메뉴 건너뛰기




Volumn 142, Issue 1, 1996, Pages 3-16

New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region

Author keywords

Identification; rDNA; rrn operon; Spacer region; Typing

Indexed keywords

BACTERIAL DNA; PRIMER DNA; RIBOSOME DNA; RNA 16S; RNA 23S; SPACER DNA;

EID: 0030054296     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/13500872-142-1-3     Document Type: Review
Times cited : (852)

References (98)
  • 1
    • 0029121646 scopus 로고
    • Demonstration of Mycobacterium kansasii species heterogeneity by the amplification of the 16S-23S spacer region
    • Abed, Y., Bollet, C. & De Micco, P. (1995a). Demonstration of Mycobacterium kansasii species heterogeneity by the amplification of the 16S-23S spacer region. J Med Microbiol 43, 156-158.
    • (1995) J Med Microbiol , vol.43 , pp. 156-158
    • Abed, Y.1    Bollet, C.2    De Micco, P.3
  • 2
    • 0028902671 scopus 로고
    • Efficient discrimination of Mycobacterium tuberculosis strains by 16S-23S spacer region-based random amplified polymorphic DNA analysis
    • Abed, Y., Davin-Regli, A., Bollet, C. & De Micco, P. (1995b). Efficient discrimination of Mycobacterium tuberculosis strains by 16S-23S spacer region-based random amplified polymorphic DNA analysis. J Clin Microbiol 33, 1418-1420.
    • (1995) J Clin Microbiol , vol.33 , pp. 1418-1420
    • Abed, Y.1    Davin-Regli, A.2    Bollet, C.3    De Micco, P.4
  • 3
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., Ludwig, W. & Schleifer, K.-H. (1995). Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59, 143-169.
    • (1995) Microbiol Rev , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 4
    • 0021234947 scopus 로고
    • Mycoplasmas (Mollicutes) have a low number of rRNA genes
    • Amikam, D., Glaser, G. & Razin, S. (1984). Mycoplasmas (Mollicutes) have a low number of rRNA genes. J Bacteriol 158, 376-378.
    • (1984) J Bacteriol , vol.158 , pp. 376-378
    • Amikam, D.1    Glaser, G.2    Razin, S.3
  • 5
    • 0028114696 scopus 로고
    • The sequence of the single 16S rRNA gene of the thermophilic eubacterium Rhodothermus marinus reveals a distant relationship to the group containing Flexibacter, Bacteroides, and Cytophaga species
    • Andrésson, O. S. & Fridjónsson, O. H. (1994). The sequence of the single 16S rRNA gene of the thermophilic eubacterium Rhodothermus marinus reveals a distant relationship to the group containing Flexibacter, Bacteroides, and Cytophaga species. J Bacteriol 176, 6165-6169.
    • (1994) J Bacteriol , vol.176 , pp. 6165-6169
    • Andrésson, O.S.1    Fridjónsson, O.H.2
  • 6
    • 0028909599 scopus 로고
    • Characterization of serogroup A Neisseria meningitidis strains by rRNA gene restriction patterns and PCR: Correlation with the results of serotyping, subtyping and multilocus enzyme electrophoresis
    • Auriol, J., Guesdon, J. L., Guibourdenche, M. & Riou, J. Y. (1995). Characterization of serogroup A Neisseria meningitidis strains by rRNA gene restriction patterns and PCR: correlation with the results of serotyping, subtyping and multilocus enzyme electrophoresis. FEMS Immunol Med Microbiol 10, 219-226.
    • (1995) FEMS Immunol Med Microbiol , vol.10 , pp. 219-226
    • Auriol, J.1    Guesdon, J.L.2    Guibourdenche, M.3    Riou, J.Y.4
  • 7
    • 0025771247 scopus 로고
    • Novel tRNA gene organization in the 16S-23S intergenic spacer of the Streptococcus pneumoniae rRNA gene cluster
    • Bacot, C. M. & Reeves, R. H. (1991). Novel tRNA gene organization in the 16S-23S intergenic spacer of the Streptococcus pneumoniae rRNA gene cluster. J Bacteriol 173, 4234-4236.
    • (1991) J Bacteriol , vol.173 , pp. 4234-4236
    • Bacot, C.M.1    Reeves, R.H.2
  • 8
    • 0026207421 scopus 로고
    • The 16s/23s ribosomal spacer region as a target for DNA probes to identify eubacteria
    • Barry, T., Colleran, G., Glennon, M., Dunican, L. K. & Gannon, F. (1991). The 16s/23s ribosomal spacer region as a target for DNA probes to identify eubacteria. PCR Methods Appl 1, 51-56.
    • (1991) PCR Methods Appl , vol.1 , pp. 51-56
    • Barry, T.1    Colleran, G.2    Glennon, M.3    Dunican, L.K.4    Gannon, F.5
  • 9
    • 0022531262 scopus 로고
    • Mycobacteria possess a surprisingly small number of ribosomal RNA genes in relation to the size of their genome
    • Bercovier, H., Kafri, O. & Sela, S. (1986). Mycobacteria possess a surprisingly small number of ribosomal RNA genes in relation to the size of their genome. Biochem Biophys Res Commun 136, 1136-1141.
    • (1986) Biochem Biophys Res Commun , vol.136 , pp. 1136-1141
    • Bercovier, H.1    Kafri, O.2    Sela, S.3
  • 10
    • 0028915478 scopus 로고
    • Comparative analyisis of the 16S ro 23S intergenic spacer sequences of Bacillus thuringiensis strains and subspecies and of closely related species
    • Bourque, S. N., Valero, J. R., Lavoie, M. C. & Levesque, R. C. (1995). Comparative analyisis of the 16S ro 23S intergenic spacer sequences of Bacillus thuringiensis strains and subspecies and of closely related species. Appl Environ Microbiol 61, 1623-1626.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1623-1626
    • Bourque, S.N.1    Valero, J.R.2    Lavoie, M.C.3    Levesque, R.C.4
  • 11
    • 0004962792 scopus 로고
    • Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli
    • Brosius, J., Dull, T. J. & Noller, H. F. (1980). Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci USA 77, 201-204.
