Regulation of protein mobility via thermal membrane undulations

Biophysical Journal

Volumn 84, Issue 2 I, 2003, Pages 842-853

  Brown, Frank L H ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ERYTHROCYTE BAND 3 PROTEIN; MEMBRANE PROTEIN;

ARTICLE; CELL SURFACE; CYTOSKELETON; DIFFUSION; DIFFUSION COEFFICIENT; ERYTHROCYTE; LIPID BILAYER; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; MOLECULAR MECHANICS; MOLECULAR MODEL; PROTEIN STRUCTURE; PROTEIN TRANSPORT;

HUMULUS;

EID: 0037305931     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(03)74903-0     Document Type: Article

References (67)

1. Ayton, G., S. G. Bardenhagen, P. McMurty, D. Sulsky, and G. A. Voth. 2001. Interfacing continuum and molecular dynamics: An application to lipid bilayers. J. Chem. Phys. 114:6913-6924.
2. Berg, H. C., and E. M. Purcell. 1977. Physics of chemoreception. Biophys. J. 20:193-219.
3. Boal, D. H. 1994. Computer simulation of a model network for the erythrocyte cytoskeleton. Biophys. J. 67:521-529.
4. Boal, D. H., and S. K. Boey. 1995. Barrier-free paths of directed protein motion in the erythrocyte plasma membrane. Biophys. J. 69:372-379.
5. Brochard, F., and J. F. Lennon. 1975. Frequency spectrum of the flicker phenomenon in erythrocytes. J. Phys. (Paris). 36:1035-1047
6. Brown, F. L. H., D. M. Leitner, J. A. McCammon, and K. R. Wilson. 2000. Lateral diffusion of membrane proteins in the presence of static and dynamic corrals: suggestions for appropriate observables. Biophys. J. 78:2257-2269.
7. Cherry, R. J. 1979. Rotational and lateral diffusion of membrane proteins. Biochim. Biophys. Acta. 559:289-327.
8. Corbett, J. D., P. Agre, J. Palek. and D. E. Golan. 1994. Differential control of band 3 lateral and rotational mobility in intact red cells. J. Clin. Invest. 94:683-688.
9. Dai, J., and M. P. Sheetz. 1995. Regulation of endocytosis, exocytosis and shape by membrane tension. In Protein Kinesis: Dynamics of Protein Trafficking and Stability. Cold Spring Harbor Laboratory Press, New York. 567-571
10. Discher, D. E. 2000. New insights into erythrocyte membrane organization and microelasticity. Curr. Opin. Hematol. 7:117-122.
11. Drouffe, J.-M., A. C. Maggs, and S. Leibler. 1991. Computer simulations of self-assembled membranes. Science. 254:1353-1356.
12. Edidin, M., S. C. Kuo, and M. P. Sheetz. 1991. Lateral movements of membrane glycoproteins restricted by dynamic cytoplasmic barriers. Science. 254:1379-1382.
13. Ermak, D. L., and J. A. McCammon. 1978. Brownian dynamics with hydrodynamic interactions. J. Chem. Phys. 69:1352-1360.
14. Feder, T. J., I. Brust-Mascher, J. P. Slattery, B. Baird, and W. W. Webb. 1996. Constrained diffusion or immobile fraction on cell surfaces: a new interpretation. Biophys. J. 70:2767-2773.
15. Fleming, T. P. 1987. Trapped by a skeleton - the maintenance of epithelial membrane dynamics. Bioessays. 7:179-181.
16. Fujiwara, T., K. Ritchie. H. Murakoshi, K. Jacobson, and A. Kusumi. 2002. Phospholipids undergo hop diffusion in compartmentalized cell membrane. J. Cell Biol. 157: 1071-1081.
17. Fygenson, D. K., J. F. Marko, and A. Libchaber. 1997. Mechanics of microtubule-based membrane extension. Phys. Rev. Lett. 79:4497-4500.
18. Giancotti, F. G., and E. Ruoslahti. 1999. Integrin signaling. Science. 285:1028-1032.
19. Goetz, R., and R. Lipowsky. 1998. Computer simulations of bilayer membranes: Self assembly and interfacial tension, J. Chem. Phys. 108:7397-7409.
20. Golestanian, R., M. Goulian, and M. Kardar. 1996. Fluctuation-induced interactions between rods on a membrane. Phys. Rev. Lett. 54:6725-6734.
