-
1
-
-
0035834777
-
Characterization of the stability and folding of H2A.Z chromatin particles: Implications for transcriptional activation
-
Abbott, D. W., V. S. Ivanova, X. Wang, W. M. Bonner, and J. Ausió. 2001. Characterization of the stability and folding of H2A.Z chromatin particles: implications for transcriptional activation. J. Biol. Chem. 276:41945-41949.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 41945-41949
-
-
Abbott, D.W.1
Ivanova, V.S.2
Wang, X.3
Bonner, W.M.4
Ausió, J.5
-
2
-
-
34447536953
-
Intrinsic disorder and autonomous domain function in the multifunctional nuclear protein, MeCP2
-
Adams, V. H., S. J. McBryant, P. A. Wade, C. L. Woodcock, and J. C. Hansen. 2007. Intrinsic disorder and autonomous domain function in the multifunctional nuclear protein, MeCP2. J. Biol. Chem. 282:15057-15064.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 15057-15064
-
-
Adams, V.H.1
McBryant, S.J.2
Wade, P.A.3
Woodcock, C.L.4
Hansen, J.C.5
-
3
-
-
0016251993
-
Two cell lines from lymphomas of Marek's disease
-
Akiyama, Y., and S. Kato. 1974. Two cell lines from lymphomas of Marek's disease. Biken J. 17:105-116.
-
(1974)
Biken J
, vol.17
, pp. 105-116
-
-
Akiyama, Y.1
Kato, S.2
-
4
-
-
0032830639
-
Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2
-
Amir, R. E., I. B. Van den Veyver, M. Wan, C. Q. Tran, U. Francke, and H. Y. Zoghbi. 1999. Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2. Nat. Genet. 23:185-188.
-
(1999)
Nat. Genet
, vol.23
, pp. 185-188
-
-
Amir, R.E.1
Van den Veyver, I.B.2
Wan, M.3
Tran, C.Q.4
Francke, U.5
Zoghbi, H.Y.6
-
5
-
-
0032584136
-
Linker histone protects linker DNA on only one side of the core particle and in a sequence-dependent manner
-
An, W., S. H. Leuba, K. van Holde, and J. Zlatanova. 1998. Linker histone protects linker DNA on only one side of the core particle and in a sequence-dependent manner. Proc. Natl. Acad. Sci. USA 95:3396-3401.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 3396-3401
-
-
An, W.1
Leuba, S.H.2
van Holde, K.3
Zlatanova, J.4
-
6
-
-
33750704608
-
Five repair pathways in one context: Chromatin modification during DNA repair
-
Ataian, Y., and J. E. Krebs. 2006. Five repair pathways in one context: chromatin modification during DNA repair. Biochem. Cell Biol. 84:490-504.
-
(2006)
Biochem. Cell Biol
, vol.84
, pp. 490-504
-
-
Ataian, Y.1
Krebs, J.E.2
-
7
-
-
36148973603
-
-
Elsevier, Amsterdam, The Netherlands
-
Ausió, J., and D. W. Abbott. 2004. The role of histone variability in chromatin stability and folding, vol. 39. Elsevier, Amsterdam, The Netherlands.
-
(2004)
The role of histone variability in chromatin stability and folding
, vol.39
-
-
Ausió, J.1
Abbott, D.W.2
-
8
-
-
0024573304
-
Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome
-
Ausió, J., F. Dong, and K. E. van Holde. 1989. Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome. J. Mol. Biol. 206:451-463.
-
(1989)
J. Mol. Biol
, vol.206
, pp. 451-463
-
-
Ausió, J.1
Dong, F.2
van Holde, K.E.3
-
9
-
-
0041630755
-
Syndromes of disordered chromatin remodeling
-
Ausió, J., D. B. Levin, G. V. De Amorim, S. Bakker, and P. M. Macleod. 2003. Syndromes of disordered chromatin remodeling. Clin. Genet. 64:83-95.
-
(2003)
Clin. Genet
, vol.64
, pp. 83-95
-
-
Ausió, J.1
Levin, D.B.2
De Amorim, G.V.3
Bakker, S.4
Macleod, P.M.5
-
10
-
-
0031669634
-
Reconstitution of chromatin complexes from high-performance liquid chromatography-purified histones
-
Ausió, J., and S. C. Moore. 1998. Reconstitution of chromatin complexes from high-performance liquid chromatography-purified histones. Methods (San Diego) 15:333-342.