    • (1980) Proc Natl Acad Sci USA , vol.77 , pp. 201-204
    • Brosius, J.1    Dull, T.J.2    Noller, H.F.3
  • 12
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • Brosius, J., Dull, T. J., Sleeter, D. D. & Noller, H. F. (1981). Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148, 107-127.
    • (1981) J Mol Biol , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 13
    • 0027233457 scopus 로고
    • Studies on the large subunit ribosomal RNA genes and intergenic spacer regions of non-proteolytic Clostridium botulinum types B, E and F
    • Campbell, K. D., East, A. K., Thompson, D. E. & Collins, M. D. (1993). Studies on the large subunit ribosomal RNA genes and intergenic spacer regions of non-proteolytic Clostridium botulinum types B, E and F. Res Microbiol 144, 171-180.
    • (1993) Res Microbiol , vol.144 , pp. 171-180
    • Campbell, K.D.1    East, A.K.2    Thompson, D.E.3    Collins, M.D.4
  • 14
    • 0028924766 scopus 로고
    • PCR amplification of rRNA intergenic spacer regions as a method for epidemiologic typing of Clostridium difficile
    • Cartwright, C. P., Stock, F., Beekman, S. E., Williams, E. C. & Gill, V. J. (1995). PCR amplification of rRNA intergenic spacer regions as a method for epidemiologic typing of Clostridium difficile. J Clin Microbiol 33, 184-187.
    • (1995) J Clin Microbiol , vol.33 , pp. 184-187
    • Cartwright, C.P.1    Stock, F.2    Beekman, S.E.3    Williams, E.C.4    Gill, V.J.5
  • 15
    • 0028106338 scopus 로고
    • Characterization of PCR-ribotyping for Burkholderia (Pseudomonas) cepacia
    • Dasen, S. E., LiPuma, J. J., Kostman, J. R. & Stull, T. L. (1994). Characterization of PCR-ribotyping for Burkholderia (Pseudomonas) cepacia. J Clin Microbiol 32, 2422-2424.
    • (1994) J Clin Microbiol , vol.32 , pp. 2422-2424
    • Dasen, S.E.1    LiPuma, J.J.2    Kostman, J.R.3    Stull, T.L.4
  • 16
    • 0028357969 scopus 로고
    • Typing of Staphylococcus aureus by amplification of the 16S-23S rRNA intergenic spacer sequences
    • Dolzani, L., Tonin, E., Lagatolla, C. & Monti-Bragadin, C. (1994). Typing of Staphylococcus aureus by amplification of the 16S-23S rRNA intergenic spacer sequences. FEMS Microbiol Lett 119, 167-174.
    • (1994) FEMS Microbiol Lett , vol.119 , pp. 167-174
    • Dolzani, L.1    Tonin, E.2    Lagatolla, C.3    Monti-Bragadin, C.4
  • 17
    • 0028956886 scopus 로고
    • Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannu complex by restriction analysis of the 16S-23S rRNA intergenic spacer sequences
    • Dolzani, L., Tonin, E., Lagatolla, C., Prandin, L. & Monti-Bragadin, C. (1995). Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannu complex by restriction analysis of the 16S-23S rRNA intergenic spacer sequences. J Clin Microbiol 33, 1108-1113.
    • (1995) J Clin Microbiol , vol.33 , pp. 1108-1113
    • Dolzani, L.1    Tonin, E.2    Lagatolla, C.3    Prandin, L.4    Monti-Bragadin, C.5
  • 18
    • 0025604834 scopus 로고
    • Localization and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides
    • Dryden, S. C. & Kaplan, S. (1990). Localization and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides. Nucleic Acids Res 18, 7267-7277.
    • (1990) Nucleic Acids Res , vol.18 , pp. 7267-7277
    • Dryden, S.C.1    Kaplan, S.2
  • 19
    • 0027506857 scopus 로고
    • Molecular characterization of DNA encoding 23S rRNA and 16S-23S rRNA intergenic spacer regions of Aeromonas hydrophila
    • East, A. K. & Collins, M. D. (1993). Molecular characterization of DNA encoding 23S rRNA and 16S-23S rRNA intergenic spacer regions of Aeromonas hydrophila. FEMS Microbiol Lett 106, 129-134.
    • (1993) FEMS Microbiol Lett , vol.106 , pp. 129-134
    • East, A.K.1    Collins, M.D.2
  • 20
    • 0026905942 scopus 로고
    • Analysis of DNA encoding 23S rRNA and 16S-23S rRNA intergenic spacer regions from Plesiomonas shigelloides
    • East, A. K., Allaway, D. & Collins, M. D. (1992). Analysis of DNA encoding 23S rRNA and 16S-23S rRNA intergenic spacer regions from Plesiomonas shigelloides. FEMS Microbiol Lett 74, 57-62.
