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Volumn 95, Issue 1, 2008, Pages 40-53

Role of gp120 trimerization on HIV binding elucidated with brownian adhesive dynamics

Author keywords

[No Author keywords available]

Indexed keywords

CD4 ANTIGEN; GLYCOPROTEIN GP 120;

EID: 46749127369     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1529/biophysj.107.118430     Document Type: Article
Times cited : (11)

References (51)
  • 1
    • 36549011407 scopus 로고    scopus 로고
    • Joint United Nations Program on HIV/AIDS (UNAIDS) and World Health Organization WHO, December, UNAIDS
    • Joint United Nations Program on HIV/AIDS (UNAIDS) and World Health Organization (WHO). 2007. AIDS Epidemic Update: December 2007. UNAIDS.
    • (2007) AIDS Epidemic Update
  • 3
    • 84969825352 scopus 로고    scopus 로고
    • Jawetz, Melnick, & Adelberg's Medical Microbiology
    • 23rd Ed, McGraw Hill & Company, New York
    • Brooks, G. F., J. S. Butel, and S. A. Morse. 2004. Jawetz, Melnick, & Adelberg's Medical Microbiology, 23rd Ed. Lange Medical Series. McGraw Hill & Company, New York.
    • (2004) Lange Medical Series
    • Brooks, G.F.1    Butel, J.S.2    Morse, S.A.3
  • 4
    • 0032543307 scopus 로고    scopus 로고
    • Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody
    • Kwong, P. D., R. Wyatt, J. Robinson, R. W. Sweet, J. Sodroski, and W. A. Hendrickson. 1998. Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody. Nature. 393:648-659.
    • (1998) Nature , vol.393 , pp. 648-659
    • Kwong, P.D.1    Wyatt, R.2    Robinson, J.3    Sweet, R.W.4    Sodroski, J.5    Hendrickson, W.A.6
  • 6
    • 0025315836 scopus 로고
    • HIV requires multiple gp120 molecules for CD4-mediated infection
    • Layne, S. P., M. J. Merges, M. Dembo, J. L. Spouge, and P. L. Nara. 1990. HIV requires multiple gp120 molecules for CD4-mediated infection. Nature. 346:277-279.
    • (1990) Nature , vol.346 , pp. 277-279
    • Layne, S.P.1    Merges, M.J.2    Dembo, M.3    Spouge, J.L.4    Nara, P.L.5
  • 7
    • 0029898564 scopus 로고    scopus 로고
    • Membrane fusion mediated by the influenza virus hemagglutinin requires the concerted action of at least three hemagglutinin trimers
    • Danieli, T., S. L. Pelletier, Y. I. Henis, and J. M. White. 1996. Membrane fusion mediated by the influenza virus hemagglutinin requires the concerted action of at least three hemagglutinin trimers. J. Cell Biol. 133:559-569.
    • (1996) J. Cell Biol , vol.133 , pp. 559-569
    • Danieli, T.1    Pelletier, S.L.2    Henis, Y.I.3    White, J.M.4
  • 8
    • 25144500649 scopus 로고    scopus 로고
    • Stoichiometry of envelope glycoprotein trimers in the entry of human immunodeficiency virus type 1
    • Yang, X., S. Kurteva, X. Ren, S. Lee, and J. Sodroski. 2005. Stoichiometry of envelope glycoprotein trimers in the entry of human immunodeficiency virus type 1. J. Virol. 79:12132-12147.
    • (2005) J. Virol , vol.79 , pp. 12132-12147
    • Yang, X.1    Kurteva, S.2    Ren, X.3    Lee, S.4    Sodroski, J.5
  • 9
    • 0025904765 scopus 로고
    • Assembly and morphology of HIV: Potential effect of structure on viral function
    • Gelderblom, H. R. 1991. Assembly and morphology of HIV: potential effect of structure on viral function. AIDS. 5:617-637.
    • (1991) AIDS , vol.5 , pp. 617-637
    • Gelderblom, H.R.1
  • 10
    • 0037388765 scopus 로고    scopus 로고
    • Structural organization of authentic, mature HIV-1 virions and cores
    • Briggs, J. A., T. Wilk, R. Welker, H. G. Krausslich, and S. D. Fuller. 2003. Structural organization of authentic, mature HIV-1 virions and cores. EMBO J. 22:1707-1715.
