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Volumn 24, Issue 10, 2008, Pages 2297-2305

Community of extremely halophilic bacteria in historic Dagong Brine Well in southwestern China

Author keywords

16S rRNA; 16S 23S rRNA ISR; Dagong Brine Well; Extremely halophilic bacteria; Microbial diversity

Indexed keywords

ACIDS; BIODIVERSITY; CANNING; FATTY ACIDS; METROPOLITAN AREA NETWORKS; NUCLEIC ACIDS; RNA;

EID: 50249083330     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-008-9744-0     Document Type: Article
Times cited : (35)

References (36)
  • 1
    • 0036008796 scopus 로고    scopus 로고
    • Long PCR amplified rDNA for PCR-RFLP and Rep-PCR-based approaches to recognize closely related microbial species
    • D Abd-El-Haleem AC Layton GS Sayler 2002 Long PCR amplified rDNA for PCR-RFLP and Rep-PCR-based approaches to recognize closely related microbial species J Microbiol Methods 49 315 319
    • (2002) J Microbiol Methods , vol.49 , pp. 315-319
    • Abd-El-Haleem, D.1    Layton, A.C.2    Sayler, G.S.3
  • 2
    • 31944444210 scopus 로고    scopus 로고
    • Identification and characterization of salt-inducible polypeptide in Paenibacillus spp., a moderately halophilic bacterium
    • S Ashrafaddin K Aliasghar J Rastgar 2005 Identification and characterization of salt-inducible polypeptide in Paenibacillus spp., a moderately halophilic bacterium J Biosci Bioeng 100 573 575
    • (2005) J Biosci Bioeng , vol.100 , pp. 573-575
    • Ashrafaddin, S.1    Aliasghar, K.2    Rastgar, J.3
  • 4
    • 0036965056 scopus 로고    scopus 로고
    • 16S-23S rDNA intergenic spacer region polymorphism of Lactococcus garvieae, Lactococcus raffinolactis and Lactococcus lactis as revealed by PCR and nucleotide sequence analysis
    • G Blaiotta O Pepe G Mauriello 2002 16S-23S rDNA intergenic spacer region polymorphism of Lactococcus garvieae, Lactococcus raffinolactis and Lactococcus lactis as revealed by PCR and nucleotide sequence analysis Syst Appl Microbiol 25 520 527
    • (2002) Syst Appl Microbiol , vol.25 , pp. 520-527
    • Blaiotta, G.1    Pepe, O.2    Mauriello, G.3
  • 5
    • 0034993578 scopus 로고    scopus 로고
    • Is the 16S-23S internal transcribed spacer regions a good tool for use in molecular systematics and population genetics? a case study in Cyanobacteri
    • SL Boyer R Valerie Flechtner 2001 Is the 16S-23S internal transcribed spacer regions a good tool for use in molecular systematics and population genetics? A case study in Cyanobacteri Mol Biol Evol 18 1057 1069
    • (2001) Mol Biol Evol , vol.18 , pp. 1057-1069
    • Boyer, S.L.1    Valerie, R.2    Flechtner3
  • 6
    • 26844576192 scopus 로고    scopus 로고
    • Identification of bacteria potentially responsible for oxic and anoxic sulfide oxidation in biofilters of a recirculating mariculture system
    • E Cytryn JV Rijn A Schramm 2005 Identification of bacteria potentially responsible for oxic and anoxic sulfide oxidation in biofilters of a recirculating mariculture system Appl Environ Microbiol 71 6134 6141
    • (2005) Appl Environ Microbiol , vol.71 , pp. 6134-6141
    • Cytryn, E.1    Rijn, J.V.2    Schramm, A.3
  • 7
    • 24344510265 scopus 로고    scopus 로고
    • Discordant 16S and 23S rRNA gene phylogenies for the genus Helicobacter: Implications for phylogenetic inference and systematics
    • FE Dewhirst Z Shen MS Scimeca 2005 Discordant 16S and 23S rRNA gene phylogenies for the genus Helicobacter: implications for phylogenetic inference and systematics J Bacteriol 187 6106 6118
    • (2005) J Bacteriol , vol.187 , pp. 6106-6118
    • Dewhirst, F.E.1    Shen, Z.2    Scimeca, M.S.3
  • 8