    • (1992) FEMS Microbiol Lett , vol.74 , pp. 57-62
    • East, A.K.1    Allaway, D.2    Collins, M.D.3
  • 21
    • 0027282950 scopus 로고
    • A ribosomal DNA fragment of Listeria monocytogenes and its use as a genus-specific probe in an aqueous-phase hybridization assay
    • Emond, E., Fliss, I. & Pandian, S. (1993). A ribosomal DNA fragment of Listeria monocytogenes and its use as a genus-specific probe in an aqueous-phase hybridization assay. Appl Environ Microbiol 59, 2690-2697.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 2690-2697
    • Emond, E.1    Fliss, I.2    Pandian, S.3
  • 22
    • 0021801360 scopus 로고
    • Organization and nucleotide sequence analysis of an rRNA and tRNA gene cluster from Caulobacter crescentus
    • Feingold, J., Bellofatto, V., Shapiro, L. & Amemiya, K. (1985). Organization and nucleotide sequence analysis of an rRNA and tRNA gene cluster from Caulobacter crescentus. J Bacteriol 163, 155-166.
    • (1985) J Bacteriol , vol.163 , pp. 155-166
    • Feingold, J.1    Bellofatto, V.2    Shapiro, L.3    Amemiya, K.4
  • 23
    • 0029653518 scopus 로고
    • Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
    • Fleischmann, R. D. and others (1995). Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269, 496-512.
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1
  • 24
    • 0027241144 scopus 로고
    • Sequence-based differentiation of strains in the Mycobacterium avium complex
    • Frothingham, R. & Wilson, K. H. (1993). Sequence-based differentiation of strains in the Mycobacterium avium complex. J Bacteriol 175, 2818-2825.
    • (1993) J Bacteriol , vol.175 , pp. 2818-2825
    • Frothingham, R.1    Wilson, K.H.2
  • 25
    • 0027957345 scopus 로고
    • Molecular phylogeny of the Mycobacterium avium complex demonstrates clinically meaningful divisions
    • Frothingham, R. & Wilson, K. H. (1994). Molecular phylogeny of the Mycobacterium avium complex demonstrates clinically meaningful divisions. J Infect Dis 169, 305-312.
    • (1994) J Infect Dis , vol.169 , pp. 305-312
    • Frothingham, R.1    Wilson, K.H.2
  • 26
    • 0026050603 scopus 로고
    • Cloning, mapping, and molecular characterization of the rRNA operons of Clostridium perfringens
    • Garnier, T., Canard, B. & Cole, S. T. (1991). Cloning, mapping, and molecular characterization of the rRNA operons of Clostridium perfringens. J Bacteriol 173, 5431-5438.
    • (1991) J Bacteriol , vol.173 , pp. 5431-5438
    • Garnier, T.1    Canard, B.2    Cole, S.T.3
  • 27
    • 0028339028 scopus 로고
    • Comparison of the 23S ribosomal RNA genes and the spacer region between the 16S and 23S rRNA genes of the closely related Mycobacterium avium and Mycobacterium paratuberculosis and the fast-growing Mycobacterium phlei
    • van der Giessen, J. W. B., Haring, R. M. & van der Zeijst, B. A. M. (1994). Comparison of the 23S ribosomal RNA genes and the spacer region between the 16S and 23S rRNA genes of the closely related Mycobacterium avium and Mycobacterium paratuberculosis and the fast-growing Mycobacterium phlei. Microbiology 140, 1103-1108.
    • (1994) Microbiology , vol.140 , pp. 1103-1108
    • Van Der Giessen, J.W.B.1    Haring, R.M.2    Van Der Zeijst, B.A.M.3
  • 30
    • 0022182564 scopus 로고
    • Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rrnB
    • Green, C. J., Stewart, G. C., Hollis, M. A., Vold, B. S. & Bott, K. F. (1985). Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rrnB. Gene 37, 261-266.
    • (1985) Gene , vol.37 , pp. 261-266
    • Green, C.J.1    Stewart, G.C.2    Hollis, M.A.3    Vold, B.S.4    Bott, K.F.5
  • 31
    • 0026901079 scopus 로고
    • Strain identification of Actinobacillus actinomycetemcomitans using the polymerase chain reaction
    • Griffen, A. L., Leys, E. J. & Fuerst, P. A. (1992). Strain identification of Actinobacillus actinomycetemcomitans using the polymerase chain reaction. Oral Microbiol Immunol 7, 240-243.
    • (1992) Oral Microbiol Immunol , vol.7 , pp. 240-243
    • Griffen, A.L.1    Leys, E.J.2    Fuerst, P.A.3
  • 32
    • 0027787605 scopus 로고
    • Typing of Clostridium difficile strains by PCR-amplification of variable length 16S-23S rDNA spacer regions
    • Gürtler, V. (1993). Typing of Clostridium difficile strains by PCR-amplification of variable length 16S-23S rDNA spacer regions. J Gen Microbiol 139, 3089-3097.
    • (1993) J Gen Microbiol , vol.139 , pp. 3089-3097
    • Gürtler, V.1
  • 33
    • 0029057279 scopus 로고
    • Typing of Staphylococcus aureus strains by PCR-amplification of variable length 16S-23S rDNA spacer regions: Characterization of spacer sequences
    • Gürtler, V. & Barrie, H. D. (1995). Typing of Staphylococcus aureus strains by PCR-amplification of variable length 16S-23S rDNA spacer regions: characterization of spacer sequences. Microbiology 141, 1255-1265.
    • (1995) Microbiology , vol.141 , pp. 1255-1265
    • Gürtler, V.1    Barrie, H.D.2
  • 34
    • 0028013538 scopus 로고
    • Are point mutations or DNA rearrangements responsible for the restriction fragment length polymorphisms that are used to type bacteria?
    • Hall, L. M. C. (1994). Are point mutations or DNA rearrangements responsible for the restriction fragment length polymorphisms that are used to type bacteria? Microbiology 140, 197-204.