    • (2003) EMBO J , vol.22 , pp. 1707-1715
    • Briggs, J.A.1    Wilk, T.2    Welker, R.3    Krausslich, H.G.4    Fuller, S.D.5
  • 11
  • 12
    • 0036091692 scopus 로고    scopus 로고
    • Envelope glycoprotein incorporation, not shedding of surface envelope glycoprotein (gp120/SU), is the primary determinant of SU content of purified human immunodeficiency virus type 1 and simian immunodeficiency virus
    • Chertova, E., J. J. W. Bess, Jr., B. J. Crise, I. R. Sowder, T. M. Schaden, J. M. Hilburn, J. A. Hoxie, R. E. Benveniste, J. D. Lifson, L. E. Henderson, and L. O. Arthur. 2002. Envelope glycoprotein incorporation, not shedding of surface envelope glycoprotein (gp120/SU), is the primary determinant of SU content of purified human immunodeficiency virus type 1 and simian immunodeficiency virus. J. Virol. 76:5315-5325.
    • (2002) J. Virol , vol.76 , pp. 5315-5325
    • Chertova, E.1    Bess Jr., J.J.W.2    Crise, B.J.3    Sowder, I.R.4    Schaden, T.M.5    Hilburn, J.M.6    Hoxie, J.A.7    Benveniste, R.E.8    Lifson, J.D.9    Henderson, L.E.10    Arthur, L.O.11
  • 14
    • 2942677416 scopus 로고    scopus 로고
    • Brownian adhesive dynamics (BRAD) for simulating the receptor-mediated binding of viruses
    • English, T. J., and D. A. Hammer. 2004. Brownian adhesive dynamics (BRAD) for simulating the receptor-mediated binding of viruses. Biophys. J. 86:3359-3372.
    • (2004) Biophys. J , vol.86 , pp. 3359-3372
    • English, T.J.1    Hammer, D.A.2
  • 15
    • 0018101150 scopus 로고
    • Models for the specific adhesion of cells to cells
    • Bell, G. I. 1978. Models for the specific adhesion of cells to cells. Science. 200:618-627.
    • (1978) Science , vol.200 , pp. 618-627
    • Bell, G.I.1
  • 16
    • 23244446626 scopus 로고    scopus 로고
    • Effect of microvillus deformability on leukocyte adhesion explored using adhesive dynamics simulations
    • Caputo, K. E., and D. A. Hammer. 2005. Effect of microvillus deformability on leukocyte adhesion explored using adhesive dynamics simulations. Biophys. J. 89:187-200.
    • (2005) Biophys. J , vol.89 , pp. 187-200
    • Caputo, K.E.1    Hammer, D.A.2
  • 17
    • 0026690271 scopus 로고
    • Simulation of cell rolling and adhesion on surfaces in shear flow: General results and analysis of selectin-mediated neutrophil adhesion
    • Hammer, D. A., and S. M. Apte. 1992. Simulation of cell rolling and adhesion on surfaces in shear flow: general results and analysis of selectin-mediated neutrophil adhesion. Biophys. J. 63:35-57.
    • (1992) Biophys. J , vol.63 , pp. 35-57
    • Hammer, D.A.1    Apte, S.M.2
  • 18
    • 0035909961 scopus 로고    scopus 로고
    • Multiparticle adhesive dynamics: Hydrodynamic recruitment of rolling leukocytes
    • King, M. R., and D. A. Hammer. 2001. Multiparticle adhesive dynamics: hydrodynamic recruitment of rolling leukocytes. Proc. Natl. Acad. Sci. USA. 98:14919-14924.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 14919-14924
    • King, M.R.1    Hammer, D.A.2
  • 19
    • 16344382436 scopus 로고    scopus 로고
    • A semianalytic model of leukocyte rolling
    • Krasik, E. F., and D. A. Hammer. 2004. A semianalytic model of leukocyte rolling. Biophys. J. 87:2919-2930.
    • (2004) Biophys. J , vol.87 , pp. 2919-2930
    • Krasik, E.F.1    Hammer, D.A.2
  • 20
    • 0023917132 scopus 로고
    • The reaction-limited kinetics of membrane-to-surface adhesion and detachment
    • Dembo, M., D. C. Torney, K. Saxman, and D. Hammer. 1988. The reaction-limited kinetics of membrane-to-surface adhesion and detachment. Proc. R. Soc. Lond. B. Biol. Sci. 234:55-83.