    • 11844305671 scopus 로고    scopus 로고
    • Characterization of extremely halophilic Archaea isolated from the Ayvalik saltern, Turkey
    • R Elevi P Assa M Birbir 2004 Characterization of extremely halophilic Archaea isolated from the Ayvalik saltern, Turkey World J Microbiol Biotechnol 20 719 725
    • (2004) World J Microbiol Biotechnol , vol.20 , pp. 719-725
    • Elevi, R.1    Assa, P.2    Birbir, M.3
  • 9
    • 0022617055 scopus 로고
    • The ecology and taxonomy of aerobic chemoorganotrophic halophilic eubacteria
    • RV Francisco 1986 The ecology and taxonomy of aerobic chemoorganotrophic halophilic eubacteria FEMS Microbiol Lett 39 17 22
    • (1986) FEMS Microbiol Lett , vol.39 , pp. 17-22
    • Francisco, R.V.1
  • 10
    • 0033135694 scopus 로고    scopus 로고
    • Use of the 16S-23S ribosomal genes spacer region in studies of prokaryotic diversity
    • J Garcya-Martynez SG Acinas AI Anton 1999 Use of the 16S-23S ribosomal genes spacer region in studies of prokaryotic diversity J Microbiol Methods 36 55 64
    • (1999) J Microbiol Methods , vol.36 , pp. 55-64
    • Garcya-Martynez, J.1    Acinas, S.G.2    Anton, A.I.3
  • 12
    • 33847253016 scopus 로고    scopus 로고
    • Diversity of salt-tolerant culturable aerobic microorganisms on historic buildings in Southern Brazil
    • K Greicy C Christine Gaylarde 2007 Diversity of salt-tolerant culturable aerobic microorganisms on historic buildings in Southern Brazil Word J Microbiol Biotechnol 23 363 366
    • (2007) Word J Microbiol Biotechnol , vol.23 , pp. 363-366
    • Greicy, K.1    Christine, C.2    Gaylarde3
  • 13
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition
    • RI Griffiths AS Whiteley AGO Donnell 2000 Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition Appl Environ Microbiol 66 5488 5491
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.S.2    Donnell, A.G.O.3
  • 14
    • 0034292457 scopus 로고    scopus 로고
    • Comparative analyses of the bacterial diversity on two different biodeteriorated wall paintings by DGGE and 16S rDNA sequence analysis
    • C Gürtner J Heyrman W Lubitz 2000 Comparative analyses of the bacterial diversity on two different biodeteriorated wall paintings by DGGE and 16S rDNA sequence analysis Int Biodeterior Biodegradation 46 229 239
    • (2000) Int Biodeterior Biodegradation , vol.46 , pp. 229-239
    • Gürtner, C.1    Heyrman, J.2    Lubitz, W.3
  • 15
    • 0035150977 scopus 로고    scopus 로고
    • Genomic approaches to typing taxonomy and evolution of bacterial isolates
    • V Gürtler BC Mayall 2001 Genomic approaches to typing taxonomy and evolution of bacterial isolates Int J Syst Evol Microbiol 51 3 16
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 3-16
    • Gürtler, V.1    Mayall, B.C.2
  • 16
    • 0030054296 scopus 로고    scopus 로고
    • New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region
    • V Gürtler A Stanisich 1996 New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region Microbiol 142 3 16
    • (1996) Microbiol , vol.142 , pp. 3-16
    • Gürtler, V.1    Stanisich, A.2
  • 17
    • 0027461618 scopus 로고
    • Rapid identification of bacteria on the basis of polymerase chain reaction amplified ribosomal DNA spacer polymorphisms
    • MA Jensen JA Webster N Straus 1993 Rapid identification of bacteria on the basis of polymerase chain reaction amplified ribosomal DNA spacer polymorphisms Appl Environ Microbiol 59 945 952
    • (1993) Appl Environ Microbiol , vol.59 , pp. 945-952
    • Jensen, M.A.1    Webster, J.A.2    Straus, N.3
  • 18
    • 1842422527 scopus 로고    scopus 로고