    • (1994) Microbiology , vol.140 , pp. 197-204
    • Hall, L.M.C.1
  • 35
    • 0027328636 scopus 로고
    • Detection and tentative identification of dominant mycoplasma species in cell cultures by restriction analysis of the 16S-23S rRNA intergenic spacer regions
    • Harasawa, R., Mizusawa, H., Nozawa, K., Nakagawa, T., Asada, K. & Kato, I. (1993). Detection and tentative identification of dominant mycoplasma species in cell cultures by restriction analysis of the 16S-23S rRNA intergenic spacer regions. Res Microbiol 144, 489-493.
    • (1993) Res Microbiol , vol.144 , pp. 489-493
    • Harasawa, R.1    Mizusawa, H.2    Nozawa, K.3    Nakagawa, T.4    Asada, K.5    Kato, I.6
  • 36
    • 0023972463 scopus 로고
    • Loss of the spacer loop sequence from the rrnB operon in the Escherichia coli K-12 subline that bears the relA1 mutation
    • Harvey, S., Hill, C. W., Squires, C. & Squires, C. L. (1988). Loss of the spacer loop sequence from the rrnB operon in the Escherichia coli K-12 subline that bears the relA1 mutation. J Bacteriol 170, 1235-1238.
    • (1988) J Bacteriol , vol.170 , pp. 1235-1238
    • Harvey, S.1    Hill, C.W.2    Squires, C.3    Squires, C.L.4
  • 37
    • 0029130219 scopus 로고
    • Intergenic 16S rRNA gene (rDNA)-23S rDNA sequence length polymorphisms in members of the family Legionellaceae
    • Hookey, J. V., Birtles, R. J. & Saunders, N. A. (1995). Intergenic 16S rRNA gene (rDNA)-23S rDNA sequence length polymorphisms in members of the family Legionellaceae. J Clin Microbiol 33, 2377-2381.
    • (1995) J Clin Microbiol , vol.33 , pp. 2377-2381
    • Hookey, J.V.1    Birtles, R.J.2    Saunders, N.A.3
  • 38
    • 0021198278 scopus 로고
    • Nucleotide sequence of the rrnB 16S ribosomal RNA gene from Mycoplasma capricolum
    • Iwami, M., Muto, A., Yamao, F. & Osawa, S. (1984). Nucleotide sequence of the rrnB 16S ribosomal RNA gene from Mycoplasma capricolum. Mol & Gen Genet 196, 317-322.
    • (1984) Mol & Gen Genet , vol.196 , pp. 317-322
    • Iwami, M.1    Muto, A.2    Yamao, F.3    Osawa, S.4
  • 40
    • 0021101277 scopus 로고
    • DNA sequence of the 16S rRNA/23S rRNA intercistronic spacer of two rDNA operons of the archaebacterium Methanecoccus vannielii
    • Jarsch, M. & Böck, A. (1983). DNA sequence of the 16S rRNA/23S rRNA intercistronic spacer of two rDNA operons of the archaebacterium Methanecoccus vannielii. Nucleic Acids Res 11, 7537-7544.
    • (1983) Nucleic Acids Res , vol.11 , pp. 7537-7544
    • Jarsch, M.1    Böck, A.2
  • 41
    • 0027745825 scopus 로고
    • Effect of PCR conditions on the formation of heteroduplex and single-stranded DNA products in the amplification of bacterial ribosomal DNA spacer regions
    • Jensen, M. A. & Straus, N. (1993). Effect of PCR conditions on the formation of heteroduplex and single-stranded DNA products in the amplification of bacterial ribosomal DNA spacer regions. PCR Methods Appl 3, 186-194.
    • (1993) PCR Methods Appl , vol.3 , pp. 186-194
    • Jensen, M.A.1    Straus, N.2
  • 42
    • 0027461618 scopus 로고
    • Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms
    • Jensen, M. A., Webster, J. A. & Straus, N. (1993). Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms. Appl Environ Microbiol 59, 945-952.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 945-952
    • Jensen, M.A.1    Webster, J.A.2    Straus, N.3
  • 43
    • 0027520142 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA gene cluster from Streptomyces griseus subsp. griseus
    • Kim, E., Kim, H., Hong, S. P., Kang, K. H., Kho, Y. H. & Park, Y. H. (1993). Gene organization and primary structure of a ribosomal RNA gene cluster from Streptomyces griseus subsp. griseus. Gene 132, 21-31.
    • (1993) Gene , vol.132 , pp. 21-31
    • Kim, E.1    Kim, H.2    Hong, S.P.3    Kang, K.H.4    Kho, Y.H.5    Park, Y.H.6
  • 44
    • 0023664565 scopus 로고
    • Gene organization, transcription signals and processing of the single ribosomal RNA operon of the archaebacterium Thermoproteus tenax
    • Kjems, J., Leffers, H., Garrett, R. A., Wich, G., Leinfelder, W. & Böck, A. (1987). Gene organization, transcription signals and processing of the single ribosomal RNA operon of the archaebacterium Thermoproteus tenax. Nucleic Acids Res 15, 4821-4835.
    • (1987) Nucleic Acids Res , vol.15 , pp. 4821-4835
    • Kjems, J.1    Leffers, H.2    Garrett, R.A.3    Wich, G.4    Leinfelder, W.5    Böck, A.6
  • 45
    • 0026631487 scopus 로고
    • Molecular epidemiology of Pseudomonas cepacia determined by polymerase chain reaction ribotyping
    • Kostman, J. R., Edlind, T. D., LiPuma, J. J. & Stull, T. L. (1992). Molecular epidemiology of Pseudomonas cepacia determined by polymerase chain reaction ribotyping. J Clin Microbiol 30, 2084-2087.