    • (1988) Proc. R. Soc. Lond. B. Biol. Sci , vol.234 , pp. 55-83
    • Dembo, M.1    Torney, D.C.2    Saxman, K.3    Hammer, D.4
  • 22
    • 33748038359 scopus 로고    scopus 로고
    • Cryo-electron tomographic structure of an immunodeficiency virus envelope complex in situ
    • Zanetti, G., J. A. G. Briggs, K. Grunewald, Q. J. Sattentau, and S. D. Fuller, 2006. Cryo-electron tomographic structure of an immunodeficiency virus envelope complex in situ. PLoS Pathogens. 2:790-797.
    • (2006) PLoS Pathogens , vol.2 , pp. 790-797
    • Zanetti, G.1    Briggs, J.A.G.2    Grunewald, K.3    Sattentau, Q.J.4    Fuller, S.D.5
  • 23
    • 33750652614 scopus 로고
    • Brownian dynamics with hydrodynamic interactions
    • Ermak, D., and J. McCammon. 1978. Brownian dynamics with hydrodynamic interactions. J. Chem. Phys. 69:1352-1360.
    • (1978) J. Chem. Phys , vol.69 , pp. 1352-1360
    • Ermak, D.1    McCammon, J.2
  • 24
    • 0004232671 scopus 로고
    • Princeton University Press, Princeton, NJ
    • Berg, H. C. 1993. Random Walks in Biology. Princeton University Press, Princeton, NJ.
    • (1993) Random Walks in Biology
    • Berg, H.C.1
  • 25
    • 0021250906 scopus 로고
    • Cell adhesion. Competition between nonspecific repulsion and specific bonding
    • Bell, G. I., M. Dembo, and P. Bongrand. 1984. Cell adhesion. Competition between nonspecific repulsion and specific bonding. Biophys. J. 45:1051-1064.
    • (1984) Biophys. J , vol.45 , pp. 1051-1064
    • Bell, G.I.1    Dembo, M.2    Bongrand, P.3
  • 26
    • 0034905478 scopus 로고    scopus 로고
    • Multiparticle adhesive dynamics. Interactions between stably rolling cells
    • King, M. R., and D. A. Hammer. 2001. Multiparticle adhesive dynamics. Interactions between stably rolling cells. Biophys. J. 81:799-813.
    • (2001) Biophys. J , vol.81 , pp. 799-813
    • King, M.R.1    Hammer, D.A.2
  • 27
    • 0031599142 scopus 로고    scopus 로고
    • Mersenne Twister: A 623-dimensionally equidistributed uniform pseudo-random number generator
    • Matsumoto, M., and T. Nishimura. 1998. Mersenne Twister: a 623-dimensionally equidistributed uniform pseudo-random number generator. ACM Trans. Model. Comput. Simul. 8:3-30.
    • (1998) ACM Trans. Model. Comput. Simul , vol.8 , pp. 3-30
    • Matsumoto, M.1    Nishimura, T.2
  • 28
    • 0344252790 scopus 로고
    • A theory of linear viscoelastic properties of dilute solutions of coiling polymers
    • Rouse, P. 1953. A theory of linear viscoelastic properties of dilute solutions of coiling polymers. J. Chem. Phys. 21:1272-1280.
    • (1953) J. Chem. Phys , vol.21 , pp. 1272-1280
    • Rouse, P.1
  • 29
    • 0033808314 scopus 로고    scopus 로고
    • Adhesive dynamics simulations of sialyl-Lewisx/E-selectin-mediated rolling in a cell-free system
    • Chang, K. C., and D. A. Hammer. 2000. Adhesive dynamics simulations of sialyl-Lewisx/E-selectin-mediated rolling in a cell-free system. Biophys. J. 79:1891-1902.