-
(1998)
Methods (San Diego)
, vol.15
, pp. 333-342
-
-
Ausió, J.1
Moore, S.C.2
-
11
-
-
0022551060
-
Histone hyperacetylation: Its effects on nucleosome conformation and stability
-
Ausió, J., and K. E. van Holde. 1986. Histone hyperacetylation: its effects on nucleosome conformation and stability. Biochemistry 25:1421-1428.
-
(1986)
Biochemistry
, vol.25
, pp. 1421-1428
-
-
Ausió, J.1
van Holde, K.E.2
-
12
-
-
0034543135
-
Most microsatellite unstable sporadic colorectal carcinomas carry MBD4 mutations
-
Bader, S., M. Walker, and D. Harrison. 2000. Most microsatellite unstable sporadic colorectal carcinomas carry MBD4 mutations. Br. J. Cancer 83:1646-1649.
-
(2000)
Br. J. Cancer
, vol.83
, pp. 1646-1649
-
-
Bader, S.1
Walker, M.2
Harrison, D.3
-
13
-
-
0035169663
-
Methyl-CpG-binding proteins. Targeting specific gene repression
-
Ballestar, E., and A. P. Wolffe. 2001. Methyl-CpG-binding proteins. Targeting specific gene repression. Eur. J. Biochem. 268:1-6.
-
(2001)
Eur. J. Biochem
, vol.268
, pp. 1-6
-
-
Ballestar, E.1
Wolffe, A.P.2
-
14
-
-
0028280448
-
Nucleosome structural changes due to acetylation
-
Bauer, W. R., J. J. Hayes, J. H. White, and A. P. Wolffe. 1994. Nucleosome structural changes due to acetylation. J. Mol. Biol. 236:685-690.
-
(1994)
J. Mol. Biol
, vol.236
, pp. 685-690
-
-
Bauer, W.R.1
Hayes, J.J.2
White, J.H.3
Wolffe, A.P.4
-
15
-
-
10044245884
-
Base excision repair in nucleosomes lacking histone tails
-
Beard, B. C., J. J. Stevenson, S. H. Wilson, and M. J. Smerdon. 2005. Base excision repair in nucleosomes lacking histone tails. DNA Repair (Amsterdam) 4:203-209.
-
(2005)
DNA Repair (Amsterdam)
, vol.4
, pp. 203-209
-
-
Beard, B.C.1
Stevenson, J.J.2
Wilson, S.H.3
Smerdon, M.J.4
-
16
-
-
0037934742
-
Suppressed catalytic activity of base excision repair enzymes on rotationally positioned uracil in nucleosomes
-
Beard, B. C., S. H. Wilson, and M. J. Smerdon. 2003. Suppressed catalytic activity of base excision repair enzymes on rotationally positioned uracil in nucleosomes. Proc. Natl. Acad. Sci. USA 100:7465-7470.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 7465-7470
-
-
Beard, B.C.1
Wilson, S.H.2
Smerdon, M.J.3
-
17
-
-
0031979122
-
Correlation between transcription and C to T mutations in the non-transcribed DNA strand
-
Beletskii, A., and A. S. Bhagwat. 1998. Correlation between transcription and C to T mutations in the non-transcribed DNA strand. Biol. Chem. 379:549-551.
-
(1998)
Biol. Chem
, vol.379
, pp. 549-551
-
-
Beletskii, A.1
Bhagwat, A.S.2
-
18
-
-
0033616583
-
MED1, a novel human methyl-CpG-binding endonuclease, interacts with DNA mismatch repair protein MLH1
-
Bellacosa, A., L. Cicchillitti, F. Schepis, A. Riccio, A. T. Yeung, Y. Matsumoto, E. A. Golemis, M. Genuardi, and G. Neri. 1999. MED1, a novel human methyl-CpG-binding endonuclease, interacts with DNA mismatch repair protein MLH1. Proc. Natl. Acad. Sci. USA 96:3969-3974.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3969-3974
-
-
Bellacosa, A.1
Cicchillitti, L.2
Schepis, F.3
Riccio, A.4
Yeung, A.T.5
Matsumoto, Y.6
Golemis, E.A.7
Genuardi, M.8
Neri, G.9
-
19
-
-
0025716294
-
DNA methylation: Evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes
-
Bestor, T. H. 1990. DNA methylation: evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes. Philos. Trans. R. Soc. Lond. B 326:179-187.
