Salinivibrio costicola subsp. alcaliphilus subsp. nov., a haloalkaliphilic aerobe from Campania Region (Italy)

Systematic and Applied Microbiology

Volumn 28, Issue 1, 2005, Pages 34-42

  Romano, Ida ^a   Gambacorta, Agata ^a   Lama, Licia ^a   Nicolaus, Barbara ^a   Giordano, Assunta ^a,b  

^a Istituto di Chimica Biomolecolare   (Italy)

^b Assunta Giordano Ist Chim B   (Italy)

Author keywords

Alkaliphile halophile; Compatible solute; Fatty acid methyl ester; Haloalkaliphile; Lipid; Protease; Quinone; Salinivibrio

Indexed keywords

ADENINE; CYTOSINE; GUANINE; PROTEINASE; RIBOSOME RNA; THYMINE;

ARTICLE; BACTERIAL STRAIN; DNA DNA HYBRIDIZATION; GENE SEQUENCE; GRAM NEGATIVE BACTERIUM; ITALY; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; SPECIES IDENTIFICATION; SPRING; STAINING;

ALGAE; NEGIBACTERIA; SALINIVIBRIO; SALINIVIBRIO COSTICOLA;

EID: 12744280571     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.syapm.2004.10.001     Document Type: Article

References (41)

