Enzymatic cleavage of nucleic acids on gold nanoparticles: A generic platform for facile colorimetric biosensors

Small

Volumn 4, Issue 6, 2008, Pages 810-816

  Zhao, Weian ^a   Lam, Jeffrey C F ^b   Chiuman, William ^b   Brook, Michael A ^a   Li, Yingfu ^a,b  

^a MCMASTER UNIVERSITY   (Canada)

^b MCMASTER UNIVERSITY   (Canada)

Author keywords

Biosensors; Colloid stability; DNAzyme; Enzymatic cleavage; Gold

Indexed keywords

ACIDS; AGGLOMERATION; BIOSENSORS; COLOR; COLORIMETRY; DETECTORS; DNA; GENES; GOLD; LEAD; NANOPARTICLES; NANOSTRUCTURED MATERIALS; NANOSTRUCTURES; OPTICAL PROPERTIES; ORGANIC ACIDS; RNA; VAN DER WAALS FORCES;

COLOR CHANGING; COLORIMETRIC BIOSENSORS; DNA CHAINS; ENDONUCLEASE; ENZYMATIC CLEAVAGE; GOLD NANOPARTICLES (NANO-AU); SALT CONCENTRATIONS; STERIC STABILIZATION; VAN DER WAALS ATTRACTION;

NUCLEIC ACIDS;

DEOXYRIBONUCLEASE I; GOLD; METAL NANOPARTICLE; NUCLEIC ACID;

ARTICLE; CHEMISTRY; COLORIMETRY; GENETIC PROCEDURES; METABOLISM;

BIOSENSING TECHNIQUES; COLORIMETRY; DEOXYRIBONUCLEASE I; GOLD; METAL NANOPARTICLES; NUCLEIC ACIDS;

EID: 47549101284     PISSN: 16136810     EISSN: 16136829     Source Type: Journal    
DOI: 10.1002/smll.200700757     Document Type: Article

References (65)