-
(1990)
Philos. Trans. R. Soc. Lond. B
, vol.326
, pp. 179-187
-
-
Bestor, T.H.1
-
20
-
-
33847389340
-
DNA methylation immediately adjacent to active histone marking does not silence transcription
-
Brinkman, A. B., S. W. Pennings, G. G. Braliou, L. E. Rietveld, and H. G. Stunnenberg. 2007. DNA methylation immediately adjacent to active histone marking does not silence transcription. Nucleic Acids Res. 35:801-811.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 801-811
-
-
Brinkman, A.B.1
Pennings, S.W.2
Braliou, G.G.3
Rietveld, L.E.4
Stunnenberg, H.G.5
-
21
-
-
33750732646
-
Long-range histone acetylation: Biological significance, structural implications, and mechanisms
-
Calestagne-Morelli, A., and J. Ausio. 2006. Long-range histone acetylation: biological significance, structural implications, and mechanisms. Biochem. Cell Biol. 84:518-527.
-
(2006)
Biochem. Cell Biol
, vol.84
, pp. 518-527
-
-
Calestagne-Morelli, A.1
Ausio, J.2
-
22
-
-
0017698452
-
Nucleosome structure controls rates of excision repair in DNA of human cells
-
Cleaver, J. E. 1977. Nucleosome structure controls rates of excision repair in DNA of human cells. Nature 270:451-453.
-
(1977)
Nature
, vol.270
, pp. 451-453
-
-
Cleaver, J.E.1
-
23
-
-
0034161321
-
NPS@: Network protein sequence analysis
-
Combet, C., C. Blanchet, C. Geourjon, and G. Deleage. 2000. NPS@: network protein sequence analysis. Trends Biochem. Sci. 25:147-150.
-
(2000)
Trends Biochem. Sci
, vol.25
, pp. 147-150
-
-
Combet, C.1
Blanchet, C.2
Geourjon, C.3
Deleage, G.4
-
24
-
-
0032817359
-
Effect of interaction between 5-azacytidine and DNA (cytosine-5) methyltransferase on C-to-G and C-to-T mutations in Escherichia coli
-
Doiron, K. M., J. Lavigne-Nicolas, and C. G. Cupples. 1999. Effect of interaction between 5-azacytidine and DNA (cytosine-5) methyltransferase on C-to-G and C-to-T mutations in Escherichia coli. Mutat. Res. 429:37-44.
-
(1999)
Mutat. Res
, vol.429
, pp. 37-44
-
-
Doiron, K.M.1
Lavigne-Nicolas, J.2
Cupples, C.G.3
-
25
-
-
0025311114
-
DNA and protein determinants of nucleosome positioning on sea urchin 5S rRNA gene sequences in vitro
-
Dong, F., J. C. Hansen, and K. E. van Holde. 1990. DNA and protein determinants of nucleosome positioning on sea urchin 5S rRNA gene sequences in vitro. Proc. Natl. Acad. Sci. USA 87:5724-5728.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 5724-5728
-
-
Dong, F.1
Hansen, J.C.2
van Holde, K.E.3
-
26
-
-
0025344222
-
A sensitive genetic assay for the detection of cytosine deamination: Determination of rate constants and the activation energy
-
Frederico, L. A., T. A. Kunkel, and B. R. Shaw. 1990. A sensitive genetic assay for the detection of cytosine deamination: determination of rate constants and the activation energy. Biochemistry 29:2532-2537.