1. P. Cashion, M.A. Holder-Franklin, J.N. McCully, and M. Franklin A rapid method for the base ratio determination of bacterial DNA Anal. Biochem. 81 1977 461 466
2. J. De Ley, H. Cattoir, and A. Reynaerts The quantitative measurement of DNA hybridization from renaturation rates Eur. J. Biochem. 12 1970 133 142
3. D.C. Demirjian, S. Morìs-Varas, and C.S. Cassidy Enzymes from extremophiles Curr. Opin. Chem. Biol. 5 2001 115 144
4. H.P. Dussault An improved technique for staining red-halophilic bacteria J. Bacteriol. 70 1955 484 485
5. J.F. Escara, and J.R. Hutton Thermal stability and renaturation of DNA in dimethylsulphoxide solutions acceleration of renaturation rate Biopolymers 19 1980 1315 1327
6. J. Felsenstein, PHYLIP (Phylogeny Inference Package) version 3.5c. Department of Genetics. University of Washington. Seattle, USA, 1993.
7. M.T. Garcia, A. Ventosa, F. Ruiz-Barraquero, and M. Kocur Taxonomic study and amended description of Vibrio costicola Int. J. System. Bacteriol. 37 1987 251 256
8. S. Halebian, B. Harris, S.M. Finegold, and R.D. Rolfe Rapid method that aids in distinguishing Gram-positive from Gram-negative anaerobic bacteria J. Clin. Microbiol. 13 1981 444 448
9. D.G. Higgins, A.T. Bleasby, R. Fuchs, and W. Clustal Improved software for multiple sequence alignment CABIOS 8 1992 189 191
10. K. Horikoshi Alkaliphiles - some application of their products for biotechnology Microbiol. Mol. Biol. Rev. 63 1999 735 750
11. C.-H. Huang, J.L. Garcia, B.K.C. Pavel, J.L. Cayol, L. Baresi, and R.A. Mah Salinivibrio costicola subsp. vallismortis subsp. nov., a halotolerant facultative anaerobe from Death Valley, and emended description of Salinivibrio costicola Int. J. Syst. Evol. Microbiol. 50 2000 615 622
12. V.A.R. Huss, H. Festl, and K.H. Schleifer Studies on the spectrometric determination of DNA hybridization from renaturation rates J. Syst. Appl. Microbiol. 4 1983 184 192
13. S. Ito, T. Kobayashi, K. Ara, K. Ozaki, S. Kawai, and Y. Hatada Alkaline detergent enzymes from alkaliphilic enzymatic properties, genetics and structures Extremophiles 2 1998 185 190
14. K.D. Jahnke Basic computer program for evaluation of spectroscopic DNA renaturation data from Gilford System 2600 spectrometer on a PC/XT/AT type personal computer J. Microbiol. Methods 15 1992 61 73
15. C. Jeanthon, A.L. Reysenbach, S. L' Haridon, A. Gambacorta, R.N. Pace, P. Glènat, and D. Prieur Thermotoga subterranea sp. nov., a new thermophilic bacterium isolated from a continental oil reservoir Arch. Microbiol. 164 1995 91 97
16. T.H. Jukes, and C.R. Cantor Evolution of protein molecules H.N. Munro Mammalian Protein Metabolism vol. 3 1969 Academic Press New York 21 132
17. R. Margesin, and F. Schinner Potential of halotolerant and halophilic microorganisms for biotechnology Extremophiles 5 2001 73 83
18. E. Mellado, E.R.B. Moore, J.J. Nieto, and A. Ventosa Analysis of 16S rRNA gene sequences of Vibrio costicola strains description of Salinivibrio costicola gen. Nov., comb. nov Int. J. Syst. Bacteriol. 46 1995 817 821
19. M. Mesbah, U. Premachandran, and W. Whitman Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography Int. J. Syst. Bacteriol. 39 1989 159 167
20. A. Motta, I. Romano, and A. Gambacorta Rapid and sensitive method for osmolyte determination J. Microbiol. Methods 58 2004 289 294
21. B. Nicolaus, M.C. Manca, L. Lama, E. Esposito, and A. Gambacorta Effects of growth temperature and on the polar lipid pattern and fatty acid composition of seven thermophilic isolates from the antarctic continent Syst. Appl. Microbiol. 18 1995 32 36
22. A. Oren Halophilic Microorganisms and their Environments 2002 Kluwer Academic Press London
23. A. Oren Diversity of halophilic microorganisms environments, phylogeny, physiology, and applications J. Ind. Microbiol. Biotechnol. 28 2002 56 63
24. A. Oren, and E.A. Galinski Hydrolysis of N′-benzoyl-arginine-p- nitroanilide stereoisomers as a phenotypic test a study of Gram-positive halotolerant bacteria Syst. Appl. Microbiol. 17 1994 7 10
25. M.B. Rao, A.M. Tanksale, M.S. Ghatge, and V.V. Deshpande Molecular and biotechnological aspects of an extracellular protease from an extreme halophile Enzyme Microbiol. Technol. 62 1998 597 635
26. I. Romano, M.C. Manca, L. Lama, B. Nicolaus, and A. Gambacorta A method for antibiotic assay on Sulfolobales Biotechnol. Techn. 7 1993 439 440
27. I. Romano, B. Nicolaus, L. Lama, D. Trabasso, G. Caracciolo, and A. Gambacorta Accumulation of osmoprotectants and lipid pattern modulation in response to growth conditions by Halomonas pantelleriense Syst. Appl. Microbiol. 24 2001 342 352
28. I. Romano, A. Giordano, L. Lama, B. Nicolaus, and A. Gambacorta Planococcus rifitensis sp. nov, isolated from algal mat collected from a sulfurous spring in Campania (Italy) Syst. Appl. Microbiol. 26 2003 357 366
29. I. Romano, L. Lama, B. Nicolaus, A. Gambacorta, A. Giordano, Bacillus saliphilus sp. nov. isolated from a mineral pool in Campania (Italy), Int. J. Syst. Evol. Microbiol. http://dx.doi.org./10.1099/ijs. (2004) 0.63298-0.
30. N. Saitou, and M. Nei The neighbor-joining method a new method for reconstructing phylogenetic trees Mol. Biol. Evol. 4 1987 406 425
31. C. Sanchez-Porro, E. Mellado, C. Bertoldo, G. Antranikian, and A. Ventosa Screening and characterization of the protease CP1 produced by the moderately halophilic bacterium Pseudoalteromonas sp. strain CP76 Extremophiles 7 2003 221 228
32. C. Sanchez-Porro, S. Martin, E. Mellado, and A. Ventosa Diversity of moderately halophilic bacteria producing extracellular hydrolytic enzymes J. Appl. Microbiol. 94 2003 295 300
33. T. Sauer, and E.A. Galinski Bacterial milking a novel bioprocess for production of compatible solutes Biotechnol. Bioeng. 57 1998 306 313
34. J. Severin, A. Wohlfarth, and E.A. Galinski The predominant role of the recently discovered tetrahydropyrimidines for the osmoadaptation of halophilic eubacteria J. Gen. Microbiol. 138 1992 1629 1638
35. J.M. Shawan, and M. Veron Genus Vibrio R.E. Buchanan N.E. Gibbons Bergey's Manual of Determinative Bacteriology 8th ed 1974 Williams and Wilkins Baltimore 340 345
36. V.B.D. Skerman, V. McGowan, and P.H.A. Sneath Approved lists of bacterial names Int. J. Syst. Bacteriol. 30 1980 225 420
37. F.E. Smith An investigation of a tait in rib bones of bacon. The determination of halophilic vibrio (n.ssp) Proc. R. Soc. Queensland 49 1938 29 52
38. E. Stackebrandt, and B.M. Goebel Taxonomic note a place for DNA-DNA reassociation and 16 S rRNA sequence analysis in the present species definition in bacteriology Int. J. Syst. Bacteriol. 44 1994 846 849
39. J. Tamaoka, K. Komagata, Determination of DNA base composition by reversed-phase high-performance liquid chromatography, FEMS Microbiol.
40. L.G. Wayne, D. Brenner, R.R. Colwell, P.A.D. Grimont, O. Kandler, M.I. Krichevsky, L.H. Moore, W.E.C. Moore, R.G.E. Murray, E. Stakebrandt, M.P. Starr, and H.G. Truper Report of the ad hoc committeee on reconcilation of approaches to bacterial systematics Int. J. Syst. Bacteriol. 37 1987 463 464
41. S.G. Wilkinson Gram-negative bacteria C. Radledge S.G. Wilkinson Microbial Lipids 1988 Academic Press London pp. 488