Use of a hydrolysable probe, [14C]lactose, to distinguish between pre-lysosomal and lysosomal steps in the autophagic pathway
-
Hoyvik H, Gordon PB and Seglen PO. Use of a hydrolysable probe, [14C]lactose, to distinguish between pre-lysosomal and lysosomal steps in the autophagic pathway. Exp Cell Res 1986; 166:1-14.
-
(1986)
Exp Cell Res
, vol.166
, pp. 1-14
-
-
Hoyvik, H.1
Gordon, P.B.2
Seglen, P.O.3
-
45
-
-
0014939582
-
Inhibition by insulin of valine turnover in liver. Evidence for a general control of proteolysis
-
Mortimore GE and Mondon CE- Inhibition by insulin of valine turnover in liver. Evidence for a general control of proteolysis. J Biol Chem 1970; 245:2375-83.
-
(1970)
J Biol Chem
, vol.245
, pp. 2375-2383
-
-
Mortimore, G.E.1
Mondon, C.E.2
-
46
-
-
0018763480
-
Inhibition of the lysosomal pathway of protein degradation in isolated rat hepatocytes by ammonia, methylamine, chloroquine and leupeptin
-
Seglen PO, Grinde B and Solheim AE. Inhibition of the lysosomal pathway of protein degradation in isolated rat hepatocytes by ammonia, methylamine, chloroquine and leupeptin, Eur J Biochem 1979; 95:215-25.
-
(1979)
Eur J Biochem
, vol.95
, pp. 215-225
-
-
Seglen, P.O.1
Grinde, B.2
Solheim, A.E.3
-
47
-
-
33847340082
-
The level of synthesis and secretion of Gaussia princeps luciferase in transfected CHO cells is heavily dependent on the choice of signal peptide
-
Knappskog S, et al. The level of synthesis and secretion of Gaussia princeps luciferase in transfected CHO cells is heavily dependent on the choice of signal peptide. J Biotechnol 2007; 128:705-15.
-
(2007)
J Biotechnol
, vol.128
, pp. 705-715
-
-
Knappskog, S.1
-
48
-
-
14044250981
-
Codon-optimized Gaussia luciferase cDNA for mammalian gene expression in culture and in vivo
-
Tannous BA, Kim DE, Fernandez JL, Weissleder R and Breakefield XO. Codon-optimized Gaussia luciferase cDNA for mammalian gene expression in culture and in vivo. Mol Ther 2005; 11:435-43.
-
(2005)
Mol Ther
, vol.11
, pp. 435-443
-
-
Tannous, B.A.1
Kim, D.E.2
Fernandez, J.L.3
Weissleder, R.4
Breakefield, X.O.5
-
50
-
-
33947607164
-
Proteome-wide Identification of HtrA2/Omi Substrates
-
Vande Walle L, et al. Proteome-wide Identification of HtrA2/Omi Substrates. J Proteome Res 2007; 6:1006-15.
-
(2007)
J Proteome Res
, vol.6
, pp. 1006-1015
-
-
Vande Walle, L.1
-
51
-
-
33749162486
-
Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis
-
Yousefi S, et al. Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis. Nat Cell Biol 2006; 8:1124-32.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 1124-1132
-
-
Yousefi, S.1
-
52
-
-
39349083349
-
A highly sensitive assay for monitoring the secretory pathway and ER stress
-
Badr CE, Hewett JW, Breakefield XO and Tannous BA. A highly sensitive assay for monitoring the secretory pathway and ER stress. PLoS ONE 2007; 2:571.
-
(2007)
PLoS ONE
, vol.2
, pp. 571
-
-
Badr, C.E.1
Hewett, J.W.2
Breakefield, X.O.3
Tannous, B.A.4
-
53
-
-
44649141966
-
Regulation of autophagy by cytoplasmic p53
-
Tasdemir E, et al. Regulation of autophagy by cytoplasmic p53. Nat Cell Biol 2008.
-
(2008)
Nat Cell Biol
-
-
Tasdemir, E.1
-
54
-
-
9144224360
-
Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes
-
Tanida I, Ueno T and Kominami E. Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes. J Biol Chem 2004; 279:47704-10.
-
(2004)
J Biol Chem
, vol.279
, pp. 47704-47710
-
-
Tanida, I.1
Ueno, T.2
Kominami, E.3
-
55
-
-
3242888703
-
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation
-
Kabeya Y, et al. LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation. J Cell Sci 2004; 117:2805-12.