-
(1990)
Biochemistry
, vol.29
, pp. 2532-2537
-
-
Frederico, L.A.1
Kunkel, T.A.2
Shaw, B.R.3
-
27
-
-
0029046603
-
Modulation of chromatin folding by histone acetylation
-
Garcia-Ramirez, M., C. Rocchini, and J. Ausió. 1995. Modulation of chromatin folding by histone acetylation. J. Biol. Chem. 270:17923-17928.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 17923-17928
-
-
Garcia-Ramirez, M.1
Rocchini, C.2
Ausió, J.3
-
28
-
-
0042357071
-
Chromatin compaction by human MeCP2. Assembly of novel secondary chromatin structures in the absence of DNA methylation
-
Georgel, P. T., R. A. Horowitz-Scherer, N. Adkins, C. L. Woodcock, P. A. Wade, and J. C. Hansen. 2003. Chromatin compaction by human MeCP2. Assembly of novel secondary chromatin structures in the absence of DNA methylation. J. Biol. Chem. 278:32181-32188.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 32181-32188
-
-
Georgel, P.T.1
Horowitz-Scherer, R.A.2
Adkins, N.3
Woodcock, C.L.4
Wade, P.A.5
Hansen, J.C.6
-
29
-
-
0026644714
-
Influence of chromatin folding on transcription initiation and elongation by RNA polymerase III
-
Hansen, J. C., and A. P. Wolffe. 1992. Influence of chromatin folding on transcription initiation and elongation by RNA polymerase III. Biochemistry 31:7977-7988.
-
(1992)
Biochemistry
, vol.31
, pp. 7977-7988
-
-
Hansen, J.C.1
Wolffe, A.P.2
-
30
-
-
0027248504
-
Preferential and asymmetric interaction of linker histones with 5S DNA in the nucleosome
-
Hayes, J. J., and A. P. Wolffe. 1993. Preferential and asymmetric interaction of linker histones with 5S DNA in the nucleosome. Proc. Natl. Acad. Sci. USA 90:6415-6419.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 6415-6419
-
-
Hayes, J.J.1
Wolffe, A.P.2
-
31
-
-
0033575886
-
The thymine glycosylase MBD4 can bind to the product of deamination at methylated CpG sites
-
Hendrich, B., U. Hardeland, H. H. Ng, J. Jiricny, and A. Bird. 1999. The thymine glycosylase MBD4 can bind to the product of deamination at methylated CpG sites. Nature 401:301-304.
-
(1999)
Nature
, vol.401
, pp. 301-304
-
-
Hendrich, B.1
Hardeland, U.2
Ng, H.H.3
Jiricny, J.4
Bird, A.5
-
32
-
-
0026094872
-
The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonuclease
-
Hennecke, F., H. Kolmar, K. Brundl, and H. J. Fritz. 1991. The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonuclease. Nature 353:776-778.
-
(1991)
Nature
, vol.353
, pp. 776-778
-
-
Hennecke, F.1
Kolmar, H.2
Brundl, K.3
Fritz, H.J.4
-
33
-
-
0031952181
-
Nucleosome translational position, not histone acetylation, determines TFIIIA binding to nucleosomal Xenopus laevis 5S rRNA genes
-
Howe, L., and J. Ausió. 1998. Nucleosome translational position, not histone acetylation, determines TFIIIA binding to nucleosomal Xenopus laevis 5S rRNA genes. Mol. Cell. Biol. 18:1156-1162.
-
(1998)
Mol. Cell. Biol
, vol.18
, pp. 1156-1162
-
-
Howe, L.1
Ausió, J.2
-
34
-
-
0032496272
-
Folding of chromatin in the presence of heterogeneous histone H1 binding to nucleosomes
-
Howe, L., M. Iskandar, and J. Ausió. 1998. Folding of chromatin in the presence of heterogeneous histone H1 binding to nucleosomes. J. Biol. Chem. 273:11625-11629.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 11625-11629
-
-
Howe, L.1
Iskandar, M.2
Ausió, J.3
-
35
-
-
33644626974
-
Base excision repair in nucleosome substrates
-
Jagannathan, I., H. A. Cole, and J. J. Hayes. 2006. Base excision repair in nucleosome substrates. Chromosome Res. 14:27-37.
-
(2006)
Chromosome Res
, vol.14
, pp. 27-37
-
-
Jagannathan, I.1
Cole, H.A.2
Hayes, J.J.3
-
36
-
-
32344450824
-
Genomic DNA methylation: The mark and its mediators
-
Klose, R. J., and A. P. Bird. 2006. Genomic DNA methylation: the mark and its mediators. Trends Biochem. Sci. 31:89-97.