    • (1992) J Clin Microbiol , vol.30 , pp. 2084-2087
    • Kostman, J.R.1    Edlind, T.D.2    LiPuma, J.J.3    Stull, T.L.4
  • 46
    • 0028847554 scopus 로고
    • A universal approach to bacterial molecular epidemiology by polymerase chain reaction ribotyping
    • Kostman, J. R., Alden, M. B., Mair, M., Edlind, T. D., LiPuma, J. J. & Stull, T. L. (1995). A universal approach to bacterial molecular epidemiology by polymerase chain reaction ribotyping. J Infect Dis 171, 204-208.
    • (1995) J Infect Dis , vol.171 , pp. 204-208
    • Kostman, J.R.1    Alden, M.B.2    Mair, M.3    Edlind, T.D.4    LiPuma, J.J.5    Stull, T.L.6
  • 47
    • 0026563857 scopus 로고
    • Phylogenetic relationships between the western aster yellows mycoplasmalike organism and other prokaryotes established by 16S rRNA gene sequence
    • Kuske, C. R. & Kirkpatrick, B. C. (1992). Phylogenetic relationships between the western aster yellows mycoplasmalike organism and other prokaryotes established by 16S rRNA gene sequence Int J Syst Bacteriol 42, 226-233.
    • (1992) Int J Syst Bacteriol , vol.42 , pp. 226-233
    • Kuske, C.R.1    Kirkpatrick, B.C.2
  • 49
    • 0028267828 scopus 로고
    • Detection and strain identification of Actinobacillus actinomycetemcomitans by nested PCR
    • Leys, E. J., Griffen, A. L., Strong, S. J. & Fuerst, P. A. (1994). Detection and strain identification of Actinobacillus actinomycetemcomitans by nested PCR. J Clin Microbiol 32, 1288-1294.
    • (1994) J Clin Microbiol , vol.32 , pp. 1288-1294
    • Leys, E.J.1    Griffen, A.L.2    Strong, S.J.3    Fuerst, P.A.4
  • 50
    • 0028859832 scopus 로고
    • Molecular typing of Borrelia burgdorferi sensu lato by PCR-restriction fragment length polymorphism analysis
    • Liveris, D., Gazumyan, A. & Schwartz, I. (1995). Molecular typing of Borrelia burgdorferi sensu lato by PCR-restriction fragment length polymorphism analysis. J Clin Microbiol 33, 589-595.
    • (1995) J Clin Microbiol , vol.33 , pp. 589-595
    • Liveris, D.1    Gazumyan, A.2    Schwartz, I.3
  • 51
    • 0020480196 scopus 로고
    • tRNA genes are found between 16S and 23S rRNA genes in Bacillus subtilis
    • Loughney, K., Lund, E. & Dahlberg, J. E. (1982). tRNA genes are found between 16S and 23S rRNA genes in Bacillus subtilis. Nucleic Acids Res 10, 1607-1624.
    • (1982) Nucleic Acids Res , vol.10 , pp. 1607-1624
    • Loughney, K.1    Lund, E.2    Dahlberg, J.E.3
  • 55
    • 0029097229 scopus 로고
    • Identification of novel insertion elements, restriction fragment length polymorphism patterns, and discontinuous 23S rRNA in lyme disease spirochetes: Phylogenetic analyses of rRNA genes and their intergenic spacers in Borrelia japonica sp. nov. and genomic group 21038 (Borrelia andersonii sp. nov.) isolates
    • Marconi, R. T., Liveris, D. & Schwartz, I. (1995). Identification of novel insertion elements, restriction fragment length polymorphism patterns, and discontinuous 23S rRNA in lyme disease spirochetes: phylogenetic analyses of rRNA genes and their intergenic spacers in Borrelia japonica sp. nov. and genomic group 21038 (Borrelia andersonii sp. nov.) isolates. J Clin Microbiol 33, 2427-2434.
    • (1995) J Clin Microbiol , vol.33 , pp. 2427-2434
    • Marconi, R.T.1    Liveris, D.2    Schwartz, I.3
  • 56
    • 0029070916 scopus 로고
    • PCR ribotyping and arbitrarily primed PCR for typing strains of Clostridium difficile from a Polish maternity hospital
    • Martirosian, G., Kuijpers, S., Verbrugh, H., van Belkum, A. & Meisel-Mikolajczyk, F. (1995). PCR ribotyping and arbitrarily primed PCR for typing strains of Clostridium difficile from a Polish maternity hospital. J Clin Microbiol 33, 2016-2021.
    • (1995) J Clin Microbiol , vol.33 , pp. 2016-2021
    • Martirosian, G.1    Kuijpers, S.2    Verbrugh, H.3    Van Belkum, A.4    Meisel-Mikolajczyk, F.5
  • 57
    • 0027312420 scopus 로고
    • Polymerase chain reaction-based restriction fragment length polymorphism analysis of a fragment of the ribosomal operon from Rochalimaea species for subtyping
    • Matar, G. M., Swaminathan, B., Hunter, S. B., Slater, L. N. & Welch, D. F. (1993). Polymerase chain reaction-based restriction fragment length polymorphism analysis of a fragment of the ribosomal operon from Rochalimaea species for subtyping. J Clin Microbiol 31, 1730-1734.
    • (1993) J Clin Microbiol , vol.31 , pp. 1730-1734
    • Matar, G.M.1    Swaminathan, B.2    Hunter, S.B.3    Slater, L.N.4    Welch, D.F.5
  • 58
    • 0028352269 scopus 로고
    • Characterization of the 16S-23S rRNA intergenic spacer of Bartonella bacilliformis
    • Minnick, M. F., Strange, J. C. & Williams, K. F. (1994). Characterization of the 16S-23S rRNA intergenic spacer of Bartonella bacilliformis. Gene 143, 149-150.