21. Gouliaev, N., and J. F. Nagle, 1998a. Simulations of a single membrane between two walls using a monte carlo method. Phys. Rev. E. 58:881-888.
22. Gouliaev, N., and J. F. Nagle. 1998b. Simulations of interacting membranes in the soft confinement regime. Phys. Rev. Lett. 81:2610-2613.
23. Goulian, M., M. Bruinsma, and P. Pincus. 1993. Long-range forces in heterogeneous fluid membranes. Europhys. Lett. 22:145-150.
24. Granek, R. 1997. From semi-flexible polymers to membranes: anomalous diffusion and reptation. J. Phys. II (Paris). 7:1761-1788.
25. Helfrich, W. 1973. Elastic properties of lipid bilayers: Theory and possible experiments. Z. Naturforsch. [C]. 28:693-703.
26. Helfrich, W. 1985. Effect of thermal undulations on the rigidity of fluid membranes and interfaces. J. Phys. (Paris). 46:1263-1268.
27. Helfrich, W., and R. M. Servuss. 1984. Undulations, steric interactions and cohesion of fluid membranes. Nuovo Cimento D. 3:137-151.
28. Jacobson, K., E. D. Sheets, and R. Simson. 1995. Revisiting the fluid mosaic model of membranes. Science. 268:1441-1442.
29. Koppel, D. E., M. P. Sheetz, and M. Schindler. 1981. Matrix control of protein diffusion in biological membranes. Proc. Natl. Acad. Sci. USA. 78:3576-3580.
30. Kumar, P. B. S., G. Gompper, and R. Lipowsky. 2001. Budding dynamics of multicomponent membranes. Phys. Rev. Lett. 86:3911-3914.
31. Kusumi, A., and Y. Sako. 1996. Cell surface organization by the membrane skeleton. Curr. Opin. Cell Bio. 8:566-574.
32. Kusumi, A., Y. Sako, and M. Yamamoto. 1993. Confined lateral diffusion of membrane receptors as studied by single particle tracking, effects of calcium-induced differentiation in cultured epithelial cells. Biophys. J. 65:2021-2040.
33. Laradji, M. 1999. Polymer adsorption on fluctuating surfaces. Europhys. Lett. 47:694-700.
34. Lauffenburger, D. A., and J. J. Linderman. 1993. Receptors: Models for Binding, Trafficking and Signaling. Oxford University Press, New York.
35. Leitner, D. M., F. L. H. Brown, and K. R. Wilson. 2000. Regulation of protein mobility in cell membranes: a dynamic corral model. Biophys. J. 78:125-135.
36. Lodish, H., D. Baltimore, A. Berk, S. L. Zipursky, P. Matsudaira, and J. Darnell. 1995. Molecular Cell Biology. 3rd ed. Scientific American Books, New York.
37. Milner, S. T., and S. A. Safran. 1987. Dynamical fluctuations of droplet microemulsions and vesicles. Phys. Rev. A. 36:4371-4379.
38. Peskin, C. S., G. M. Odell, and G. F. Oster. 1993. Cellular motions and thermal fluctuations: the brownian ratchet. Biophys. J. 65:316-324.
39. Press, W. H., S. A Teukolsky, W. T. Vetterling, and B. P. Flannery. 1994. Numerical Recipes in C. Cambridge University Press, Cambridge.
40. Purcell, E. M. 1977. Life at low reynolds number. Am. J. Phys. 45:3-10.
41. Qi, S. Y., J. T. Groves, and A. K. Chakraborty. 2001. Synaptic pattern formation during cellular recognition. Proc. Natl. Acad. Sci. USA. 98:6548-6553.
42. Saffman, P. G., and M. Delbruck. 1975. Brownian motion in biological membranes. Proc. Natl. Acad. Sci. USA. 73:3111-3113.
43. Sako, Y., and A. Kusumi. 1995. Barriers for lateral diffusion of transferrin receptor in the plasma membrane as characterized by receptor dragging by laser tweezers: fence versus tether. J. Cell. Bio. 129:1559-1574.
44. Saxton, M. J. 1989. The spectrin network as a barrier to lateral diffusion in erythrocytes: A percolation analysis. Biophys. J. 55:21-28.
45. Saxton, M. J. 1990a. The membrane skeleton of erythrocytes: A percolation model. Biophys. J. 57:1167-1177.
