-
1
-
-
27544440058
-
Shifting and scaling patterns from gene expression data
-
J. Aguilar-Ruiz. Shifting and scaling patterns from gene expression data. Bioinformatics, 21(20):3849-3845, 2005.
-
(2005)
Bioinformatics
, vol.21
, Issue.20
, pp. 3849-3845
-
-
Aguilar-Ruiz, J.1
-
2
-
-
33644541423
-
Evolutionary computation for biclustering of gene expression
-
New York, NY, USA, ACM Press
-
J. S. Aguilar-Ruiz and F. Divina. Evolutionary computation for biclustering of gene expression. In SAC '05: Proc. of the 2005 ACM symposium on Applied computing, pages 959-960, New York, NY, USA, 2005. ACM Press.
-
(2005)
SAC '05: Proc. of the 2005 ACM symposium on Applied computing
, pp. 959-960
-
-
Aguilar-Ruiz, J.S.1
Divina, F.2
-
3
-
-
0034598746
-
-
A. A. Alizadeh, M. B. Eisen, R. E. Davis, C. Ma, I. S. Lossos, A. Rosenwald, J. C. Boldrick, H. Sabet, T. Tran, X. Yu, J. I. Powell, Liming, G. E. Marti, T. Moore, J. Hudson, Jr, L. Lu0, D. B. Lewis0, R. Tibshirani, G. Sherlock, W. C. Chan, T. C. Greiner, D. D. Weisenburger, J. O. Armitage, R. Warnke, R. Levy, W. Wilson, M. R. Grever, J. C. Byrd, D. Botstein, P. O. Brown, and L. M. Staudt. Distinct types of diffuse large b-cell lymphoma identified by gene expression profiling. Nat., 403:503-511, 2000.
-
A. A. Alizadeh, M. B. Eisen, R. E. Davis, C. Ma, I. S. Lossos, A. Rosenwald, J. C. Boldrick, H. Sabet, T. Tran, X. Yu, J. I. Powell, Liming, G. E. Marti, T. Moore, J. Hudson, Jr, L. Lu0, D. B. Lewis0, R. Tibshirani, G. Sherlock, W. C. Chan, T. C. Greiner, D. D. Weisenburger, J. O. Armitage, R. Warnke, R. Levy, W. Wilson, M. R. Grever, J. C. Byrd, D. Botstein, P. O. Brown,, and L. M. Staudt. Distinct types of diffuse large b-cell lymphoma identified by gene expression profiling. Nat., 403:503-511, 2000.
-
-
-
-
4
-
-
0142026003
-
-
M. Brown, W. Grundy, D. Lin, N. Cristianini, C. Sugnet, T. Furey, M. Ares, and D. Haussler. Knowledge-based analysis of microarray gene expression data by using support vector machines. 2000.
-
(2000)
Knowledge-based analysis of microarray gene expression data by using support vector machines
-
-
Brown, M.1
Grundy, W.2
Lin, D.3
Cristianini, N.4
Sugnet, C.5
Furey, T.6
Ares, M.7
Haussler, D.8
-
9
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
M. B. Eisen, P. T. Spellman, P. O. Brown, and D. Botstein. Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA, 8(95):14863-8, 1998
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.8
, Issue.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
10
-
-
0033636139
-
Support vector machine classification and validation of cancer tissue sample using microarray expression data
-
T. S. Furey, N. Cristianini, N. Duffy, D. W. Bennarski, M. Schummer, and D. Haussler. Support vector machine classification and validation of cancer tissue sample using microarray expression data. Bioinformatics 16(10):906-914, 2000.