    • (1994) Gene , vol.143 , pp. 149-150
    • Minnick, M.F.1    Strange, J.C.2    Williams, K.F.3
  • 59
    • 0017375229 scopus 로고
    • Identification of spacer tRNA genes in individual ribosomal RNA transcription units of Escherichia coli
    • Morgan, E. A., Ikemura, T. & Nomura, M. (1977). Identification of spacer tRNA genes in individual ribosomal RNA transcription units of Escherichia coli. Proc Natl Acad Sci USA 74, 2710-2714.
    • (1977) Proc Natl Acad Sci USA , vol.74 , pp. 2710-2714
    • Morgan, E.A.1    Ikemura, T.2    Nomura, M.3
  • 60
    • 0023461268 scopus 로고
    • Specific synthesis of DNA in vitro via a polymerase-catalysed chain reaction
    • Mullis, K. B. & Faloona, F. A. (1987). Specific synthesis of DNA in vitro via a polymerase-catalysed chain reaction. Methods Enzymol 155, 335-350.
    • (1987) Methods Enzymol , vol.155 , pp. 335-350
    • Mullis, K.B.1    Faloona, F.A.2
  • 61
    • 0026735518 scopus 로고
    • Acholeplasma laidlawii has tRNA genes in the 16S-23S spacer of the rRNA operon
    • Nakagawa, T., Uemori, T., Asada, K., Kato, I. & Harasawa, R. (1992). Acholeplasma laidlawii has tRNA genes in the 16S-23S spacer of the rRNA operon. J Bacteriol 174, 8163-8165.
    • (1992) J Bacteriol , vol.174 , pp. 8163-8165
    • Nakagawa, T.1    Uemori, T.2    Asada, K.3    Kato, I.4    Harasawa, R.5
  • 63
    • 0028816633 scopus 로고
    • Epidemiological evaluation by PCR ribotyping of sporadic and outbreak-associated strains of Salmonella enterica serotype Typhimurium
    • Nastasi, A. & Mammina, C. (1995). Epidemiological evaluation by PCR ribotyping of sporadic and outbreak-associated strains of Salmonella enterica serotype Typhimurium. Res Microbiol 146, 99-106
    • (1995) Res Microbiol , vol.146 , pp. 99-106
    • Nastasi, A.1    Mammina, C.2
  • 64
    • 0026569655 scopus 로고
    • Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer
    • Navarro, E., Simonet, P., Normand, P. & Bardin, R. (1992). Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer. Arch Microbiol 157, 107-115.
    • (1992) Arch Microbiol , vol.157 , pp. 107-115
    • Navarro, E.1    Simonet, P.2    Normand, P.3    Bardin, R.4
  • 66
    • 0026603595 scopus 로고
    • Analysis of a ribosomal RNA operon in the actinomycete Frankia
    • Normand, P., Cournoyer, B., Simonet, P. & Nazaret, S. (1992). Analysis of a ribosomal RNA operon in the actinomycete Frankia. Gene 111, 119-124.
    • (1992) Gene , vol.111 , pp. 119-124
    • Normand, P.1    Cournoyer, B.2    Simonet, P.3    Nazaret, S.4
  • 67
    • 0028222591 scopus 로고
    • Genotypic and phenotypic diversity of Rhizobium isolated from chickpea (Cicer arietinum L.)
    • Nour, S. M., Cleyet-Marel, J.-C. Beck, D., Effosse, A. & Fernandez, M. P. (1994). Genotypic and phenotypic diversity of Rhizobium isolated from chickpea (Cicer arietinum L.). Can J Microbiol 40, 345-354.
    • (1994) Can J Microbiol , vol.40 , pp. 345-354
    • Nour, S.M.1    Cleyet-Marel, J.-C.2    Beck, D.3    Effosse, A.4    Fernandez, M.P.5
  • 68
    • 0028985136 scopus 로고
    • PCR differentiation of seventeen genospecies of Acinetobacter
    • Nowak, A., Burkiewicz, A. & Kur, J. (1995). PCR differentiation of seventeen genospecies of Acinetobacter. FEMS Microbiol Lett 126, 181-188.
    • (1995) FEMS Microbiol Lett , vol.126 , pp. 181-188
    • Nowak, A.1    Burkiewicz, A.2    Kur, J.3
  • 69
    • 0022350311 scopus 로고
    • Sequence of the 16S rRNA gene from the thermoacidophilic archaebacterium Sulfolobus solfataricus and its evolutionary implications
    • Olsen, G. J., Pace, N. R., Nuell, M., Kaine, B. P., Gupta, R. & Woese, C. R. (1985). Sequence of the 16S rRNA gene from the thermoacidophilic archaebacterium Sulfolobus solfataricus and its evolutionary implications. J Mol Evol 22, 301-307.
    • (1985) J Mol Evol , vol.22 , pp. 301-307
    • Olsen, G.J.1    Pace, N.R.2    Nuell, M.3    Kaine, B.P.4    Gupta, R.5    Woese, C.R.6
  • 70
    • 0025876851 scopus 로고
    • The ribosomal RNA database project
    • Olsen, G. J., Larsen, N. & Woese, C. R. (1991). The ribosomal RNA database project. Nucleic Acids Res 19 (suppl.), 2017-2021.
    • (1991) Nucleic Acids Res , vol.19 , Issue.SUPPL. , pp. 2017-2021
    • Olsen, G.J.1    Larsen, N.2    Woese, C.R.3
  • 71
    • 0024321833 scopus 로고
    • Organization and nucleotide sequence analysis of a ribosomal RNA gene cluster from Streptomyces ambofaciens
    • Pernodet, J.-L., Boccard, F., Alegre, M.-T., Gagnat, J. & Guerineau, M. (1989). Organization and nucleotide sequence analysis of a ribosomal RNA gene cluster from Streptomyces ambofaciens. Gene 79, 33-46.