1. a) N. L. Rosi, C. A. Mirkin, Chem. Rev. 2005, 105, 1547;
2. b) E. Katz, I. Willner, Angew. Chem. 2004, 116, 6166;
3. Angew. Chem. Int. Ed. 2004, 43, 6042;
4. c) Y. Lu, J. Liu, Curr. Opin. Biotechnol. 2006, 17, 580;
5. d) R. Baron, B. Willner, I. Willner, Chem. Commun. 2007, 323.
6. a) R. Elghanian, J. J. Storhoff, R. C. Mucic, R. L. Letsinger, C. A. Mirkin, Science 1997, 277, 1078;
7. b) M. K. Beissenhirtz, R. Elnathan, Y. Weizmann, I. Willner, Small 2007, 3, 375;
8. c) M. Zayats, R. Baron, I. Popov, I. Willner, Nano Lett. 2005, 5, 21;
9. d) C. Sonnichsen, B. M. Reinhard, J. Liphardt, A. P. Alivisatos, Nat. Biotechnol. 2005, 23, 741;
10. e) J. Liu, Y. Lu, Angew. Chem. 2005, 118, 96;
11. Angew. Chem. Int. Ed. 2005, 16, 90;
12. f) W. J. Parak, T. Pellegrino, C. M. Micheel, D. Gerlon, S. C. Williams, A. P. Alivisatos, Nano Lett. 2003, 3, 33;
13. g) K. Akamatsu, M. Kimura, Y. Shibata, S. Nakano, D. Miyoshi, H. Nawafune, N. Sugimoto, Nano Lett. 2006, 6, 491.
14. a) J. Zheng, P. E. Constantinou, C. Micheel, A. P. Alivisatos, R. A. Kiehl, N. C. Seeman, Nano Lett 2006, 6, 1502;
15. b) F. A. Aldaye, H. F. Slelman, J. Am. Chem. Soc. 2007, 129, 4130;
16. c) F. A. Aldaye, H. F. Sleiman, Angew. Chem. 2006, 218, 2262;
17. Angew. Chem. Int. Ed. 2006, 45, 2204;
18. d) Z. Deng, Y. Tian, S. H. Lee, A. E. Ribbe, C. Mao, Angew. Chem. 2005, 2 27, 3648;
19. Angew. Chem. Int. Ed. 2005, 44, 3582;
20. e) C. Lin, Y. Liu, H. Yan, Wono. Lett. 2007, 7, 507;
21. f) S. Beyer, P. Nickels, F. C. Slmmel, Wono. Lett. 2005, 5, 719;
22. g) B. Kannan, R. P. Kulkarni, A. Majumdar, Wono Lett. 2004, 4, 1521.
23. N. C. Seeman, Trends. Biotechnol. 1999, 27, 437.
24. a) A. G. Kanaras, Z. Wang, A. D. Bates, R. Cosstick, M. Brust, Angew. Chem. 2003, 2 25, 201;
25. Angew. Chem. Int. Ed. 2003, 42,191;
26. b) A. G. Kanaras, Z. Wang, M. Brust, R. Cosstick, A. D. Bates, Small 2007, 3, 590;
27. c) A. G. Kanaras, Z. Wang, I. Hussain, M. Brust, R. Cosstick, A. D. Bates, Small 2007, 3, 67;
28. d) S. R. Nicewamer Pena, S. Raina, G. P. Goodrich, N. V. Fedoroff, C. D. Keating, J. Am. Chem. Soc. 2002, 224, 7314;
29. e) W. Zhao, Y. Gao, S. A. Kandadai, M. A. Brook, Y. Li, Angew. Chem. 2006, 2 28, 2469;
30. Angew. Chem. Int. Ed. 2006, 45, 2409;
31. f) C. S. Yun, G. A. Khitrov, D. E. Vergona, N. O. Reich, G. F. Strouse, J. Am. Chem. Soc. 2002, 224, 7644;
32. g) W. J. Qin, L. Y. L. Yung, Langmuir 2005, 22, 11330.
33. a) J. Liu, Y. Lu, J. Am. Chem. Soc. 2005, 127, 12677;
34. b) J. Liu, Y. Lu, Org. Biomol. Chem. 2006, 4, 3435.
35. X. Xu, M. S. Han, C. A. Mirkin, Angew. Chem. 2007, 2 29, 3538;
36. Angew. Chem. Int. Ed. 2007, 46, 3468.
37. a) B. M. Reinhard, S. Sheikholeslami, A. Mastroianni, A. P. Alivisatos, J. Liphardt, Proc. Natl. Acad. Sci. USA 2007, 104, 2667;
38. b) Y. Weizmann, R. Elnathan, O. Lioubashevski, I. Willner, J. Am. Chem. Soc. 2005, 127, 12666;
39. c) Z. Wang, R. Levy, D. G. Fernig, M. Brust, J. Am. Chem. Soc. 2006, 128, 2214.
40. a) W. Zhao, W. Chiuman, M. A. Brook, Y. Li, ChemBioChem 2007, 8, 727;
41. b) W. Zhao, W. Chiuman, J. C. F. Lam, M. A. Brook, Y. Li, Chem. Commun. 2007, 3729;
42. c) H. Li, L. Rothberg, Proc. Natl. Acad. Sci. USA 2004, 101, 14036;
43. d) K. Sato, K. Hosokawa, M. Maeda, J. Am. Chem. Soc. 2003, 125, 8102;
44. e) L. Wang, X. Liu, X. Hu, S. Song, Chem. Commun. 2006, 2, 3780.
45. D. H. Napper, Polymeric Stabilization of Colloidal Dispersions, Academic Press, New York 1983.
46. a) E. S. Rangarajan, V. Shankar, FEMS Microbiol. Rev. 2001, 25, 583;
47. b) L. A. Mitscher, Chem. Rev. 2005, 105, 559;
48. c) P. A. Johnston, Drug Discovery Today 2002, 7, 353.
49. a) H. D. Hill, C. A. Mirkin, Nat Protoc. 2006, 1, 324;
50. b) J. Liu, Y. Lu, Nat Protoc. 2006, 2, 246.
51. S. Park, K. A. Brown, K. Hamad-Schifferli, Nano Lett. 2004, 4, 1925.
52. Control experiment showed DNase I itself, under investigated conditions, has no effect (stabilization or destabilization) on AuNPs.
53. R. A. Ikeda, P. B. Dervan, J. Am. Chem. Soc. 1982, 104, 296.
54. a) J. Li, Y. Lu, J. Am. Chem. Soc. 2000, 122, 10466;
55. b) S. W. Santoro, G. F. Joyce, Proc. Natl. Acad. Sci. U. S. A. 1997, 94, 4262.
56. a) J. Liu, Y. Lu, J. Am. Chem. Soc. 2003, 125, 6642;
57. b) J. Liu, Y. Lu, Chem. Mater. 2004, 16, 3231;
58. c) J. Liu, Y. Lu, J. Am. Chem. Soc. 2004, 126, 12298.
59. a) J. Liu, Y. Lu, J. Am. Chem. Soc. 2002, 124, 15208;
60. b) A. K. Brown, J. Li, C. M. B. Pavot, Y. Lu, Biochemistry 2003, 42, 7152.
61. L. Liu, Y. Lu, Anal. Chem. 2004, 76, 1627.
62. a) C. Guarise, L. Pasquato, V. D. Filippis, P. Scrimin, Proc. Natl. Acad. Sci. USA 2006, 103, 3978;
63. b) Y. Choi, N. Ho, C. Tung, Angew. Chem. 2007, 119, 721;
64. Angew. Chem. Int. Ed. 2007, 46, 707;
65. c) R. Levy, N. T. Thanh, R. C. Doty, I. Hussain, R. J. Nichols, D. J. Schiffrin, M. Brust, D. J. Fernig, J. Am. Chem. Soc. 2004, 126, 10076.