-
1
-
-
0037435030
-
Mass spectrometry-based proteomics
-
Aebersold R, Mann M. Mass spectrometry-based proteomics. Nature, 2003, 422(6928): 198-207
-
(2003)
Nature
, vol.422
, Issue.6928
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
2
-
-
20544435982
-
Proteomics: From gel based to gel free
-
Lambert J P, Ethier M, Smith J C, et al. Proteomics: from gel based to gel free. Anal Chem, 2005, 77(12): 3771-3788
-
(2005)
Anal Chem
, vol.77
, Issue.12
, pp. 3771-3788
-
-
Lambert, J.P.1
Ethier, M.2
Smith, J.C.3
-
3
-
-
0033051101
-
Direct analysis of protein complexes using mass spectrometry
-
Link A J, Eng J, Schieltz D, et al. Direct analysis of protein complexes using mass spectrometry. Nat Biotechnol, 1999, 17(7): 676-682
-
(1999)
Nat Biotechnol
, vol.17
, Issue.7
, pp. 676-682
-
-
Link, A.J.1
Eng, J.2
Schieltz, D.3
-
4
-
-
0033016717
-
Correlation between protein and mRNA abundance in yeast
-
Gygi S P, Rochon Y, Franza B R, et al. Correlation between protein and mRNA abundance in yeast. Mol Cell Biol, 1999, 19(3): 1720-1730
-
(1999)
Mol Cell Biol
, vol.19
, Issue.3
, pp. 1720-1730
-
-
Gygi, S.P.1
Rochon, Y.2
Franza, B.R.3
-
5
-
-
0036468595
-
Two-dimensional gel electrophoresis: Recent advances in sample preparation, detection and quantitation
-
Lilley K S, Razzaq A, Dupree P. Two-dimensional gel electrophoresis: recent advances in sample preparation, detection and quantitation. Curr Opin Chem Biol, 2002, 6(1): 46-50
-
(2002)
Curr Opin Chem Biol
, vol.6
, Issue.1
, pp. 46-50
-
-
Lilley, K.S.1
Razzaq, A.2
Dupree, P.3
-
6
-
-
10744233766
-
Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards
-
Wang W, Zhou H, Lin H, et al. Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards. Anal Chem, 2003, 75(18): 4818-4826
-
(2003)
Anal Chem
, vol.75
, Issue.18
, pp. 4818-4826
-
-
Wang, W.1
Zhou, H.2
Lin, H.3
-
7
-
-
0035582244
-
An automated multidimensional protein identification technology for shotgun proteomics
-
Wolters D A, Washburn M P, Yates J R. An automated multidimensional protein identification technology for shotgun proteomics. Anal Chem, 2001, 73(22): 5683-5690
-
(2001)
Anal Chem
, vol.73
, Issue.22
, pp. 5683-5690
-
-
Wolters, D.A.1
Washburn, M.P.2
Yates, J.R.3
-
8
-
-
0042386232
-
Exploiting the complementary nature of LC/MALDI/MS/MS and LC/ESI/MS/MS for increased proteome coverage
-
Bodnar W M, Blackburn R K, Krise J M, et al. Exploiting the complementary nature of LC/MALDI/MS/MS and LC/ESI/MS/MS for increased proteome coverage. J Am Soc Mass Spectrom, 2003, 14(9): 971-979
-
(2003)
J Am Soc Mass Spectrom
, vol.14
, Issue.9
, pp. 971-979
-
-
Bodnar, W.M.1
Blackburn, R.K.2
Krise, J.M.3
-
9
-
-
34250657012
-
Quantitative proteome analysis using isotope-coded affinity tags and mass spectrometry
-
Shiio Y, Aebersold R. Quantitative proteome analysis using isotope-coded affinity tags and mass spectrometry. Nat Protoc, 2006, 1(1): 139-145
-
(2006)
Nat Protoc
, vol.1
, Issue.1
, pp. 139-145
-
-
Shiio, Y.1
Aebersold, R.2
-
10
-
-
34247341829
-
Proteomics discovery of metalloproteinase substrates in the cellular context by iTRAQTM labeling reveals a diverse MMP-2 substrate degradome
-
Dean R A, Overall C M. Proteomics discovery of metalloproteinase substrates in the cellular context by iTRAQTM labeling reveals a diverse MMP-2 substrate degradome. Mol Cell Proteomics, 2007, (4): 611-623
-
(2007)
Mol Cell Proteomics
, vol.4
, pp. 611-623
-
-
Dean, R.A.1
Overall, C.M.2
-
13
-
-
0037442315
-
Abundance ratio dependent proteomics analysis by mass spectrometry
-
Griffin T J, Lock C M, Li X, et al. Abundance ratio dependent proteomics analysis by mass spectrometry. Anal Chem, 2003, 75(4): 867-874
-
(2003)
Anal Chem
, vol.75
, Issue.4
, pp. 867-874
-
-
Griffin, T.J.1
Lock, C.M.2
Li, X.3
-
14
-
-
33645721632
-
Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