-
(2000)
Bioinformatics
, vol.16
, Issue.10
, pp. 906-914
-
-
Furey, T.S.1
Cristianini, N.2
Duffy, N.3
Bennarski, D.W.4
Schummer, M.5
Haussler, D.6
-
11
-
-
0037057374
-
Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering
-
A. Gasch and M. Eisen. Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering. Geneome biology, 3(11):1-22 2002.
-
(2002)
Geneome biology
, vol.3
, Issue.11
, pp. 1-22
-
-
Gasch, A.1
Eisen, M.2
-
12
-
-
0033637153
-
Genomic expression program in the response of yeast cells to environmental changes
-
A. Gasch, P. Spellman, C. Kao, O. Carmel-Harel, M. Eisen, G. Storz, D. Botstein, and P. Brown. Genomic expression program in the response of yeast cells to environmental changes. Mol. Bio. Cell, 11:4241-4257, 2000.
-
(2000)
Mol. Bio. Cell
, vol.11
, pp. 4241-4257
-
-
Gasch, A.1
Spellman, P.2
Kao, C.3
Carmel-Harel, O.4
Eisen, M.5
Storz, G.6
Botstein, D.7
Brown, P.8
-
13
-
-
25444456388
-
Towards precise classification of cancers based on robust gene functional expression profiles
-
Z. Guo, T. Zhang, X. Li, Q. Wang, J. Xu, H. Yu, J. Zhu, H. Wang, C. Wang, E. J. Topol, Q. Wang, , and S. Rao. Towards precise classification of cancers based on robust gene functional expression profiles. BMC Bioinformatics., 6(584): 1-12, 2005.
-
(2005)
BMC Bioinformatics
, vol.6
, Issue.584
, pp. 1-12
-
-
Guo, Z.1
Zhang, T.2
Li, X.3
Wang, Q.4
Xu, J.5
Yu, H.6
Zhu, J.7
Wang, H.8
Wang, C.9
Topol, E.J.10
Wang, Q.11
Rao, S.12
-
14
-
-
0034616930
-
Functional discovery via a compendium of expression profiles
-
July
-
T. R. Hughes, M. J. Marton, A. R. Jones, C. J. Roberts, R. Stoughton, C. D. Armour, H. A. Bennett, E. Coffey, H. Dai, Y. D. He, M. J. Kidd, A. M. King, M. R. Meyer D. Slade, P. Y. Lum, S. B. Stepaniants, D. D. Shoemaker, D. Gachotte, K. Chakraburtty, J. Simon, M. Bard, and S. H. Friend. Functional discovery via a compendium of expression profiles. Cell, 102:109-126, July 2000.
-
(2000)
Cell
, vol.102
, pp. 109-126
-
-
Hughes, T.R.1
Marton, M.J.2
Jones, A.R.3
Roberts, C.J.4
Stoughton, R.5
Armour, C.D.6
Bennett, H.A.7
Coffey, E.8
Dai, H.9
He, Y.D.10
Kidd, M.J.11
King, A.M.12
Meyer, M.R.13
Slade, D.14
Lum, P.Y.15
Stepaniants, S.B.16
Shoemaker, D.D.17
Gachotte, D.18
Chakraburtty, K.19
Simon, J.20
Bard, M.21
Friend, S.H.22
more..
-
15
-
-
13844276694
-
Cluster analysis for gene expression data: A survey
-
D. Jiang, C. Tang, and A. Zhang. Cluster analysis for gene expression data: a survey. Knowledge and Data Engineering, IEEE Trans. on, 16(11):1370-1386, 2004.
-
(2004)
Knowledge and Data Engineering, IEEE Trans. on
, vol.16
, Issue.11
, pp. 1370-1386
-
-
Jiang, D.1
Tang, C.2
Zhang, A.3
-
16
-
-
0037399130
-
Spectral biclustering of microarraydata: Coclustering genes and conditions
-
Y. Kluger, R. Basri, J. T. Chang, and M. Gerstein. Spectral biclustering of microarraydata: Coclustering genes and conditions. Genome Res., 13:703-716, 2003.
