-
1
-
-
0037686112
-
The topology of the regulatory interactions predicts the expression pattern of the Drosophila segment polarity genes
-
doi:10.1016/S0022- 5193(03)00035-3
-
Albert, R. & Othmer, H. G. 2003 The topology of the regulatory interactions predicts the expression pattern of the Drosophila segment polarity genes. J. Theor. Biol. 223, 1-18. (doi:10.1016/S0022- 5193(03)00035-3)
-
(2003)
J. Theor. Biol
, vol.223
, pp. 1-18
-
-
Albert, R.1
Othmer, H.G.2
-
2
-
-
0037324449
-
Requirements for transcriptional repression and activation by engrailed in Drosophila embryos
-
doi:10. 1242/dev.00286
-
Alexandre, C. & Vincent, J. P. 2003 Requirements for transcriptional repression and activation by engrailed in Drosophila embryos. Development 130, 729-739. (doi:10. 1242/dev.00286)
-
(2003)
Development
, vol.130
, pp. 729-739
-
-
Alexandre, C.1
Vincent, J.P.2
-
3
-
-
0033230757
-
Ci a complex transducer of the hedgehog signal
-
doi:10.1016/S0168- 9525(99)01869-7
-
Aza-Blanc, P. & Kornberg, T. B. 1999 Ci a complex transducer of the hedgehog signal. Trends Genet. 15, 458-462. (doi:10.1016/S0168- 9525(99)01869-7)
-
(1999)
Trends Genet
, vol.15
, pp. 458-462
-
-
Aza-Blanc, P.1
Kornberg, T.B.2
-
4
-
-
0031587830
-
Proteolysis that is inhibited by hedgehog targets Cubitus interruptus proteins to the nucleus and converts it to a repressor
-
doi:10.1016/S0092-8674(00)80292-5
-
Aza-Blanc, P., Ramirez-Weber, F. A., Leget, M.-P., Schwartz, C. & Kornberg, T. B. 1997 Proteolysis that is inhibited by hedgehog targets Cubitus interruptus proteins to the nucleus and converts it to a repressor. Cell 89, 1043-1053. (doi:10.1016/S0092-8674(00)80292-5)
-
(1997)
Cell
, vol.89
, pp. 1043-1053
-
-
Aza-Blanc, P.1
Ramirez-Weber, F.A.2
Leget, M.-P.3
Schwartz, C.4
Kornberg, T.B.5
-
5
-
-
0027386246
-
Segment polarity gene interactions modulate epidermal patterning in Drosophila embryos
-
Bejsovec, A. & Wieschaus, E. 1993 Segment polarity gene interactions modulate epidermal patterning in Drosophila embryos. Development 119, 501-517.
-
(1993)
Development
, vol.119
, pp. 501-517
-
-
Bejsovec, A.1
Wieschaus, E.2
-
6
-
-
0033950446
-
Sloppy paired acts as the downstream target of Wingless in the Drosophila CNS and interaction between sloppy paired and gooseberry inhibits sloppy paired during neurogenesis
-
Bhat, K. M., van Beers, E. H. & Bhat, P. 2000 Sloppy paired acts as the downstream target of Wingless in the Drosophila CNS and interaction between sloppy paired and gooseberry inhibits sloppy paired during neurogenesis. Development 127, 655-665.
