Simultaneous and bidirectional transport of kinesin-coated microspheres and dynein-coated microspheres on polarity-oriented microtubules

Biotechnology and Bioengineering

Volumn 101, Issue 1, 2008, Pages 1-8

  Yokokawa, Ryuji ^a   Tarhan, Mehmet Cagatay ^b   Kon, Takahide ^c   Fujita, Hiroyuki ^b  

^a RITSUMEIKAN UNIVERSITY   (Japan)

^b INSTITUTE OF INDUSTRIAL SCIENCE   (Japan)

^c UNIVERSITY OF TOKYO   (Japan)

Author keywords

Biomimetics; Dynein; Kinesin; MEMS; MicroTAS; Nanomanipulation; Nanotransport

Indexed keywords

ALDEHYDES; CHLORINE COMPOUNDS; FLUIDIC DEVICES; FREIGHT TRANSPORTATION; MOLECULAR ORIENTATION; MOTORS; NANOFLUIDICS;

BIOMIMETICS; CARGO TRANSPORT; DYNEIN; GLUTARALDEHYDE; IN-VITRO; INTRACELLULAR TRANSPORT; KINESIN; MEAN VELOCITIES; MEMS; MICRO FLUIDIC SYSTEMS; MICRO-FLUIDIC CHANNELS; MICROTAS; MICROTUBULE; MICROTUBULES; MOLECULAR SYSTEMS; MOTOR PROTEINS; NANO-ACTUATORS; NANOMANIPULATION; NANOTRANSPORT; STATISTICAL ANALYSIS; UNIDIRECTIONAL TRANSPORT;

MICROSPHERES;

DYNEIN ADENOSINE TRIPHOSPHATASE; GLUTARALDEHYDE; KINESIN; MICROSPHERE;

ARTICLE; BIOMIMETICS; HYDRODYNAMICS; MICROFLUIDIC ANALYSIS; MICROTUBULE ASSEMBLY; MOLECULAR SYSTEMATICS; PROTEIN IMMOBILIZATION; PROTEIN TRANSPORT;

ADSORPTION; COATED MATERIALS, BIOCOMPATIBLE; DYNEIN ATPASE; ELECTROSTATICS; KINESIN; MATERIALS TESTING; MICROSPHERES; MOLECULAR CONFORMATION; MOLECULAR MOTOR PROTEINS; MOTION; PROTEIN BINDING;

EID: 50049135632     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.21874     Document Type: Article

References (53)