    • Halomonas neptunia sp. nov., Halomonas sulfidaeris sp. nov., Halomonas axialensis sp. nov. and Halomonas hydrothermalis sp. nov.: Halophilic bacteria isolated from deep-sea hydrothermal-vent environments
    • JZ Kaye M Carmen Marquez A Ventosa 2004 Halomonas neptunia sp. nov., Halomonas sulfidaeris sp. nov., Halomonas axialensis sp. nov. and Halomonas hydrothermalis sp. nov.: halophilic bacteria isolated from deep-sea hydrothermal-vent environments Int J Syst Evol Microbiol 54 499 511
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 499-511
    • Kaye, J.Z.1    Carmen Marquez, M.2    Ventosa, A.3
  • 19
    • 50249099334 scopus 로고    scopus 로고
    • Salt drilling in ancient China and other Stories
    • Kuhn O (2004) Salt drilling in ancient China and other Stories. J Can Soc Explor Geophys 6:39-43. http://www.cseg.ca/recorder
    • (2004) J Can Soc Explor Geophys , vol.6 , pp. 39-43
    • Kuhn, O.1
  • 20
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • SK Kumar I Tamura M Nei 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment Brief Bioinform 5 150 163
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.K.1    Tamura, I.2    Nei, M.3
  • 21
    • 0032143012 scopus 로고    scopus 로고
    • Utility of 16S-23S rDNA spacer region methodology: How similar are interspace regions within a genome and between strains for closely related organisms
    • ML Nagpal KF Fox A Fox 1998 Utility of 16S-23S rDNA spacer region methodology: how similar are interspace regions within a genome and between strains for closely related organisms J Microbiol Methods 33 211 219
    • (1998) J Microbiol Methods , vol.33 , pp. 211-219
    • Nagpal, M.L.1    Fox, K.F.2    Fox, A.3
  • 22
    • 34848832058 scopus 로고    scopus 로고
    • Analysing diversity among Indian isolates of Anabaena (Nostocales, Cyanophyta) using morphological, physiological and biochemical characters
    • S Nayak R Prasanna BM Prasanna 2007 Analysing diversity among Indian isolates of Anabaena (Nostocales, Cyanophyta) using morphological, physiological and biochemical characters World J Microbiol Biotechnol 23 1575 1584
    • (2007) World J Microbiol Biotechnol , vol.23 , pp. 1575-1584
    • Nayak, S.1    Prasanna, R.2    Prasanna, B.M.3
  • 23
    • 0033009392 scopus 로고    scopus 로고
    • A procedure for the enrichment and isolation of Halobacterium
    • A Oren CD Litchfield 1999 A procedure for the enrichment and isolation of Halobacterium FEMS Microbiol Lett 173 353 358
    • (1999) FEMS Microbiol Lett , vol.173 , pp. 353-358
    • Oren, A.1    Litchfield, C.D.2
  • 24
    • 0029896747 scopus 로고    scopus 로고
    • The polar lipid composition of Walsby's square bacterium
    • A Oren S Duker S Ritter 1996 The polar lipid composition of Walsby's square bacterium FEMS Microbiol Lett 138 135 140
    • (1996) FEMS Microbiol Lett , vol.138 , pp. 135-140
    • Oren, A.1    Duker, S.2    Ritter, S.3
  • 25
    • 0031012499 scopus 로고    scopus 로고
    • Proposed minimal standards for description of new taxa in the order Halobacteriales
    • A Oren A Ventosa WD Grant 1997 Proposed minimal standards for description of new taxa in the order Halobacteriales Int J Syst Bacteriol 47 233 238
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 233-238
    • Oren, A.1    Ventosa, A.2    Grant, W.D.3
  • 26
    • 23944462637 scopus 로고    scopus 로고
    • How to be moderately halophilic with broad salt tolerance: Clues from genome of Chromohalobacter salexigens
    • A Oren F Larimer P Richardson 2005 How to be moderately halophilic with broad salt tolerance: clues from genome of Chromohalobacter salexigens Extremophiles 9 275 279
    • (2005) Extremophiles , vol.9 , pp. 275-279