-
(2000)
Development
, vol.127
, pp. 655-665
-
-
Bhat, K.M.1
van Beers, E.H.2
Bhat, P.3
-
7
-
-
0031456158
-
Wnt signaling: A common theme in animal development
-
doi:10.1101/gad.11. 24.3286
-
Cadigan, K. M. & Nusse, R. 1997 Wnt signaling: a common theme in animal development. Genes Dev. 11, 3286-3305. (doi:10.1101/gad.11. 24.3286)
-
(1997)
Genes Dev
, vol.11
, pp. 3286-3305
-
-
Cadigan, K.M.1
Nusse, R.2
-
8
-
-
0028221655
-
Localized expression of sloppy paired protein maintains the polarity of Drosophila parasegments
-
doi:10.1101/gad.8.8.899
-
Cadigan, K. M., Grossniklaus, U. & Gehring, W. J. 1994 Localized expression of sloppy paired protein maintains the polarity of Drosophila parasegments. Genes Dev. 8, 899-913. (doi:10.1101/gad.8.8.899)
-
(1994)
Genes Dev
, vol.8
, pp. 899-913
-
-
Cadigan, K.M.1
Grossniklaus, U.2
Gehring, W.J.3
-
9
-
-
29244452623
-
Piecewise linear models of genetic regulatory networks: Equilibria and their stability
-
doi:10.1007/s00285-005-0338-2
-
Casey, R., de Jong, H. & Gouzé, J. L. 2006 Piecewise linear models of genetic regulatory networks: equilibria and their stability. J. Math. Biol. 52, 27-56. (doi:10.1007/s00285-005-0338-2)
-
(2006)
J. Math. Biol
, vol.52
, pp. 27-56
-
-
Casey, R.1
de Jong, H.2
Gouzé, J.L.3
-
10
-
-
18844380444
-
Robustness and fragility of boolean models for genetic regulatory networks
-
doi:10.1016/j.jtbi. 2005.01.023
-
Chaves, M., Albert, R. & Sontag, E. D. 2005 Robustness and fragility of boolean models for genetic regulatory networks. J. Theor. Biol. 235, 431-449. (doi:10.1016/j.jtbi. 2005.01.023)
-
(2005)
J. Theor. Biol
, vol.235
, pp. 431-449
-
-
Chaves, M.1
Albert, R.2
Sontag, E.D.3
-
11
-
-
33746618913
-
Methods of robustness analysis for boolean models of gene control networks
-
doi:10. 1049/ip-syb:20050079
-
Chaves, M., Sontag, E. D. & Albert, R. 2006 Methods of robustness analysis for boolean models of gene control networks. IEE Proc. Syst. Biol. 153, 154-167. (doi:10. 1049/ip-syb:20050079)
-
(2006)
IEE Proc. Syst. Biol
, vol.153
, pp. 154-167
-
-
Chaves, M.1
Sontag, E.D.2
Albert, R.3
-
12
-
-
0023919954
-
Two-tiered regulation of spatially patterned engrailed gene expression during Drosophila embryogenesis
-
doi:10.1038/332 604a0
-
DiNardo, S., Sher, E., Heemskerk-Jongens, J., Kassis, J. A. & O'Farrell, P. H. 1988 Two-tiered regulation of spatially patterned engrailed gene expression during Drosophila embryogenesis. Nature 332, 45-53. (doi:10.1038/332 604a0)
-
(1988)
Nature
, vol.332
, pp. 45-53
-
-
DiNardo, S.1
Sher, E.2
Heemskerk-Jongens, J.3
Kassis, J.A.4
O'Farrell, P.H.5
-
13
-
-
0025283924
-
Repression of ci-d in posterior compartments of Drosophila by engrailed
-
doi:10.1101/gad.4.6.1068
-
Eaton, S. & Kornberg, T. B. 1990 Repression of ci-d in posterior compartments of Drosophila by engrailed. Genes Dev. 4, 1068-1077. (doi:10.1101/gad.4.6.1068)
-
(1990)
Genes Dev
, vol.4
, pp. 1068-1077
-
-
Eaton, S.1
Kornberg, T.B.2
-
14
-
-
0034404253
-
Combinatorial explosion in model gene networks
-
doi:10.1063/1. 1286997
-
Edwards, R. & Glass, L. 2000 Combinatorial explosion in model gene networks. Chaos 10, 691-704. (doi:10.1063/1. 1286997)
-
(2000)
Chaos
, vol.10
, pp. 691-704
-
-
Edwards, R.1
Glass, L.2
-
15
-
-
0034521484
-
Cubitus interruptus-independent transduction of the hedgehog signal in Drosophila
-
Gallet, A., Angelats, C., Kerridge, S. & Thérond, P. P. 2000 Cubitus interruptus-independent transduction of the hedgehog signal in Drosophila. Development 127, 5509-5522.
-
(2000)
Development
, vol.127
, pp. 5509-5522
-
-
Gallet, A.1
Angelats, C.2
Kerridge, S.3
Thérond, P.P.4
-
16
-
-
32544443469
-
Attractors in continuous-time switching networks
-
Gedeon, T. 2003 Attractors in continuous-time switching networks. Commun. Pure Appl. Anal. 2, 187-209.
