Salinivibrio proteolyticus sp. nov., a moderately halophilic and proteolytic species from a hypersaline lake in Iran

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 5, 2008, Pages 1159-1163

  Amoozegar, Mohammad Ali ^a   Schumann, Peter ^b   Hajighasemi, Mahbod ^a   Fatemi, Azadeh Zahra ^a   Karbalaei Heidari, Hamid Reza ^a  

^a UNIVERSITY OF TEHRAN   (Iran)

^b LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMOXICILLIN; ANTIBIOTIC AGENT; BACITRACIN; BACTERIAL DNA; CARBENICILLIN; CEPHOXITIN; CHLORAMPHENICOL; COTRIMOXAZOLE; CYTOSINE; GUANINE; KANAMYCIN; NITROFURANTOIN; PENICILLIN G; POLYMYXIN B; RIFAMPICIN; RNA 16S; SODIUM CHLORIDE; STREPTOMYCIN; TETRACYCLINE; TOBRAMYCIN; UNCLASSIFIED DRUG; FRESH WATER; PROTEINASE; RIBOSOME DNA;

ANAEROBIC BACTERIUM; ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATE; CONTROLLED STUDY; DNA CONTENT; GENE SEQUENCE; GENUS; HALOPHILIC BACTERIUM; IRAN; LAKE; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; PRIORITY JOURNAL; SALINITY; SALINIVIBRIO PROTEOLYTICUS; SEQUENCE HOMOLOGY; STRAIN DIFFERENCE; STRAIN IDENTIFICATION; TAXONOMY; TEMPERATURE DEPENDENCE; VIBRIONACEAE; BACTERIUM IDENTIFICATION; CHEMISTRY; CLASSIFICATION; DNA BASE COMPOSITION; DNA SEQUENCE; ENZYMOLOGY; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; RNA GENE; SPECIES DIFFERENCE;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; SALINIVIBRIO; SALINIVIBRIO COSTICOLA;

BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, RIBOSOMAL; ENDOPEPTIDASES; FRESH WATER; GENES, RRNA; IRAN; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE; SPECIES SPECIFICITY; VIBRIONACEAE;

EID: 47049093569     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65423-0     Document Type: Article

References (29)

1. Baron, E. J. & Finegold, S. M. (1990). Bailey and Scott's Diagnostic Microbiology, 8th edn. St Louis: Mosby.
2. Bauer, A. W., Kirby, W. M. M., Sherris, J. C. & Turck, M. (1966). Antibiotic susceptibility testing by a standardized single disk method. Am J Clin Pathol 45, 493-496.
3. Bozzola, J. J. & Russell, L. D. (1999). Electron Microscopy: Principles and Techniques for Biologists, 2nd edn. Toronto: Jones and Bartlett.
4. Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M. (1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461-466.
5. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
6. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
7. Felsenstein, J. (1993). PHYLIP (phylogeny inference package), version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
8. Garcia, M. T., Ventosa, A., Ruiz-Berraquero, F. & Kocur, M. (1987). Taxonomic study and amended description of Vibrio costicola. Int J Syst Bacteriol 37, 251-256.
9. Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
10. Harrigan, W. F. & McCance, M. E. (1976). Laboratory Methods in Food and Dairy Microbiology. London: Academic Press.
11. Huang, C. Y., Garcia, J. L., Patel, B. K. C., Cayol, J. L., Baresi, L. & Mah, R. A. (2000). Salinivibrio costicola subsp. vallismortis subsp. nov., a halotolerant facultative anaerobe from Death Valley, and emended description of Salinivibrio costicola. Int J Syst Evol Microbiol 50, 615-622.
12. Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
13. Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
14. Klatte, S., Rainey, F. A. & Kroppenstedt, R. M. (1994). Transfer of Rhodococcus aichiensis Tsukamura 1982 and Nocardia amarae Lechevalier and Lechevalier 1974 to the genus Gordona as Gordona aichiensis comb. nov. and Gordona amarae comb. nov. Int J Syst Bacteriol 44, 769-773.
15. Kodaka, H., Armfield, A. Y., Lombard, G. L. & Dowell, V. R., Jr (1982). Practical procedure for demonstrating bacterial flagella. J Clin Microbiol 16, 948-952.
16. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
17. Mata, J. A., Martinez-Canovas, J., Quesada, E. & Bejar, V. (2002). A detailed phenotypic characterization of the type strains of Halomonas species. Syst Appl Microbiol 25, 360-375.
18. Mellado, E., Moore, E. R. B., Nieto, J. J. & Ventosa, A. (1996). Analysis of 16S rRNA gene sequences of Vibrio costicola strains: description of Salinivibrio costicola gen. nov., comb. nov. Int J Syst Bacteriol 46, 817-821.
19. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
20. Murray, R. G. E., Doetsch, R. N. & Robinow, C. F. (1994). Determinative and cytological light microscopy. In Methods for General and Molecular Bacteriology, pp. 21-41. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
21. Oren, A. (2003). Halophilic Microorganisms and their Environments. Dordrecht: Kluwer Academic Press.
22. Quesada, E., Ventosa, A., Ruiz-Berraquero, F. & Ramos- Cormenzana, A. (1984). Deleya halophila, a new species of moderately halophilic bacteria. Int J Syst Bacteriol 34, 287-292.
23. Romano, I., Gambacorta, A., Lama, L., Nicolaus, B. & Giordano, A. (2005). Salinivibrio costicola subsp. alcaliphilus subsp. nov., a haloalkaliphilic aerobe from Campania Region (Italy). Syst Appl Microbiol 28, 34-42.
24. Skerman, V. B. D., McGowan, V. & Sneath, P. H. A. (editors) (1980). Approved lists of bacterial names. Int J Syst Bacteriol 30, 225-420.
25. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
26. Smith, F. E. (1938). An investigation of a taint in rib bones of bacon. The determination of halophilic vibrios (n. spp.). Proc R Soc Queensl 49, 29-52.
27. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
28. Ventosa, A., Quesada, E., Rodríguez-Valera, F., Ruiz-Berraquero, F. & Ramos-Cormenzana, A. (1982). Numerical taxonomy of moderately halophilic Gram-negative rods. J Gen Microbiol 128, 1959-1968.
29. Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.