    • Oren, A.1    Larimer, F.2    Richardson, P.3
  • 27
    • 33751349287 scopus 로고    scopus 로고
    • Molecular characterization of Halobacillus strains isolated from different medieval wall paintings and building materials in Austria
    • K Ripka EBM Denner A Michaelsen 2006 Molecular characterization of Halobacillus strains isolated from different medieval wall paintings and building materials in Austria Int Biodeterior Biodegrad 58 124 132
    • (2006) Int Biodeterior Biodegrad , vol.58 , pp. 124-132
    • Ripka, K.1    Denner, E.B.M.2    Michaelsen, A.3
  • 28
    • 0034519272 scopus 로고    scopus 로고
    • Identification of acetic acid bacteria by RFLP of PCR-amplified 16S rDNA and 16S-23S rDNA intergenic spacer
    • A Ruiz A Poblet JM Mas Guillamon 2000 Identification of acetic acid bacteria by RFLP of PCR-amplified 16S rDNA and 16S-23S rDNA intergenic spacer Int J Syst Evol Microbiol 50 1981 1987
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1981-1987
    • Ruiz, A.1    Poblet, A.2    Mas, J.M.3    Guillamon4
  • 29
    • 0346494968 scopus 로고    scopus 로고
    • Effect of dilution rate on structure of a mesophilic acetate-degrading methanogenic community during continuous cultivation
    • T Shigematsu YQ Tang H Kawaguchi 2003 Effect of dilution rate on structure of a mesophilic acetate-degrading methanogenic community during continuous cultivation J Biosci Bioeng 96 547 558
    • (2003) J Biosci Bioeng , vol.96 , pp. 547-558
    • Shigematsu, T.1    Tang, Y.Q.2    Kawaguchi, H.3
  • 30
    • 0036209884 scopus 로고    scopus 로고
    • Fungal colonization and succession on newly painted buildings and the effect of biocide
    • MA Shirakawa CC Gaylarde PM Gaylarde 2002 Fungal colonization and succession on newly painted buildings and the effect of biocide FEMS Microbiol Ecol 39 165 173
    • (2002) FEMS Microbiol Ecol , vol.39 , pp. 165-173
    • Shirakawa, M.A.1    Gaylarde, C.C.2    Gaylarde, P.M.3
  • 31
    • 34848818493 scopus 로고    scopus 로고
    • Isolation and characterization of novel Serratia marcescens (AY927692) for pentachlorophenol degradation from pulp and paper mill waste
    • S Singh R Chandra DK Patel 2007 Isolation and characterization of novel Serratia marcescens (AY927692) for pentachlorophenol degradation from pulp and paper mill waste Word J Microbiol Biotechnol 23 1747 1754
    • (2007) Word J Microbiol Biotechnol , vol.23 , pp. 1747-1754
    • Singh, S.1    Chandra, R.2    Patel, D.K.3
  • 33
    • 0036963507 scopus 로고    scopus 로고
    • Use of 16S-23S rRNA Spacer-Region (SR)-PCR for identification of intestinal Clostridia
    • Y Song C Liu D Molitoris 2002 Use of 16S-23S rRNA Spacer-Region (SR)-PCR for identification of intestinal Clostridia Syst Appl Microbiol 25 528 535
    • (2002) Syst Appl Microbiol , vol.25 , pp. 528-535
    • Song, Y.1    Liu, C.2    Molitoris, D.3
  • 34
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • JD Thompson TJ Gibson F Plewniak 1997 The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 24 4876 4882
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3
  • 35
  • 36
    • 0024340408 scopus 로고
    • Application of gas-liquid chromatography to the routine identification of nonfermenting Gram-negative bacteria in clinical specimens
    • A Veys W Callewaert E Waelkens 1989 Application of gas-liquid chromatography to the routine identification of nonfermenting Gram-negative bacteria in clinical specimens J Clin Microbiol 27 1538 1542
    • (1989) J Clin Microbiol , vol.27 , pp. 1538-1542
    • Veys, A.1    Callewaert, W.2    Waelkens, E.3


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