-
(2004)
J Cell Sci
, vol.117
, pp. 2805-2812
-
-
Kabeya, Y.1
-
56
-
-
0037423403
-
Human autophagins, a family of cysteine proteinases potentially implicated in cell degradation by autophagy
-
Marino G, et al. Human autophagins, a family of cysteine proteinases potentially implicated in cell degradation by autophagy. J Biol Chem 2003; 278:3671-8.
-
(2003)
J Biol Chem
, vol.278
, pp. 3671-3678
-
-
Marino, G.1
-
57
-
-
33745815311
-
Effects of RNA interference of Atg4B on the limited proteolysis of LC3 in PC12 cells and expression of Atg4B in various rat tissues
-
Yoshimura K, et al. Effects of RNA interference of Atg4B on the limited proteolysis of LC3 in PC12 cells and expression of Atg4B in various rat tissues. Autophagy 2006; 2:200-8.
-
(2006)
Autophagy
, vol.2
, pp. 200-208
-
-
Yoshimura, K.1
-
58
-
-
36448968532
-
FoxO3 coordinately activates protein degradation by the autophagic/lysosomal and proteasomal pathways in atrophying muscle cells
-
Zhao J, et al. FoxO3 coordinately activates protein degradation by the autophagic/lysosomal and proteasomal pathways in atrophying muscle cells. Cell Metab 2007; 6:472-83.
-
(2007)
Cell Metab
, vol.6
, pp. 472-483
-
-
Zhao, J.1
-
59
-
-
36448940798
-
FoxO3 controls autophagy in skeletal muscle in vivo
-
Mammucari C, et al. FoxO3 controls autophagy in skeletal muscle in vivo. Cell Metab 2007; 6:458-71.
-
(2007)
Cell Metab
, vol.6
, pp. 458-471
-
-
Mammucari, C.1
-
60
-
-
34548289502
-
Dynamic FoxO transcription factors
-
Huang H and Tindall DJ. Dynamic FoxO transcription factors. J Cell Sci 2007; 120:2479-87.
-
(2007)
J Cell Sci
, vol.120
, pp. 2479-2487
-
-
Huang, H.1
Tindall, D.J.2
-
61
-
-
30344474574
-
-
Rose TL, Bonneau L, Der C, Marty-Mazars D and Marty F. Starvation-induced expression of autophagy-related genes in Arabidopsis. Biol Cell 2006; 98:53-67.
-
Rose TL, Bonneau L, Der C, Marty-Mazars D and Marty F. Starvation-induced expression of autophagy-related genes in Arabidopsis. Biol Cell 2006; 98:53-67.
-
-
-
-
62
-
-
14744268915
-
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy
-
Yoshimoto K, et al. Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy. Plant Cell 2004; 16:2967-83.
-
(2004)
Plant Cell
, vol.16
, pp. 2967-2983
-
-
Yoshimoto, K.1
-
63
-
-
35048862871
-
An interrelationship between autophagy and filamentous growth in budding yeast
-
Ma J, et al. An interrelationship between autophagy and filamentous growth in budding yeast. Genetics 2007; 177:205-14.
-
(2007)
Genetics
, vol.177
, pp. 205-214
-
-
Ma, J.1
-
64
-
-
34247186472
-
Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4
-
Scherz-Shouval R, et al. Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4. Embo J 2007; 26:1749-60.
-
(2007)
Embo J
, vol.26
, pp. 1749-1760
-
-
Scherz-Shouval, R.1
-
65
-
-
34250825929
-
Oxidation as a post-translational modification that regulates autophagy
-
Scherz-Shouval R, Shvets E and Elazar Z. Oxidation as a post-translational modification that regulates autophagy. Autophagy 2007; 3:371-3.
-
(2007)
Autophagy
, vol.3
, pp. 371-373
-
-
Scherz-Shouval, R.1
Shvets, E.2
Elazar, Z.3
-
66
-
-
33846610475
-
Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry
-
Dai J, et al. Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry. J Proteome Res 2007; 6:250-62.
-
(2007)
J Proteome Res
, vol.6
, pp. 250-262
-
-
Dai, J.1
-
67
-
-
33750456519
-
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
-
Olsen JV, et al. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 2006; 127:635-48.