    • (2000) Biophys. J , vol.79 , pp. 1891-1902
    • Chang, K.C.1    Hammer, D.A.2
  • 31
    • 0025898680 scopus 로고
    • Lateral diffusion of CD4 on the surface of a human neoplastic T-cell line probed with a fluorescent derivative of the envelope glycoprotein (gp120) of human immunodeficiency virus type 1 (HIV-1)
    • Pal, R., B. C. Nair, G. M. Hoke, M. G. Sarngadharan, and M. Edidin. 1991. Lateral diffusion of CD4 on the surface of a human neoplastic T-cell line probed with a fluorescent derivative of the envelope glycoprotein (gp120) of human immunodeficiency virus type 1 (HIV-1). J. Cell. Physiol. 147:326-332.
    • (1991) J. Cell. Physiol , vol.147 , pp. 326-332
    • Pal, R.1    Nair, B.C.2    Hoke, G.M.3    Sarngadharan, M.G.4    Edidin, M.5
  • 32
    • 36549102274 scopus 로고
    • Brownian dynamics simulation of diffusion-influenced bimolecular reactions
    • Northrup, S. H., S. A. Allison, and J. A. McCammon. 1984. Brownian dynamics simulation of diffusion-influenced bimolecular reactions. J. Chem. Phys. 80:1517-1524.
    • (1984) J. Chem. Phys , vol.80 , pp. 1517-1524
    • Northrup, S.H.1    Allison, S.A.2    McCammon, J.A.3
  • 33
    • 21244485921 scopus 로고    scopus 로고
    • The effect of cellular receptor diffusion on receptor-mediated viral binding using Brownian adhesive dynamics (BRAD) simulations
    • English, T. J., and D. A. Hammer. 2005. The effect of cellular receptor diffusion on receptor-mediated viral binding using Brownian adhesive dynamics (BRAD) simulations. Biophys. J. 88:1666-1675.
    • (2005) Biophys. J , vol.88 , pp. 1666-1675
    • English, T.J.1    Hammer, D.A.2
  • 34
    • 4143105734 scopus 로고    scopus 로고
    • Mobility of the human immunodeficiency virus (HIV) receptor CD4 and coreceptor CCR5 in living cells: Implications for HIV fusion and entry events
    • Steffens, C. M., and T. J. Hope. 2004. Mobility of the human immunodeficiency virus (HIV) receptor CD4 and coreceptor CCR5 in living cells: implications for HIV fusion and entry events. J. Virol. 78:9573-9578.
    • (2004) J. Virol , vol.78 , pp. 9573-9578
    • Steffens, C.M.1    Hope, T.J.2
  • 35
  • 36
    • 0032710837 scopus 로고    scopus 로고
    • Use of a gp120 binding assay to dissect the requirements and kinetics of human immunodeficiency virus fusion events
    • Doranz, B. J., S. S. Baik, and R. W. Doms. 1999. Use of a gp120 binding assay to dissect the requirements and kinetics of human immunodeficiency virus fusion events. J. Virol. 73:10346-10358.
    • (1999) J. Virol , vol.73 , pp. 10346-10358
    • Doranz, B.J.1    Baik, S.S.2    Doms, R.W.3
  • 39
    • 0036239931 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 uses lipid raft-colocalized CD4 and chemokine receptors for productive entry into CD41 T cells
    • Popik, W., T. M. Alce, and W. C. Au. 2002. Human immunodeficiency virus type 1 uses lipid raft-colocalized CD4 and chemokine receptors for productive entry into CD41 T cells. J. Virol. 76:4709-4722.
    • (2002) J. Virol , vol.76 , pp. 4709-4722
    • Popik, W.1    Alce, T.M.2    Au, W.C.3
  • 40
    • 0034834457 scopus 로고    scopus 로고
    • Lipid rafts and HIV pathogenesis: Host membrane cholesterol is required for infection by HIV type 1
    • Liao, Z., L. M. Cimakasky, R. Hampton, D. H. Nguyen, and J. E. Hildreth. 2001. Lipid rafts and HIV pathogenesis: host membrane cholesterol is required for infection by HIV type 1. AIDS Res. Hum. Retroviruses. 17:1009-1019.
    • (2001) AIDS Res. Hum. Retroviruses , vol.17 , pp. 1009-1019
    • Liao, Z.1    Cimakasky, L.M.2    Hampton, R.3    Nguyen, D.H.4    Hildreth, J.E.5
  • 41
    • 15244356599 scopus 로고    scopus 로고
    • Kinetic factors control efficiencies of cell entry, efficacies of entry inhibitors, and mechanisms of adaptation of human immunodeficiency virus
    • Platt, E. J., J. P. Durnin, and D. Kabat. 2005. Kinetic factors control efficiencies of cell entry, efficacies of entry inhibitors, and mechanisms of adaptation of human immunodeficiency virus. J. Virol. 79:4347-4356.