-
Anderson L, Hunter C L. Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins. Mol Cell Proteomics, 2006, 5(4): 573-588
-
(2006)
Mol Cell Proteomics
, vol.5
, Issue.4
, pp. 573-588
-
-
Anderson, L.1
Hunter, C.L.2
-
15
-
-
0348142993
-
Changes in the protein expression of yeast as a function of carbon source
-
Gao J, Opiteck G J, Friedrichs M S, et al. Changes in the protein expression of yeast as a function of carbon source. J Proteome Res, 2003, 2(6): 643-649
-
(2003)
J Proteome Res
, vol.2
, Issue.6
, pp. 643-649
-
-
Gao, J.1
Opiteck, G.J.2
Friedrichs, M.S.3
-
16
-
-
26844559000
-
Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
-
Ishihama Y, Oda Y, Tabata T, et al. Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol Cell Proteomics, 2005, 4(9): 1265-1272
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.9
, pp. 1265-1272
-
-
Ishihama, Y.1
Oda, Y.2
Tabata, T.3
-
17
-
-
34547143630
-
Analysis of human liver proteome using replicate shotgun strategy
-
Chen M, Ying W, Song Y, et al. Analysis of human liver proteome using replicate shotgun strategy. Proteomics, 2007, 7(14): 2479-2488
-
(2007)
Proteomics
, vol.7
, Issue.14
, pp. 2479-2488
-
-
Chen, M.1
Ying, W.2
Song, Y.3
-
18
-
-
33644864034
-
Challenges in deriving high-confidence protein identifications from data gathered by a HUPO plasma proteome collaborative study
-
States D J, Omenn G S, Blackwell T W, et al. Challenges in deriving high-confidence protein identifications from data gathered by a HUPO plasma proteome collaborative study. Nat Biotechnol, 2006, 24(3): 333-338
-
(2006)
Nat Biotechnol
, vol.24
, Issue.3
, pp. 333-338
-
-
States, D.J.1
Omenn, G.S.2
Blackwell, T.W.3
-
19
-
-
33746285299
-
Label-free quantitative proteomics using large peptide data sets generated by nanoflow liquid chromatography and mass spectrometry
-
Ono M, Shitashige M, Honda K, et al. Label-free quantitative proteomics using large peptide data sets generated by nanoflow liquid chromatography and mass spectrometry. Mol Cell Proteomics, 2006, 5(7): 1338-1347
-
(2006)
Mol Cell Proteomics
, vol.5
, Issue.7
, pp. 1338-1347
-
-
Ono, M.1
Shitashige, M.2
Honda, K.3
-
20
-
-
3543005925
-
Cluster analysis of mass spectrometry data reveals a novel component of SAGA
-
Powell D W, Weaver C M, Jennings J L, et al. Cluster analysis of mass spectrometry data reveals a novel component of SAGA. Mol Cell Biol, 2004, 24(16): 7249-7259
-
(2004)
Mol Cell Biol
, vol.24
, Issue.16
, pp. 7249-7259
-
-
Powell, D.W.1
Weaver, C.M.2
Jennings, J.L.3
-
21
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu H, Sadygov R G, Yates J R. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem, 2004, 76(14): 4193-4201
-
(2004)
Anal Chem
, vol.76
, Issue.14
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates, J.R.3
-
22
-
-
33646564676
-
Label-Free protein quantification using LC-coupled ion trap or FT mass spectrometry: Reproducibility, linearity, and application with complex proteomes
-
Wang G, Wu W W, Zeng W, et al. Label-Free protein quantification using LC-coupled ion trap or FT mass spectrometry: reproducibility, linearity, and application with complex proteomes. J Proteome Res, 2006, 5(5): 1214-1223
-
(2006)
J Proteome Res
, vol.5
, Issue.5
, pp. 1214-1223
-
-
Wang, G.1
Wu, W.W.2
Zeng, W.3
-
23
-
-
27644543078
-
Comparison of label-free methods for quantifying human proteins by shotgun proteomics
-
Old W M, Meyer-Arendt K, Aveline-Wolf L, et al. Comparison of label-free methods for quantifying human proteins by shotgun proteomics. Mol Cell Proteomics, 2005, 4(10): 1487-1502
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.10
, pp. 1487-1502
-
-
Old, W.M.1
Meyer-Arendt, K.2
Aveline-Wolf, L.3
-
24
-
-
0038182537
-
HBXIP functions as a cofactor of survivin in apoptosis supp ression
-