-
(2006)
Cell
, vol.127
, pp. 635-648
-
-
Olsen, J.V.1
-
69
-
-
44149105911
-
PHOSIDA (phosphorylation site database): Management, structural and evolutionary investigation, and prediction of phosphosites
-
Gnad F, et al. PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites. Genome Biol 2007; 8:250.
-
(2007)
Genome Biol
, vol.8
, pp. 250
-
-
Gnad, F.1
-
70
-
-
0345856413
-
Insulin-dependent signaling regulates azurophil granule-selective macroautophagy in human myeloblastic cells
-
Saeki K, et al. Insulin-dependent signaling regulates azurophil granule-selective macroautophagy in human myeloblastic cells. J Leukoc Biol 2003; 74:1108-16.
-
(2003)
J Leukoc Biol
, vol.74
, pp. 1108-1116
-
-
Saeki, K.1
-
71
-
-
48249125798
-
Loss of Pten, a tumor suppressor, causes the strong inhibition of autophagy without affecting LC3 lipidation
-
Ueno T, et al. Loss of Pten, a tumor suppressor, causes the strong inhibition of autophagy without affecting LC3 lipidation. Autophagy 2008; 4.
-
(2008)
Autophagy
, pp. 4
-
-
Ueno, T.1
-
72
-
-
42949176742
-
Survival of cancer cells is maintained by EGFR independent of its kinase activity
-
Weihua Z, et al. Survival of cancer cells is maintained by EGFR independent of its kinase activity. Cancer Cell 2008; 13:385-93.
-
(2008)
Cancer Cell
, vol.13
, pp. 385-393
-
-
Weihua, Z.1
-
73
-
-
33644540193
-
Autophagy-mediated clearance of huntingrin aggregates triggered by the insulin-signaling pathway
-
Yamamoto A, Cremona ML and Rothman JE. Autophagy-mediated clearance of huntingrin aggregates triggered by the insulin-signaling pathway. J Cell Biol 2006; 172:719-31.
-
(2006)
J Cell Biol
, vol.172
, pp. 719-731
-
-
Yamamoto, A.1
Cremona, M.L.2
Rothman, J.E.3
-
74
-
-
28844502647
-
Structural basis for the specificity and catalysis of human Atg4B responsible for mammalian autophagy
-
Sugawara K, et al. Structural basis for the specificity and catalysis of human Atg4B responsible for mammalian autophagy. J Biol Chem 2005; 280:40058-65.
-
(2005)
J Biol Chem
, vol.280
, pp. 40058-40065
-
-
Sugawara, K.1
-
75
-
-
29144517659
-
The crystal structure of human Atg4b, a processing and de-conjugating enzyme for autophagosome-forming modifiers
-
Kumanomidou T, et al. The crystal structure of human Atg4b, a processing and de-conjugating enzyme for autophagosome-forming modifiers. J Mol Biol 2006; 355:612-8.
-
(2006)
J Mol Biol
, vol.355
, pp. 612-618
-
-
Kumanomidou, T.1
-
76
-
-
41449085132
-
A Method to Measure Cardiac Autophagic Flux in vivo
-
Iwai-Kanai E, et al. A Method to Measure Cardiac Autophagic Flux in vivo. Autophagy 2008; 4.
-
(2008)
Autophagy
, pp. 4
-
-
Iwai-Kanai, E.1
-
77
-
-
34548155475
-
Fusion of Gaussia luciferase to an engineered anti-carcinoembryonic antigen (CEA) antibody for in vivo optical imaging
-
Venisnik KM, Olafsen T, Gambhir SS and Wu AM. Fusion of Gaussia luciferase to an engineered anti-carcinoembryonic antigen (CEA) antibody for in vivo optical imaging. Mol Imaging Biol 2007; 9:267-77.
-
(2007)
Mol Imaging Biol
, vol.9
, pp. 267-277
-
-
Venisnik, K.M.1
Olafsen, T.2
Gambhir, S.S.3
Wu, A.M.4
-
78
-
-
38749112547
-
A secreted luciferase for ex vivo monitoring of in vivo processes
-
Wurdinger T, et al. A secreted luciferase for ex vivo monitoring of in vivo processes. Nat Methods 2008; 5:171-3.
-
(2008)
Nat Methods
, vol.5
, pp. 171-173
-
-
Wurdinger, T.1
|