Periodic DNA nanotemplates synthesized by rolling circle amplification

Nano Letters

Volumn 5, Issue 4, 2005, Pages 719-722

  Beyer, Stefan ^a   Nickels, Patrick ^a   Simmel, Friedrich C ^a  

^a UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AGGLOMERATION; AMPLIFICATION; ATOMIC FORCE MICROSCOPY; BIOMEDICAL ENGINEERING; ELECTROPHORESIS; LITHOGRAPHY; MOLECULAR WEIGHT; POLYMERIZATION; PROTEINS; RNA; SELF ASSEMBLY; SYNTHESIS (CHEMICAL); WAVEGUIDES;

ANTIBIOTIN ANTIBODY; GEL ELECTROPHORESIS; HEAT INACTIVATION; ROLLING CIRCLE AMPLIFICATION (RCA);

DNA;

BIOTIN; CIRCULAR DNA; DNA DIRECTED DNA POLYMERASE; NANOMATERIAL; OLIGODEOXYRIBONUCLEOTIDE; SINGLE STRANDED DNA; STREPTAVIDIN;

ARTICLE; BIOSYNTHESIS; BIOTINYLATION; CHEMISTRY; DNA REPLICATION; DNA TEMPLATE; NUCLEIC ACID HYBRIDIZATION;

BIOTIN; BIOTINYLATION; DNA REPLICATION; DNA, CIRCULAR; DNA, SINGLE-STRANDED; DNA-DIRECTED DNA POLYMERASE; NANOSTRUCTURES; NUCLEIC ACID HYBRIDIZATION; OLIGODEOXYRIBONUCLEOTIDES; STREPTAVIDIN; TEMPLATES, GENETIC;

EID: 18144409478     PISSN: 15306984     EISSN: None     Source Type: Journal    
DOI: 10.1021/nl050155a     Document Type: Article

References (38)