1. Bachand GD, Rivera SB, Boal AK, Gaudioso J, Liu J, Bunker BC. 2004. Assembly and transport of nanocrystal CdSe quantum dot nanocomposites using microtubules and kinesin motor proteins. Nano Lett 4(5):817-821.
2. Block SM, Goldstein LS, Schnapp BJ. 1990. Bead movement by single kinesin molecules studied with optical tweezers. Nature 348(6299):348-352.
3. Bohm K, Stracke R, Muhlig P, Unger E. 2001. Motor protein-driven unidirectional transport of micrometer-sized cargoes across isopolar microtubule arrays. Nanotechnology 12:238-244.
4. Brown TB, Hancock WO. 2002. A polarized microtubule array for kinesin-powered nanoscale assembly and force generation. Nano Lett 2(10):1131-1135.
5. Cheng LJ, Kao MT, Meyhofer E, Guo LJ. 2005. Highly efficient guiding of microtubule transport with imprinted CYTOP nanotracks. Small 1(4):409-414.
6. Clemmens J, Hess H, Howard J, Vogel V. 2003a. Analysis of microtubule guidance in open microfabricated channels coated with the motor protein kinesin. Langmuir 19(5):1738-1744.
7. Clemmens J, Hess H, Lipscomb R, Hanein Y, Bohringer KF, Matzke CM, Bachand GD, Bunker BC, Vogel V. 2003b. Mechanisms of microtubule guiding on microfabricated kinesin-coated surfaces: chemical and topographic surface patterns. Langmuir 19(26):10967-10974.
8. Clemmens J, Hess H, Doot R, Matzke CM, Bachand GD, Vogel V. 2004. Motor-protein "roundabouts": Microtubules moving on kinesin-coated tracks through engineered networks. Lab Chip 4(2):83-86.
9. Dennis JR, Howard J, Vogel V. 1999. Molecular shuttles: Directed motion of microtubules along nanoscale kinesin tracks. Nanotechnology 10:232-236.
10. Diez S, Reuther C, Dinu C, Seidel R, Mertig M, Pompe W, Howard J. 2003. Stretching and transporting DNA molecules using motor proteins. Nano Lett 3(9):1251-1254.
11. Dinu CZ, Opitz J, Pompe W, Howard J, Mertig M, Diez S. 2006. Parallel manipulation of bifunctional DNA molecules on structured surfaces using kinesin-driven microtubules. Small 2(8-9):1090-1098.
12. Doot RK, Hess H, Vogel V. 2007. Engineered networks of oriented microtubule filaments for directed cargo transport. Soft Matter 3:349-356.
13. Du YZ, Hiratsuka Y, Taira S, Eguchi M, Uyeda TQ, Yumoto N, Kodaka M. 2005. Motor protein nano-biomachine powered by self-supplying ATP. Chem Commun (16):2080-2082.
14. Hess H, Vogel V. 2001. Molecular shuttles based on motor proteins: Active transport in synthetic environments. J Biotechnol 82(1):67-85.
15. Hess H, Clemmens J, Qin D, Howard J, Vogel V. 2001. Light-controlled molecular shuttles made from motor proteins carrying cargo on engineered surfaces. Nano Lett 1(5):235-239.
16. Hess H, Clemmens J, Matzke CM, Bachand GD, Bunker BC, Vogel V. 2002. Ratchet patterns sort molecular shuttles. Appl Phys A: Mater Sci Process 75(2):309-313.
17. Hess H, Matzke CM, Doot RK, Clemmens J, Bachand GD, Bunker BC, Vogel V. 2003. Molecular shuttles operating undercover: A new photolithographic approach for the fabrication of structured surfaces supporting directed motility. Nano Lett 3(12):1651-1655.
18. Hirakawa E, Higuchi H, Toyoshima YY. 2000. Processive movement of single 22S dynein molecules occurs only at low ATP concentrations. Proc Natl Acad Sci USA 97(6):2533-2537.
19. Hiratsuka Y, Tada T, Oiwa K, Kanayama T, Uyeda TQ. 2001. Controlling the direction of kinesin-driven microtubule movements along microlithographic tracks. Biophys J 81(3):1555-1561.
20. Howard J, Hudspeth AJ, Vale R. 1989. Movement of microtubules by single kinesin molecules. Nature 342(9):154-159.
21. Hyman A, Drechsel D, Kellogg D, Salser S, Sawin K, Steffen P, Wordeman L, Mitchison T. 1991. Preparation of modified tubulins. Methods Enzymol 196:478-485.
22. Jia L, Moorjani SG, Jackson TN, Hancock WO. 2004. Microscale transport and sorting by kinesin molecular motors. Biomed Microdev 6(1):67-74.
23. Kim T, Kao M-T, Meyhofer E, Hasselbrink EF. 2007a. Biomolecular motor-driven microtubule translocation in the presence of shear flow: Analysis of redirection behaviours. Nanotechnology 18(2):025101.
24. Kim T, Kao MT, Hasselbrink EF, Meyhofer E. 2007b. Active alignment of microtubules with electric fields. Nano Lett 7(1):211-217.
25. King SJ, Schroer TA. 2000. Dynactin increases the processivity of the cytoplasmic dynein motor. Nat Cell Biol 2(1):20-24.
26. Kojima H, Muto E, Higuchi H, Yanagida T. 1997. Mechanics of single kinesin molecules measured by optical trapping nanometry. Biophys J 73:2012-2022.