    • (1989) Gene , vol.79 , pp. 33-46
    • Pernodet, J.-L.1    Boccard, F.2    Alegre, M.-T.3    Gagnat, J.4    Guerineau, M.5
  • 72
    • 0028347195 scopus 로고
    • Identification of Agrobacterium strains by PCR-RFLP analysis of pTi and chromosomal regions
    • Ponsonnet, C. & Nesme, X. (1994). Identification of Agrobacterium strains by PCR-RFLP analysis of pTi and chromosomal regions. Arch Microbiol 161, 300-309.
    • (1994) Arch Microbiol , vol.161 , pp. 300-309
    • Ponsonnet, C.1    Nesme, X.2
  • 73
    • 0026905890 scopus 로고
    • DNA probes for Bordetella species and a colorimetric reverse hybridization assay for the detection of Bordetella pertussis
    • Rossau, R., Michielsen, A., Jannes, G., Duhamel, M., Kersters, K. & van Heuverswyn, H. (1992). DNA probes for Bordetella species and a colorimetric reverse hybridization assay for the detection of Bordetella pertussis. Mol Cell Probes 6, 281-289.
    • (1992) Mol Cell Probes , vol.6 , pp. 281-289
    • Rossau, R.1    Michielsen, A.2    Jannes, G.3    Duhamel, M.4    Kersters, K.5    Van Heuverswyn, H.6
  • 74
    • 0029007998 scopus 로고
    • Inter- and intraspecies identification of Bartonella (Rochalimaea) species
    • Roux, V. & Raoult, D. (1995a). Inter- and intraspecies identification of Bartonella (Rochalimaea) species. J Clin Microbiol 33, 1573-1579.
    • (1995) J Clin Microbiol , vol.33 , pp. 1573-1579
    • Roux, V.1    Raoult, D.2
  • 75
    • 0028923875 scopus 로고
    • The 16S-23S rRNA intergenic spacer region of Bartonella (Rochalimaea) species is longer than usually described in other bacteria
    • Roux, V. & Raoult, D. (1995b). The 16S-23S rRNA intergenic spacer region of Bartonella (Rochalimaea) species is longer than usually described in other bacteria. Gene 156, 107-111.
    • (1995) Gene , vol.156 , pp. 107-111
    • Roux, V.1    Raoult, D.2
  • 76
    • 0001586023 scopus 로고
    • Organization of the 16S-23S intergenic spacer region of the two rRNA operons from Thiobacillus ferooxidans
    • Sagredo, B., Jedlicki, E. & Orellana, O. (1992). Organization of the 16S-23S intergenic spacer region of the two rRNA operons from Thiobacillus ferooxidans. Geomicrobiol J 10, 239-247.
    • (1992) Geomicrobiol J , vol.10 , pp. 239-247
    • Sagredo, B.1    Jedlicki, E.2    Orellana, O.3
  • 77
    • 0028117694 scopus 로고
    • Genotyping of Streptococcus thermophilus evidenced by restriction analysis of ribosomal DNA
    • Salzano, G., Moschetti, G., Villani, F., Pepe, O., Mauriello, G. & Coppola, S. (1994). Genotyping of Streptococcus thermophilus evidenced by restriction analysis of ribosomal DNA. Res Microbiol 145, 651-658.
    • (1994) Res Microbiol , vol.145 , pp. 651-658
    • Salzano, G.1    Moschetti, G.2    Villani, F.3    Pepe, O.4    Mauriello, G.5    Coppola, S.6
  • 78
    • 0021177050 scopus 로고
    • Organization of ribosomal RNA genes in Mycoplasma capricolum
    • Sawada, M., Muto, A., Iwami, M., Yamao, F. & Osawa, S. (1984). Organization of ribosomal RNA genes in Mycoplasma capricolum. Mol & Gen Genet 196, 311-316.
    • (1984) Mol & Gen Genet , vol.196 , pp. 311-316
    • Sawada, M.1    Muto, A.2    Iwami, M.3    Yamao, F.4    Osawa, S.5
  • 79
    • 0027298848 scopus 로고
    • Characterization of intergenic spacers in two rrn operons of Enterococcus birae ATCC 9790
    • Sechi, L. A. & Daneo-Moore, L. (1993). Characterization of intergenic spacers in two rrn operons of Enterococcus birae ATCC 9790. J Bacteriol 175, 3213-3219.
    • (1993) J Bacteriol , vol.175 , pp. 3213-3219
    • Sechi, L.A.1    Daneo-Moore, L.2
  • 80
    • 0000023099 scopus 로고
    • Attachment of a 40-base-pair G+C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes
    • Sheffield, V. C., Cox, D. R., Lerman, L. S. & Myers, R. M. (1989). Attachment of a 40-base-pair G+C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes. Proc Natl Acad Sci USA 86, 232-236.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 232-236
    • Sheffield, V.C.1    Cox, D.R.2    Lerman, L.S.3    Myers, R.M.4
  • 82
    • 0023991789 scopus 로고
    • Molecular cloning and characterization of an rRNA operon in Streptomyces lividans TK21
    • Suzuki, Y., Ono, Y., Nagata, A. & Yamada, T. (1988). Molecular cloning and characterization of an rRNA operon in Streptomyces lividans TK21. J Bacteriol 170, 1631-1636.
    • (1988) J Bacteriol , vol.170 , pp. 1631-1636
    • Suzuki, Y.1    Ono, Y.2    Nagata, A.3    Yamada, T.4
  • 83
    • 0022897982 scopus 로고
    • Analysis of transcription and processing signals of the 16S-23S rRNA operon of Mycoplasma hyopneumoniae
    • Taschke, C. & Herrmann, R. (1986). Analysis of transcription and processing signals of the 16S-23S rRNA operon of Mycoplasma hyopneumoniae. Mol & Gen Genet 205, 434-441.