-
(2003)
Genome Res
, vol.13
, pp. 703-716
-
-
Kluger, Y.1
Basri, R.2
Chang, J.T.3
Gerstein, M.4
-
17
-
-
47649102181
-
Systematic gene function prediction from gene expression data by using a fuzzy nearest-cluster method
-
X. Li, Y. Tan, and S. Ng. Systematic gene function prediction from gene expression data by using a fuzzy nearest-cluster method. BMC Bioinformatics., 2007.
-
(2007)
BMC Bioinformatics
-
-
Li, X.1
Tan, Y.2
Ng, S.3
-
18
-
-
0036081347
-
Mips: A database for genomes and protein sequences
-
H.-W. Mewes, D. Frishman, U. Güldener, G. Mannhaupt, K. F. X. Mayer, M. Mokrejs, B. Morgenstern, M. Münsterkötter, S. Rudd, and B. Weil. Mips: a database for genomes and protein sequences. Nucleic Acids Research, 30(1):31-34, 2002.
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.1
, pp. 31-34
-
-
Mewes, H.-W.1
Frishman, D.2
Güldener, U.3
Mannhaupt, G.4
Mayer, K.F.X.5
Mokrejs, M.6
Morgenstern, B.7
Münsterkötter, M.8
Rudd, S.9
Weil, B.10
-
19
-
-
0041965980
-
Cluster ensembles - a knowledge reuse framework for combining multiple partitions
-
A. Strehl and J. Ghosh. Cluster ensembles - a knowledge reuse framework for combining multiple partitions. Journal of Machine Learning Research, 3:583-617, 2002.
-
(2002)
Journal of Machine Learning Research
, vol.3
, pp. 583-617
-
-
Strehl, A.1
Ghosh, J.2
-
20
-
-
11244306358
-
Discovering statistically significant biclusters in gene expression data
-
A. Tanay, R. Sharan, and R. Shamir. Discovering statistically significant biclusters in gene expression data. Bioinformatics., 18:36-44, 2002.
-
(2002)
Bioinformatics
, vol.18
, pp. 36-44
-
-
Tanay, A.1
Sharan, R.2
Shamir, R.3
-
21
-
-
0036141951
-
Finding genes in the c2c12 osteogenic pathway by k-nn classification of expression data
-
J. Theilhaber, T. Connolly, S. Roman-Roman, S. Bushnell, A. Jackson, K. Call, T. Garcia, and R. Baron. Finding genes in the c2c12 osteogenic pathway by k-nn classification of expression data. Genome Res., 12:165-176, 2002.
-
(2002)
Genome Res
, vol.12
, pp. 165-176
-
-
Theilhaber, J.1
Connolly, T.2
Roman-Roman, S.3
Bushnell, S.4
Jackson, A.5
Call, K.6
Garcia, T.7
Baron, R.8
-
22
-
-
47649110965
-
-
J. Welsh, L. Sapinoso, A Su, S. Kern, J. Wang-Rodriguez, C. Moskaluk, H. Frierson and G. Hampton. Analysis of Gene Expression Identifies Candidate Markers and Pharmacological Targets in Prostate Cancer, 2001.
-
(2001)
Analysis of Gene Expression Identifies Candidate Markers and Pharmacological Targets in Prostate Cancer
-
-
Welsh, J.1
Sapinoso, L.2
Su, A.3
Kern, S.4
Wang-Rodriguez, J.5
Moskaluk, C.6
Frierson, H.7
Hampton, G.8
-
23
-
-
0036649020
-
Large-scale prediction of Saccharomyces cerevisiace gene function using overlapping transcriptional clusters
-
L. Wu, T. Hughes, A. Davierwala, M. Robinson, R. Stoughton, and S. Altschuler. Large-scale prediction of Saccharomyces cerevisiace gene function using overlapping transcriptional clusters. Nat. Genetics, 31(3):255-265, 2002.
-
(2002)
Nat. Genetics
, vol.31
, Issue.3
, pp. 255-265
-
-
Wu, L.1
Hughes, T.2
Davierwala, A.3
Robinson, M.4
Stoughton, R.5
Altschuler, S.6
|