27. Kon T, Mogami T, Ohkura R, Nishiura M, Sutoh K. 2005. ATP hydrolysis cycle-dependent tail motions in cytoplasmic dynein. Nat Struct Mol Biol 12(6):513-519.
28. Limberis L, Stewart R. 2000. Toward kinesin-powered microdevices. Nanotechnology 11:47-51.
29. Limberis L, Magda JJ, Stewart RJ. 2001. Polarized alignment and surface immobilization of microtubules for kinesin-powered nanodevices. Nano Lett 1(5):277-280.
30. Meyhofer E, Howard J. 1995. The force generated by a single kinesin molecule against an elastic load. Proc Natl Acad Sci USA 92(2):574-578.
31. Moorjani SG, Jia L, Jackson TN, Hancock WO. 2003. Lithographically patterned channels spatially segregate kinesin motor activity and effectively guide microtubule movements. Nano Lett 3(5):633-637.
32. Muthukrishnan G, Hutchins BM, Williams ME, Hancock WO. 2006. Transport of semiconductor nanocrystals by kinesin molecular motors. Small 2(5):626-630.
33. Nishiura M, Kon T, Shiroguchi K, Ohkura R, Shima T, Toyoshima YY, Sutoh K. 2004. A single-headed recombinant fragment of Dictyostelium cytoplasmic dynein can drive the robust sliding of microtubules. J Biol Chem 279(22):22799-22802.
34. Prots I, Stracke R, Unger E, Bohm K. 2003. Isopolar microtubule arrays as a tool to determine motor protein directionality. Cell Biol Int 27:251-253.
35. Ramachandran S, Ernst KH, Bachand GD, Vogel V, Hess H. 2006. Selective loading of kinesin-powered molecular shuttles with protein cargo and its application to biosensing. Small 2(3):330-334.
36. Shima T, Imamula K, Kon T, Ohkura R, Sutoh K. 2006. Head-head coordination is required for the processive motion of cytoplasmic dynein, an AAA+ molecular motor. J Struct Biol 156(1):182-189.
37. Stracke R, Bohm KJ, Burgold J, Schacht H, Unger E. 2000. Physical and technical parameters determining the functioning of a kinesin-based cell-free motor system. Nanotechnology 11:52-56.
38. Svoboda K, Schmidt C, Schnapp B, Block S. 1993. Direct observation of kinesin stepping by optical trapping interferometry. Nature 365(21):721-727.
39. Toba S, Watanabe TM, Yamaguchi-Okimoto L, Toyoshima YY, Higuchi H. 2006. Overlapping hand-over-hand mechanism of single molecular motility of cytoplasmic dynein. Proc Natl Acad Sci USA 103(15):5741-5745.
40. Turner DC, Chang C, Fang K, Brandow SL, Murphy DB. 1995. Selective adhesion of functional microtubules to patterned silane surfaces. Biophys J 69(6):2782-2789.
41. Turner D, Chang C, Fang K, Cuomo P, Murphy D. 1996. Kinesin movement on glutaraldehyde-fixed microtubules. Anal Biochem 242(1):20-25.
42. Vale RD. 1987. Intracellular transport using microtubule-based motors. Annu Rev Cell Biol 3:347-378.
43. Vale RD. 2003. The molecular motor toolbox for intracellular transport. Cell 112(4):467-480.
44. van den Heuvel MG, Dekker C. 2007. Motor proteins at work for nanotechnology. Science 317(5836):333-336.
45. van den Heuvel MG, Butcher CT, Smeets RM, Diez S, Dekker C. 2005. High rectifying efficiencies of microtubule motility on kinesin-coated gold nanostructures. Nano Lett 5(6):1117-1122.
46. van den Heuvel MG, de Graaff MP, Dekker C. 2006. Molecular sorting by electrical steering of microtubules in kinesin-coated channels. Science 312(5775):910-914.
47. Williams RC, Jr., Lee JC. 1982. Preparation of tubulin from brain. Methods Enzymol 85 (Pt B): 376-385.
48. Yokokawa R, Takeuchi S, Kon T, Nishiura M, Ohkura R, Edamatsu M, Sutoh K, Fujita H. 2004a. Hybrid nanotransport system by biomolecular linear motors. IEEE/ASME J Microelectromech Syst 13:612-619.
49. Yokokawa R, Takeuchi S, Kon T, Nishiura M, Sutoh K, Fujita H. 2004b. Unidirectional transport of kinesin-coated beads on microtubules oriented in a microfluidic device. Nano Lett 4(11):2265-2270.
50. Yokokawa R, Yoshida Y, Takeuchi S, Kon T, Sutoh K, Fujita H. 2005. Evaluation of cryopreserved microtubules immobilized in microfluidic channels for bead-assay-based transportation system. IEEE Trans Adv Packaging 28(4):577-583.
51. Yokokawa R, Yumi Y, Takeuchi S, Kon T, Fujita H. 2006. Unidirectional transport of a bead on a single microtubule immobilized in a submicrometre channel. Nanotechnology 17(1):289-294.
52. Yokokawa R, Murakami T, Sugie T, Kon T. 2008. Polarity orientation of microtubules utilizing dynein-based gliding assay. Nanotechnology 19 125505. 7p. DOI: 10.1088/0957-4484/19/12/125505.
53. Yoshida Y, Yokokawa R, Suzuki H, Atsuta K, Fujita H, Takeuchi S. 2006. Biomolecular linear motors confined to move upon micro-patterns on glass. J Micromech Microeng 16:1550-1554.