    • (2005) J. Virol , vol.79 , pp. 4347-4356
    • Platt, E.J.1    Durnin, J.P.2    Kabat, D.3
  • 42
    • 33947408272 scopus 로고    scopus 로고
    • Time frames for neutralization during the human immunodeficiency virus type 1 entry phase, as monitored in synchronously infected cell cultures
    • Haim, H., I. Steiner, and A. Panet. 2007. Time frames for neutralization during the human immunodeficiency virus type 1 entry phase, as monitored in synchronously infected cell cultures. J. Virol. 81:3525-3534.
    • (2007) J. Virol , vol.81 , pp. 3525-3534
    • Haim, H.1    Steiner, I.2    Panet, A.3
  • 46
    • 0035951462 scopus 로고    scopus 로고
    • Chemokine/CD4 receptor density ratios correlate with HIV replication in lymph node and peripheral blood of HIV-infected individuals
    • Nokta, M. A., X. D. Li, J. Nichols, M. Mallen, A. Pou, D. Asmuth, and R. B. Pollard. 2001. Chemokine/CD4 receptor density ratios correlate with HIV replication in lymph node and peripheral blood of HIV-infected individuals. AIDS. 15:161-169.
    • (2001) AIDS , vol.15 , pp. 161-169
    • Nokta, M.A.1    Li, X.D.2    Nichols, J.3    Mallen, M.4    Pou, A.5    Asmuth, D.6    Pollard, R.B.7
  • 47
    • 0028293288 scopus 로고
    • Differences in CD4 dependence for infectivity of laboratory-adapted and primary patient isolates of human immunodeficiency virus type 1
    • Kabat, D., S. L. Kozak, K. Wehrly, and B. Chesebro. 1994. Differences in CD4 dependence for infectivity of laboratory-adapted and primary patient isolates of human immunodeficiency virus type 1. J. Virol. 68:2570-2577.
    • (1994) J. Virol , vol.68 , pp. 2570-2577
    • Kabat, D.1    Kozak, S.L.2    Wehrly, K.3    Chesebro, B.4
  • 48
    • 0033002586 scopus 로고    scopus 로고
    • Steric effects on multivalent ligand-receptor binding: Exclusion of ligand sites by bound cell surface receptors
    • Hlavacek, W. S., R. G. Posner, and A. S. Perelson. 1999. Steric effects on multivalent ligand-receptor binding: exclusion of ligand sites by bound cell surface receptors. Biophys. J. 76:3031-3043.
    • (1999) Biophys. J , vol.76 , pp. 3031-3043
    • Hlavacek, W.S.1    Posner, R.G.2    Perelson, A.S.3
  • 49
    • 0037305931 scopus 로고    scopus 로고
    • Regulation of protein mobility via thermal membrane undulations
    • Brown, F. L. H. 2003. Regulation of protein mobility via thermal membrane undulations. Biophys. J. 84:842-853.
    • (2003) Biophys. J , vol.84 , pp. 842-853
    • Brown, F.L.H.1
  • 50
    • 33646126932 scopus 로고    scopus 로고
    • Mechanics of enveloped virus entry into host cells
    • Sun, S. X., and D. Wirtz. 2006. Mechanics of enveloped virus entry into host cells. Biophys. J. 90:L10-L12.
    • (2006) Biophys. J , vol.90
    • Sun, S.X.1    Wirtz, D.2
  • 51
    • 0037953207 scopus 로고
    • Elasticity and thermal undulations of fluid films of amphiphiles
    • J. Charvolin, J. F. Joanny, and J. Zinn-Justin, editors. Elsevier Science Publishers, Dordrecht, The Netherlands
    • Helfrich, W. 1990. Elasticity and thermal undulations of fluid films of amphiphiles. In Liquids and Interfaces, Les Houches XLVIII, 1988. J. Charvolin, J. F. Joanny, and J. Zinn-Justin, editors. Elsevier Science Publishers, Dordrecht, The Netherlands.
    • (1990) Liquids and Interfaces, Les Houches XLVIII, 1988
    • Helfrich, W.1


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