1. Chen, J. H.; Seeman, N. C. Nature 1991, 350(6319), 631-633.
2. Zhang, Y. W.; Seeman, N. C. J. Am. Chem. Soc. 1994, 116(5), 1661-1669.
3. Mao, C. D.; Sun, W. Q.; Seeman, N. C. Nature 1997, 385(6621), 137-138.
4. Shih, W. M.; Quispe, J. D.; Joyce, G. F. Nature 2004, 427(6975), 618-621.
5. Winfree, E.; Liu, F. R.; Wenzler, L. A.; Seeman, N. C. Nature 1998, 394(6693), 539-544.
6. Feng, L. P.; Park, S. H.; Reif, J. H.; Yan, H. Angew. Chem., Int. Ed. 2003, 42(36), 4342-4346.
7. Yan, H.; LaBean, T. H.; Feng, L. P.; Reif, J. H. Proc. Natl. Acad. Sci. U.S.A. 2003, 100(14), 8103-8108.
8. Liu, D.; Wang, M. S.; Deng, Z. X.; Walulu, R.; Mao, C. D. J. Am. Chem. Soc. 2004, 126(8), 2324-2325.
9. Xiao, S. J.; Liu, F. R.; Rosen, A. E.; Hainfeld, J. F.; Seeman, N. C.; Musier-Forsyth, K.; Kiehl, R. A. J. Nanopart. Res. 2002, 4(4), 313-317.
10. Yan, H.; Park, S. H.; Finkelstein, G.; Reif, J. H.; LaBean, T. H. Science 2003, 301(5641), 1882-1884.
11. Alivisatos, A. P.; Johnsson, K. P.; Peng, X. G.; Wilson, T. E.; Loweth, C. J.; Bruchez, M. P.; Schultz, P. G. Nature 1996, 382(6592), 609-611.
12. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Storhoff, J. J. Nature 1996, 382(6592), 607-609.
13. Mucic, R. C.; Storhoff, J. J.; Mirkin, C. A.; Letsinger, R. L. J. Am. Chem. Soc. 1998, 120(48), 12674-12675.
14. Loweth, C. J.; Caldwell, W. B.; Peng, X. G.; Alivisatos, A. P.; Schultz, P. G. Angew. Chem., Int. Ed. 1999, 38(12), 1808-1812.
15. Mitchell, G. P.; Mirkin, C. A.; Letsinger, R. L. J. Am. Chem. Soc. 1999, 121(35), 8122-8123.
16. Niemeyer, C. M.; Adler, M.; Gao, S.; Chi, L. F. Angew. Chem., Int. Ed. 2000, 39(17), 3055-3059.
17. Weizmann, Y.; Patolsky, F.; Popov, I.; Willner, I. Nano Lett. 2004, 4(5), 787-792.
18. Patolsky, F.; Weizmann, Y.; Lioubashevski, O.; Willner, I. Angew. Chem., Int. Ed. 2002, 41(13), 2323-2327.
19. Braun, E.; Eichen, Y.; Sivan, U.; Ben-Yoseph, G. Nature 1998, 391(6669), 775-778.
20. Richter, J.; Seidel, R.; Kirsch, R.; Mertig, M.; Pompe, W.; Plaschke, J.; Schackert, H. K. Adv. Mater. 2000, 12(7), 507.
21. Richter, J.; Mertig, M.; Pompe, W.; Monch, I.; Schackert, H. K. Appl. Phys. Lett. 2001, 78(4), 536-538.
22. Nickels, P.; Dittmer, W. U.; Beyer, S.; Kotthaus, J. P.; Simmel, F. C. Nanotechnol. 2004, 15, 1524-1529.
23. Keren, K.; Krueger, M.; Gilad, R.; Ben-Yoseph, G.; Sivan, U.; Braun, E. Science 2002, 297(5578), 72-75.
24. Keren, K.; Berman, R. S.; Buchstab, E.; Sivan, U.; Braun, E. Science 2003, 302(5649), 1380-1382.
25. Rudert, W. A.; Trucco, M., Multimers of specific DNA sequences generated by PCR, In Genetic Engineering with PCR; Horton, R. M., Tait, R. C., Eds.; Horizon Scientific Press: Wymondham, 1998; pp. 83-95.
26. A related approach based on the enzyme telomerase has been taken by Weizmann et al. (ref 17). Using telomerase, however, one is restricted to a specific, and much shorter, repeat sequence (in this case 5′-TTAGGG- 3′).
27. Fire, A.; Xu, S. Q. Proc. Natl. Acad. Sci. U.S.A. 1995, 92(10), 4641-4645.
28. Liu, D. Y.; Daubendiek, S. L.; Zillman, M. A.; Ryan, K.; Kool, E. T. J. Am. Chem. Soc. 1996, 118(1), 1587-1594.
29. Lizardi, P. M.; Huang, X. H.; Zhu, Z. R.; Bray-Ward, P.; Thomas, D. C.; Ward, D. C. Nature Genetics 1998, 19(3), 225-232.
30. Baner, J.; Nilsson, M.; Mendel-Hartvig, M.; Landegren, U. Nucl. Acids Res. 1998, 26(22), 5073-5078.
31. Dahl, F.; Baner, J.; Gullberg, M.; Mendel-Hartvig, M.; Landegren, U.; Nilsson, M. Proc. Natl. Acad. Sci. U.S.A. 2004, 101(13), 4548-4553.
32. Chen, Y.; Shortreed, M. R.; Peelen, D.; Lu, M. C.; Smith, L. M. J. Am. Chem. Soc. 2004, 126(10), 3016-3017.
33. Schweitzer, B.; Wiltshire, S.; Lambert, J.; O'Malley, S.; Kukanskis, K.; Zhu, Z. R.; Kingsmore, S. F.; Lizardi, P. M.; Ward, D. C. Proc. Natl. Acad. Sci. U.S.A. 2000, 97(18), 10113-10119.
34. Schweitzer, B.; Roberts, S.; Grimwade, B.; Shao, W. P.; Wang, M. J.; Fu, Q.; Shu, Q. P.; Laroche, I.; Zhou, Z. M.; Tchernev, V. T.; Christiansen, J.; Velleca, M.; Kingsmore, S. F. Nature Biotechnol. 2002, 20(4), 359-365.
35. Branch, A. D.; Robertson, H. D. Science 1984, 223(4635), 450-455.
36. Blanco, L.; Bernad, A.; Lazaro, J. M.; Martin, G.; Garmendia, C.; Salas, M. J. Biol. Chem. 1989, 264(15), 8935-8940.
37. Niemeyer, C. M.; Ceyhan, B.; Hazarika, P. Angew. Chem., Int. Ed. 2003, 42(46), 5766-5770.
38. Maier, S. A.; Kik, P. G.; Atwater, H. A.; Meltzer, S.; Harel, E.; Koel, B. E.; Requicha, A. A. G. Nature Mater. 2003, 2(4), 229-232.