-
(2006)
Trends Biochem. Sci
, vol.31
, pp. 89-97
-
-
Klose, R.J.1
Bird, A.P.2
-
37
-
-
18944404300
-
The thymine DNA glycosylase MBD4 represses transcription and is associated with methylated p16(INK4a) and hMLH1 genes
-
Kondo, E., Z. Gu, A. Horii, and S. Fukushige. 2005. The thymine DNA glycosylase MBD4 represses transcription and is associated with methylated p16(INK4a) and hMLH1 genes. Mol. Cell. Biol. 25:4388-4396.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 4388-4396
-
-
Kondo, E.1
Gu, Z.2
Horii, A.3
Fukushige, S.4
-
38
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
39
-
-
14044274310
-
-
Li, A., A. H. Maffey, W. D. Abbott, N. Conde e Silva, A. Prunell, J. Siino, D. Churikov, A. O. Zalensky, and J. Ausio. 2005. Characterization of nucleosomes consisting of the human testis/sperm-specific histone H2B variant (hTSH2B). Biochemistry 44:2529-2535.
-
Li, A., A. H. Maffey, W. D. Abbott, N. Conde e Silva, A. Prunell, J. Siino, D. Churikov, A. O. Zalensky, and J. Ausio. 2005. Characterization of nucleosomes consisting of the human testis/sperm-specific histone H2B variant (hTSH2B). Biochemistry 44:2529-2535.
-
-
-
-
40
-
-
0026708177
-
Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
-
Li, E., T. H. Bestor, and R. Jaenisch. 1992. Targeted mutation of the DNA methyltransferase gene results in embryonic lethality. Cell 69:915-926.
-
(1992)
Cell
, vol.69
, pp. 915-926
-
-
Li, E.1
Bestor, T.H.2
Jaenisch, R.3
-
41
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
Luger, K., A. W. Mader, R. K. Richmond, D. F. Sargent, and T. J. Richmond. 1997. Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 389:251-260.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
42
-
-
33947309924
-
Probasin promoter assembles into a strongly positioned nucleosome that permits androgen receptor binding
-
Maffey, A. H., T. Ishibashi, C. He, X. Wang, A. R. White, S. C. Hendy, C. C. Nelson, P. S. Rennie, and J. Ausio. 2007. Probasin promoter assembles into a strongly positioned nucleosome that permits androgen receptor binding. Mol. Cell. Endocrinol. 268:10-19.
-
(2007)
Mol. Cell. Endocrinol
, vol.268
, pp. 10-19
-
-
Maffey, A.H.1
Ishibashi, T.2
He, C.3
Wang, X.4
White, A.R.5
Hendy, S.C.6
Nelson, C.C.7
Rennie, P.S.8
Ausio, J.9
-
43
-
-
0024342686
-
Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs
-
Meehan, R. R., J. D. Lewis, S. McKay, E. L. Kleiner, and A. P. Bird. 1989. Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs. Cell 58:499-507.
-
(1989)
Cell
, vol.58
, pp. 499-507
-
-
Meehan, R.R.1
Lewis, J.D.2
McKay, S.3
Kleiner, E.L.4
Bird, A.P.5
-
44
-
-
34548239142
-
ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A. Bbd nucleosomes
-
Menoni, H., D. Gasparutto, A. Hamiche, J. Cadet, S. Dimitrov, P. Bouvet, and D. Angelov. 2007. ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A. Bbd nucleosomes. Mol. Cell. Biol. 27:5949-5956.
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 5949-5956
-
-
Menoni, H.1
Gasparutto, D.2
Hamiche, A.3
Cadet, J.4
Dimitrov, S.5
Bouvet, P.6
Angelov, D.7
-
45
-
-
34547850642
-
Different structural states in oligonucleosomes are required for early versus late steps of base excision repair
-
Nakanishi, S., R. Prasad, S. H. Wilson, and M. Smerdon. 2007. Different structural states in oligonucleosomes are required for early versus late steps of base excision repair. Nucleic Acids Res. 35:4313-4321.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 4313-4321
-
-
Nakanishi, S.1
Prasad, R.2
Wilson, S.H.3
Smerdon, M.4
-
46
-
-
15844419144
-
Cloning and expression of human G/T mismatch-specific thymine-DNA glycosylase
-
Neddermann, P., P. Gallinari, T. Lettieri, D. Schmid, O. Truong, J. J. Hsuan, K. Wiebauer, and J. Jiricny. 1996. Cloning and expression of human G/T mismatch-specific thymine-DNA glycosylase. J. Biol. Chem. 271:12767-12774.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 12767-12774
-
-
Neddermann, P.1
Gallinari, P.2
Lettieri, T.3
Schmid, D.4
Truong, O.5
Hsuan, J.J.6
Wiebauer, K.7
Jiricny, J.8
-
47
-
-
33846637375
-
Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin
-
Nikitina, T., X. Shi, R. P. Ghosh, R. A. Horowitz-Scherer, J. C. Hansen, and C. L. Woodcock. 2007. Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin. Mol. Cell. Biol. 27:864-877.