Marusawa H, Matsuzawa S, Welsh K, et al. HBXIP functions as a cofactor of survivin in apoptosis supp ression. EMBO J, 2003, 22 (11): 2729-2740
-
(2003)
EMBO J
, vol.22
, Issue.11
, pp. 2729-2740
-
-
Marusawa, H.1
Matsuzawa, S.2
Welsh, K.3
-
25
-
-
25444518263
-
Hypoxia upregulates the expression of the NDRG1 gene leading to its overexpression in various human cancers
-
Cangul, Hypoxia upregulates the expression of the NDRG1 gene leading to its overexpression in various human cancers. BMC Genet, 2004, 5: 27
-
(2004)
BMC Genet
, vol.5
, pp. 27
-
-
Cangul1
-
26
-
-
33847097342
-
Hypoxia increases cytoplasmic expression of NDRG1, but is insufficient for its membrane localization in human hepatocellular carcinoma
-
Sibold S, Roh V, Keogh A, et al. Hypoxia increases cytoplasmic expression of NDRG1, but is insufficient for its membrane localization in human hepatocellular carcinoma. FEBS Lett, 2007, 581(5): 989-994
-
(2007)
FEBS Lett
, vol.581
, Issue.5
, pp. 989-994
-
-
Sibold, S.1
Roh, V.2
Keogh, A.3
-
27
-
-
0033542425
-
Prohibitin, a potential tumor suppressor, interacts with RB and regulates E2F function
-
Wang S, Nath N, Adlam M, et al. Prohibitin, a potential tumor suppressor, interacts with RB and regulates E2F function. Oncogene, 1999, 18(23): 3501-3510
-
(1999)
Oncogene
, vol.18
, Issue.23
, pp. 3501-3510
-
-
Wang, S.1
Nath, N.2
Adlam, M.3
-
28
-
-
33845970253
-
Mitochondrial functions and estrogen receptor-dependent nuclear translocation of pleiotropic human prohibitin 2
-
Kasashima K, Ohta E, Kagawa Y, et al. Mitochondrial functions and estrogen receptor-dependent nuclear translocation of pleiotropic human prohibitin 2. J Biol Chem, 2006, 281(47): 36401-36410
-
(2006)
J Biol Chem
, vol.281
, Issue.47
, pp. 36401-36410
-
-
Kasashima, K.1
Ohta, E.2
Kagawa, Y.3
-
29
-
-
34249942508
-
Transketolase protein TKTL1 overexpression: A potential biomarker and therapeutic target in breast cancer
-
Foldi M, Stickeler E, Bau L, et al. Transketolase protein TKTL1 overexpression: A potential biomarker and therapeutic target in breast cancer. Oncol Rep, 2007, 17(4): 841-845
-
(2007)
Oncol Rep
, vol.17
, Issue.4
, pp. 841-845
-
-
Foldi, M.1
Stickeler, E.2
Bau, L.3
-
30
-
-
0242606282
-
Heat shock protein 70 binding inhibits the nuclear import of apoptosis-inducing
-
Gurbuxani S, Schmitt E, Cande C, et al. Heat shock protein 70 binding inhibits the nuclear import of apoptosis-inducing. Oncogene, 2003, 22(43): 6669-6678
-
(2003)
Oncogene
, vol.22
, Issue.43
, pp. 6669-6678
-
-
Gurbuxani, S.1
Schmitt, E.2
Cande, C.3
-
31
-
-
17944366977
-
Heat-shock protein 70 antagonizes apoptosis-inducing factor
-
Ravagnan L, Gurbuxani S, Susin S A, et al. Heat-shock protein 70 antagonizes apoptosis-inducing factor. Nature Cell Biology, 2001, 3 (9): 839-843
-
(2001)
Nature Cell Biology
, vol.3
, Issue.9
, pp. 839-843
-
-
Ravagnan, L.1
Gurbuxani, S.2
Susin, S.A.3
-
32
-
-
33746500168
-
GRP78/BiP is required for cell proliferation and protecting the inner cell mass from apoptosis during early mouse embryonic development
-
Luo S, Mao C, Lee B, et al. GRP78/BiP is required for cell proliferation and protecting the inner cell mass from apoptosis during early mouse embryonic development. Mol Cell Biol, 2006, 26(15): 5688-5697
-
(2006)
Mol Cell Biol
, vol.26
, Issue.15
, pp. 5688-5697
-
-
Luo, S.1
Mao, C.2
Lee, B.3
-
33
-
-
8744294747
-
Analysis of proteome and transcriptome of tumor necrosis factor alpha stimulated vascular smooth muscle cells with or without alpha lipoic acid
-
Jang W G, Kim H S, Park K G, et al. Analysis of proteome and transcriptome of tumor necrosis factor alpha stimulated vascular smooth muscle cells with or without alpha lipoic acid. Proteomics, 2004, 4(11): 3383-3393
-
(2004)
Proteomics
, vol.4
, Issue.11
, pp. 3383-3393
-
-
Jang, W.G.1
Kim, H.S.2
Park, K.G.3
|