46. Saxton, M. J. 1990b. The membrane skeleton of erythrocytes: Models of its effect on lateral diffusion. Int. J. Biochem. 22:801-809.
47. Saxton, M. J. 1995. Single-particle tracking: Effects of corrals. Biophys. J. 69:389-398.
48. Saxton, M. J., and K. Jacobson. 1997. Single particle tracking: Applications to membrane dynamics. Annu. Rev. Biophys. Biomol. Struct. 26:373-399.
49. Schindler, M., D. E. Koppel, and M. P. Sheetz. 1980. Modulation of protein lateral mobility by polyphosphates and polyamines. Proc. Natl. Acad. Sci. USA. 77:1457-1461.
50. Schneider, M. B., J. T. Jenkins, and W. W. Webb. 1984. Thermal fluctuations of large quasi-spherical bimolecular phospholipid vesicles. J. Phys. (Paris). 45:1457-1472.
51. Sheetz, M. P. 1983. Membrane skeletal dynamics: Role in modulation of red blood cell deformability, mobility of transmembrane proteins, and shape. Semin. Hematol. 20:175-188.
52. Sheetz, M. P., M. Schindler, and D. E. Koppel. 1980. The lateral mobility of integral membrane proteins is increased in spherocytic erythrocytes. Nature. 285:510-512.
53. Shelley, J. C., M. Y. Shelley, R. C. Reeder, S. Bandyopadhyay, and M. L. Klein. 2001. A coarse grain model for phospholipid simulations. J. Phys. Chem. B. 105:4464-4470.
54. Singer, S. J., and G. L. Nicolson. 1972. The fluid mosaic model of the structure of cell membranes. Science. 175:720-731.
55. Steck, T. L. 1989. Red cell shape. In Cell Shape: Determinants, Regulation and Regulatory Role. W. Stein, and F. Bronner, editors. Academic Press, New York. 205-246.
56. Tieleman, D. P., S. J. Marrink, and H. J. Berendsen. 1997. A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems. Biochim. Biophys. Acta. 1331:235-270.
57. Tomishige, M. 1997. Regulation mechanism of the lateral diffusion of band 3 in erythrocyte membranes: corralling and binding effects of the membrane skeleton. Ph.D. thesis. The University of Tokyo.
58. Tomishige, M., Y. Sako, and A. Kusumi. 1998. Regulation mechanism of the lateral diffusion of band 3 in erythrocyte membranes by the membrane skeleton. J. Cell Bio. 142:989-1000.
59. Tsuji, A., K. Kawasaki, S. Ohnishi, H. Merkle, and A. Kusumi. 1988. Regulation of band 3 mobilities in erythrocyte ghost membranes by protein association and cytoskeletal meshwork. Biochemistry. 27:7447-7452.
60. Tsuji, A., and S. Ohnishi. 1986. Restriction of the lateral motion of band 3 in the erythrocyte membrane by the cytoskeletal network: Dependence on spectrin association state. Biochemistry. 25:6133-6139.
61. VanKampen, N. G. 1992. Stochastic Processes in Physics and Chemistry. North-Holland, Amsterdam.
62. Webb, W. W., L. S. Barak, D. W. Tank, and E.-S. Wu. 1981. Molecular mobility on the cell surface. Biochem. Soc. Symp. 46:191-205.
63. Weikl, T. R., and R. Lipowsky. 2000. Local adhesion of membranes to striped surface domains. Langmuir. 16:9338-9346.
64. Wilson, K. M., I. E. G. Morrson, P. R. Smith, N. Fernandez, and N. Cherry. 1996. Single particle tracking of cell-surface hla-dr molecules using r-phycoerythrin labeled monoclonal antibodies and fluorescence digital imaging. J. Cell Sci. 109:2101-2109.
65. Winckler, B., P. Forscher, and I. Mellman. 1999. A diffusion barrier maintains distribution of membrane proteins in polarized neurons. Nature. 397:698-701.
66. Zhang, D., A. Klyatkin, J. T. Bolin, and P. S. Low. 2000. Crystallographic structure and functional interpretation of the cytoplasmic domain of erythrocyte membrane band 3. Blood. 96:2925-2933.
67. Zhou, H.-X., S. T. Wlodek, and J. A. McCammon. 1998. Conformation gating as a mechanism for enzyme specificity. Proc. Natl. Acad. Sci. USA. 95:9280-9283.