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 864-877
-
-
Nikitina, T.1
Shi, X.2
Ghosh, R.P.3
Horowitz-Scherer, R.A.4
Hansen, J.C.5
Woodcock, C.L.6
-
48
-
-
0036847501
-
DNA base excision repair of uracil residues in reconstituted nucleosome core particles
-
Nilsen, H., T. Lindahl, and A. Verreault. 2002. DNA base excision repair of uracil residues in reconstituted nucleosome core particles. EMBO J. 21:5943-5952.
-
(2002)
EMBO J
, vol.21
, pp. 5943-5952
-
-
Nilsen, H.1
Lindahl, T.2
Verreault, A.3
-
49
-
-
0024503977
-
Histone acetylation reduces nucleosome core particle linking number change
-
Norton, V. G., B. S. Imai, P. Yau, and E. M. Bradbury. 1989. Histone acetylation reduces nucleosome core particle linking number change. Cell 57:449-457.
-
(1989)
Cell
, vol.57
, pp. 449-457
-
-
Norton, V.G.1
Imai, B.S.2
Yau, P.3
Bradbury, E.M.4
-
50
-
-
0035906936
-
Solution structure of the methyl-CpG binding domain of human MBD1 in complex with methylated DNA
-
Ohki, I., N. Shimotake, N. Fujita, J. Jee, T. Ikegami, M. Nakao, and M. Shirakawa. 2001. Solution structure of the methyl-CpG binding domain of human MBD1 in complex with methylated DNA. Cell 105:487-497.
-
(2001)
Cell
, vol.105
, pp. 487-497
-
-
Ohki, I.1
Shimotake, N.2
Fujita, N.3
Jee, J.4
Ikegami, T.5
Nakao, M.6
Shirakawa, M.7
-
51
-
-
0033777253
-
Investigation of the substrate spectrum of the human mismatch-specific DNA N-glycosylase MED1 (MBD4): Fundamental role of the catalytic domain
-
Petronzelli, F., A. Riccio, G. D. Markham, S. H. Seeholzer, M. Genuardi, M. Karbowski, A. T. Yeung, Y. Matsumoto, and A. Bellacosa. 2000. Investigation of the substrate spectrum of the human mismatch-specific DNA N-glycosylase MED1 (MBD4): fundamental role of the catalytic domain. J. Cell. Physiol. 185:473-480.
-
(2000)
J. Cell. Physiol
, vol.185
, pp. 473-480
-
-
Petronzelli, F.1
Riccio, A.2
Markham, G.D.3
Seeholzer, S.H.4
Genuardi, M.5
Karbowski, M.6
Yeung, A.T.7
Matsumoto, Y.8
Bellacosa, A.9
-
52
-
-
0034693039
-
Biphasic kinetics of the human DNA repair protein MED1 (MBD4), a mismatch-specific DNA N-glycosylase
-
Petronzelli, F., A. Riccio, G. D. Markham, S. H. Seeholzer, J. Stoerker, M. Genuardi, A. T. Yeung, Y. Matsumoto, and A. Bellacosa. 2000. Biphasic kinetics of the human DNA repair protein MED1 (MBD4), a mismatch-specific DNA N-glycosylase. J. Biol. Chem. 275:32422-32429.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 32422-32429
-
-
Petronzelli, F.1
Riccio, A.2
Markham, G.D.3
Seeholzer, S.H.4
Stoerker, J.5
Genuardi, M.6
Yeung, A.T.7
Matsumoto, Y.8
Bellacosa, A.9
-
53
-
-
29644436410
-
Mutagenesis at methylated CpG sequences
-
Pfeifer, G. P. 2006. Mutagenesis at methylated CpG sequences. Curr. Top. Microbiol. Immunol. 301:259-281.