    • (1986) Mol & Gen Genet , vol.205 , pp. 434-441
    • Taschke, C.1    Herrmann, R.2
  • 84
    • 0028173127 scopus 로고
    • The 16S/23S ribosomal spacer region of Coxiella burnetii
    • Thiele, D., Willems, H. & Krauss, H. (1994). The 16S/23S ribosomal spacer region of Coxiella burnetii. Eur J Epidemiol 10, 421-426.
    • (1994) Eur J Epidemiol , vol.10 , pp. 421-426
    • Thiele, D.1    Willems, H.2    Krauss, H.3
  • 85
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalities and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalities and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 87
    • 0026680676 scopus 로고
    • Amplification of the 16S-23S spacer region in rRNA operons of Mycoplasmas by the polymerase chain reaction
    • Uemori, T., Asada, K., Kato, I. & Harasawa, R. (1992). Amplification of the 16S-23S spacer region in rRNA operons of Mycoplasmas by the polymerase chain reaction. Syst Appl Microbiol 15, 181-186.
    • (1992) Syst Appl Microbiol , vol.15 , pp. 181-186
    • Uemori, T.1    Asada, K.2    Kato, I.3    Harasawa, R.4
  • 89
    • 0025269309 scopus 로고
    • Detecting base pair substitutions in DNA fragments by temperature-gradient gel electrophoresis
    • Wartell, R. M., Hosseini, S. H. & Moran, C. P. (1990). Detecting base pair substitutions in DNA fragments by temperature-gradient gel electrophoresis. Nucleic Acids Res 18, 2699-2705.
    • (1990) Nucleic Acids Res , vol.18 , pp. 2699-2705
    • Wartell, R.M.1    Hosseini, S.H.2    Moran, C.P.3
  • 90
    • 0027537760 scopus 로고
    • Differences in the hybridization pattern of Bacillus subtilis genes coding for rRNA depend on the method of DNA preparation
    • Waterhouse, R. N. & Glover, L. A. (1993). Differences in the hybridization pattern of Bacillus subtilis genes coding for rRNA depend on the method of DNA preparation. Appl Environ Microbiol 59, 919-921.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 919-921
    • Waterhouse, R.N.1    Glover, L.A.2
  • 91
    • 0038497542 scopus 로고
    • Molecular structure of nucleic acids: A structure for deoxyribose nucleic acid
    • Watson, J. D. & Crick, F. H. C. (1953). Molecular structure of nucleic acids: a structure for deoxyribose nucleic acid. Nature 171, 737-738.
    • (1953) Nature , vol.171 , pp. 737-738
    • Watson, J.D.1    Crick, F.H.C.2
  • 93
    • 0026067797 scopus 로고
    • 16S ribosomal DNA amplification for phylogenetic study
    • Weisburg, W. G., Barns, S. M., Pelletier, D. A. & Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173, 697-703.
    • (1991) J Bacteriol , vol.173 , pp. 697-703
    • Weisburg, W.G.1    Barns, S.M.2    Pelletier, D.A.3    Lane, D.J.4
  • 94
    • 0029013127 scopus 로고
    • Heterogeneity among 16S-23S rRNA intergenic spacers of species within the 'Streptococcus milleri group'
    • Whiley, R. A., Duke, B., Hardie, J. M. & Hall, L. M. C. (1995). Heterogeneity among 16S-23S rRNA intergenic spacers of species within the 'Streptococcus milleri group'. Microbiology 141, 1461-1467.
    • (1995) Microbiology , vol.141 , pp. 1461-1467
    • Whiley, R.A.1    Duke, B.2    Hardie, J.M.3    Hall, L.M.C.4
  • 95
    • 0028018243 scopus 로고
    • Mycobacterium leprae isolates from different sources have identical sequences of the spacer region between the 16S and 23S ribosomal RNA genes
    • de Wit, M. Y. L. & Klatser, P. R. (1994). Mycobacterium leprae isolates from different sources have identical sequences of the spacer region between the 16S and 23S ribosomal RNA genes. Microbiology 140, 1983-1987.
    • (1994) Microbiology , vol.140 , pp. 1983-1987
    • De Wit, M.Y.L.1    Klatser, P.R.2
  • 96
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese, C. R. (1987). Bacterial evolution. Microbiol Rev 51, 221-271.
    • (1987) Microbiol Rev , vol.51 , pp. 221-271
    • Woese, C.R.1
  • 97
    • 0018786652 scopus 로고
    • Sequence of the 16S-23S spacer region in two ribosomal RNA operons of Escherichia coli
    • Young, R. A., Macklis, R. & Steitz, J. A. (1979). Sequence of the 16S-23S spacer region in two ribosomal RNA operons of Escherichia coli. J Biol Chem 254, 3264-3271.
    • (1979) J Biol Chem , vol.254 , pp. 3264-3271
    • Young, R.A.1    Macklis, R.2    Steitz, J.A.3
  • 98
    • 0020404141 scopus 로고
    • Molecular cloning of the ribosomal RNA genes of the photosynthetic bacterium Rhodopseudomonas capsulata
    • Yu, P.-L., Hohn, B., Falk, H. & Drews, G. (1982). Molecular cloning of the ribosomal RNA genes of the photosynthetic bacterium Rhodopseudomonas capsulata. Mol & Gen Genet 188, 392-398.
    • (1982) Mol & Gen Genet , vol.188 , pp. 392-398
    • Yu, P.-L.1    Hohn, B.2    Falk, H.3    Drews, G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.