-
(2006)
Curr. Top. Microbiol. Immunol
, vol.301
, pp. 259-281
-
-
Pfeifer, G.P.1
-
54
-
-
2342590569
-
Mechanism of 2-aminopurine-stimulated mutagenesis in Escherichia coli
-
Pitsikas, P., J. M. Patapas, and C. G. Cupples. 2004. Mechanism of 2-aminopurine-stimulated mutagenesis in Escherichia coli. Mutat. Res. 550:25-32.
-
(2004)
Mutat. Res
, vol.550
, pp. 25-32
-
-
Pitsikas, P.1
Patapas, J.M.2
Cupples, C.G.3
-
55
-
-
21844475908
-
Nucleotide excision repair in chromatin: The shape of things to come
-
Reed, S. H. 2005. Nucleotide excision repair in chromatin: the shape of things to come. DNA Repair (Amsterdam) 4:909-918.
-
(2005)
DNA Repair (Amsterdam)
, vol.4
, pp. 909-918
-
-
Reed, S.H.1
-
56
-
-
9144246375
-
Comparative study of methyl-CpG-binding domain proteins
-
Roloff, T. C., H. H. Ropers, and U. A. Nuber. 2003. Comparative study of methyl-CpG-binding domain proteins. BMC Genomics 4:1.
-
(2003)
BMC Genomics
, vol.4
, pp. 1
-
-
Roloff, T.C.1
Ropers, H.H.2
Nuber, U.A.3
-
57
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
Schwede, T., J. Kopp, N. Guex, and M. C. Peitsch. 2003. SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res. 31:3381-3385.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
58
-
-
0022234831
-
Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: A model system for study of higher order structure
-
Simpson, R. T., F. Thoma, and J. M. Brubaker. 1985. Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure. Cell 42:799-808.
-
(1985)
Cell
, vol.42
, pp. 799-808
-
-
Simpson, R.T.1
Thoma, F.2
Brubaker, J.M.3
-
60
-
-
28844474197
-
Accommodation and repair of a UV photoproduct in DNA at different rotational settings on the nucleosome surface
-
Svedruzic, Z. M., C. Wang, J. V. Kosmoski, and M. J. Smerdon. 2005. Accommodation and repair of a UV photoproduct in DNA at different rotational settings on the nucleosome surface. J. Biol. Chem. 280:40051-40057.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 40051-40057
-
-
Svedruzic, Z.M.1
Wang, C.2
Kosmoski, J.V.3
Smerdon, M.J.4
-
61
-
-
0017762802
-
Reconstitution of chromatin core particles
-
Tatchell, K., and K. E. Van Holde. 1977. Reconstitution of chromatin core particles. Biochemistry 16:5295-5303.
-
(1977)
Biochemistry
, vol.16
, pp. 5295-5303
-
-
Tatchell, K.1
Van Holde, K.E.2
-
62
-
-
33746015346
-
H2A. Z stabilizes chromatin in a way that is dependent on core histone acetylation
-
Thambirajah, A. A., D. Dryhurst, T. Ishibashi, A. Li, A. H. Maffey, and J. Ausio. 2006. H2A. Z stabilizes chromatin in a way that is dependent on core histone acetylation. J. Biol. Chem. 281:20036-20044.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 20036-20044
-
-
Thambirajah, A.A.1
Dryhurst, D.2
Ishibashi, T.3
Li, A.4
Maffey, A.H.5
Ausio, J.6
-
63
-
-
0036184090
-
Association of CBP/p300 acerylase and thymine DNA glycosylase links DNA repair and transcription
-
Tini, M., A. Benecke, S. J. Um, J. Torchia, R. M. Evans, and P. Chambon. 2002. Association of CBP/p300 acerylase and thymine DNA glycosylase links DNA repair and transcription. Mol. Cell 9:265-277.
-
(2002)
Mol. Cell
, vol.9
, pp. 265-277
-
-
Tini, M.1
Benecke, A.2
Um, S.J.3
Torchia, J.4
Evans, R.M.5
Chambon, P.6
-
64
-
-
0031876314
-
Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III
-
Tse, C., T. Sera, A. P. Wolffe, and J. C. Hansen. 1998. Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III. Mol. Cell. Biol. 18:4629-4638.
-
(1998)
Mol. Cell. Biol
, vol.18
, pp. 4629-4638
-
-
Tse, C.1
Sera, T.2
Wolffe, A.P.3
Hansen, J.C.4
-
65
-
-
33747890207
-
The DNA N-glycosylase MEDl exhibits preference for halogenated pyrimidines and is involved in the cytotoxicity of 5-iododeoxyuridine
-
Turner, D. P., S. Cortellino, J. E. Schupp, E. Caretti, T. Loh, T. J. Kinsella, and A. Bellacosa. 2006. The DNA N-glycosylase MEDl exhibits preference for halogenated pyrimidines and is involved in the cytotoxicity of 5-iododeoxyuridine. Cancer Res. 66:7686-7693.
-
(2006)
Cancer Res
, vol.66
, pp. 7686-7693
-
-
Turner, D.P.1
Cortellino, S.2
Schupp, J.E.3
Caretti, E.4
Loh, T.5
Kinsella, T.J.6
Bellacosa, A.7
-
66
-
-
20044370689
-
5-Halogenated pyrimidine lesions within a CpG sequence context mimic 5-methylcytosine by enhancing the binding of the methyl-CpG-binding domain of methyl-CpG-binding protein 2 (MeCP2)
-
Valinluck, V., P. Liu, J. I. Kang, Jr., A. Burdzy, and L. C. Sowers. 2005. 5-Halogenated pyrimidine lesions within a CpG sequence context mimic 5-methylcytosine by enhancing the binding of the methyl-CpG-binding domain of methyl-CpG-binding protein 2 (MeCP2). Nucleic Acids Res. 33:3057-3064.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 3057-3064
-
-
Valinluck, V.1
Liu, P.2
Kang Jr., J.I.3
Burdzy, A.4
Sowers, L.C.5
-
68
-
-
0038661177
-
Nucleotide excision repair from site-specifically platinum-modified nucleosomes
-
Wang, D., R. Hara, G. Singh, A. Sancar, and S. J. Lippard. 2003. Nucleotide excision repair from site-specifically platinum-modified nucleosomes. Biochemistry 42:6747-6753.
-
(2003)
Biochemistry
, vol.42
, pp. 6747-6753
-
-
Wang, D.1
Hara, R.2
Singh, G.3
Sancar, A.4
Lippard, S.J.5
-
69
-
-
0034634558
-
Acetylation increases the alpha-helical content of the histone tails of the nucleosome
-
Wang, X., S. C. Moore, M. Laszckzak, and J. Ausió. 2000. Acetylation increases the alpha-helical content of the histone tails of the nucleosome. J. Biol. Chem. 275:35013-35020.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 35013-35020
-
-
Wang, X.1
Moore, S.C.2
Laszckzak, M.3
Ausió, J.4
-
70
-
-
0015959271
-
Preferential DNA repair in human cells
-
Wilkins, R. J., and R. W. Hart. 1974. Preferential DNA repair in human cells. Nature 247:35-36.
-
(1974)
Nature
, vol.247
, pp. 35-36
-
-
Wilkins, R.J.1
Hart, R.W.2
-
71
-
-
0038475941
-
Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4
-
Wu, P., C. Qiu, A. Sohail, X. Zhang, A. S. Bhagwat, and X. Cheng. 2003. Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4. J. Biol. Chem. 278:5285-5291.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 5285-5291
-
-
Wu, P.1
Qiu, C.2
Sohail, A.3
Zhang, X.4
Bhagwat, A.S.5
Cheng, X.6
-
72
-
-
0021352605
-
Dynamics and equilibria of nucleosomes at elevated ionic strength
-
Yager, T. D., and K. E. van Holde. 1984. Dynamics and equilibria of nucleosomes at elevated ionic strength. J. Biol. Chem. 259:4212-4222.
-
(1984)
J. Biol. Chem
, vol.259
, pp. 4212-4222
-
-
Yager, T.D.1
van Holde, K.E.2
-
73
-
-
38049110204
-
Structure and mechanism for DNA lesion recognition
-
Yang, W. 2008. Structure and mechanism for DNA lesion recognition. Cell Res. 18:184-197.
-
(2008)
Cell Res
, vol.18
, pp. 184-197
-
-
Yang, W.1
|