-
(2003)
Commun. Pure Appl. Anal
, vol.2
, pp. 187-209
-
-
Gedeon, T.1
-
17
-
-
0016758861
-
Classification of biological networks by their qualitative dynamics
-
doi:10. 1016/S0022-5193(75)80056-7
-
Glass, L. 1975 Classification of biological networks by their qualitative dynamics. J. Theor. Biol. 54, 85-107. (doi:10. 1016/S0022-5193(75)80056-7)
-
(1975)
J. Theor. Biol
, vol.54
, pp. 85-107
-
-
Glass, L.1
-
18
-
-
0015609281
-
The logical analysis of continuous, nonlinear biochemical control networks
-
doi:10.1016/0022-5193(73) 90208-7
-
Glass, L. & Kauffman, S. A. 1973 The logical analysis of continuous, nonlinear biochemical control networks. J. Theor. Biol. 39, 103-129. (doi:10.1016/0022-5193(73) 90208-7)
-
(1973)
J. Theor. Biol
, vol.39
, pp. 103-129
-
-
Glass, L.1
Kauffman, S.A.2
-
19
-
-
0025744384
-
Secretion and movement of wingless protein in the epidermis of the Drosophila embryo
-
doi:10.1016/0925-4773(91)90040-D
-
Gonzalez, F., Swales, L. S., Bejsovec, A., Skaer, H. & Martinez Arias, A. 1991 Secretion and movement of wingless protein in the epidermis of the Drosophila embryo. Mech. Dev. 35, 43-54. (doi:10.1016/0925-4773(91)90040-D)
-
(1991)
Mech. Dev
, vol.35
, pp. 43-54
-
-
Gonzalez, F.1
Swales, L.S.2
Bejsovec, A.3
Skaer, H.4
Martinez Arias, A.5
-
20
-
-
0025072659
-
Cell patterning in the Drosophila segment: Spatial regulation of the segment polarity gene patched
-
Hidalgo, A. & Ingham, P. 1990 Cell patterning in the Drosophila segment: spatial regulation of the segment polarity gene patched. Development 110, 291-301.
-
(1990)
Development
, vol.110
, pp. 291-301
-
-
Hidalgo, A.1
Ingham, P.2
-
21
-
-
0024468746
-
The Drosophila patched gene encodes a putative membrane protein required for segmental patterning
-
doi:10.1016/ 0092-8674(89)90021-4
-
Hooper, J. E. & Scott, M. P. 1989 The Drosophila patched gene encodes a putative membrane protein required for segmental patterning. Cell 59, 751-765. (doi:10.1016/ 0092-8674(89)90021-4)
-
(1989)
Cell
, vol.59
, pp. 751-765
-
-
Hooper, J.E.1
Scott, M.P.2
-
22
-
-
0027033038
-
The molecular genetic basis of positional information in insect segments
-
ed. W. Hennig, pp, Berlin, Germany: Springer
-
Hooper, J. E. & Scott, M. P. 1992 The molecular genetic basis of positional information in insect segments. In Early embryonic development of animals (ed. W. Hennig), pp. 1-49. Berlin, Germany: Springer.
-
(1992)
Early embryonic development of animals
, pp. 1-49
-
-
Hooper, J.E.1
Scott, M.P.2
-
23
-
-
0032126734
-
Transducing hedgehog: The story so far
-
doi:10.1093/emboj/17.13.3505
-
Ingham, P. W. 1998 Transducing hedgehog: the story so far. EMBO J. 17, 3505-3511. (doi:10.1093/emboj/17.13.3505)
-
(1998)
EMBO J
, vol.17
, pp. 3505-3511
-
-
Ingham, P.W.1
-
24
-
-
0035577854
-
Hedgehog signaling in animal development: Paradigms and principles
-
doi:10.1101/gad.938601
-
Ingham, P. W. & McMahon, A. P. 2001 Hedgehog signaling in animal development: paradigms and principles. Genes Dev. 15, 3059-3087. (doi:10.1101/gad.938601)
-
(2001)
Genes Dev
, vol.15
, pp. 3059-3087
-
-
Ingham, P.W.1
McMahon, A.P.2
-
25
-
-
0025815911
-
Role of Drosophila patched gene in positional signaling
-
doi:10.1038/353184a0
-
Ingham, P. W., Taylor, A. M. & Nakano, Y. 1991 Role of Drosophila patched gene in positional signaling. Nature 353, 184-187. (doi:10.1038/353184a0)
-
(1991)
Nature
, vol.353
, pp. 184-187
-
-
Ingham, P.W.1
Taylor, A.M.2
Nakano, Y.3
-
26
-
-
3142517462
-
Topology and robustness in the Drosophila segment polarity network
-
doi:10.1371/journal.pbio.0020123
-
Ingolia, N. T. 2004 Topology and robustness in the Drosophila segment polarity network. PLoS Biol. 2, 0805-0815. (doi:10.1371/journal.pbio.0020123)
-
(2004)
PLoS Biol
, vol.2
, pp. 0805-0815
-
-
Ingolia, N.T.1
-
27
-
-
0029858774
-
Transcriptional activation of hedgehog target genes in Drosophila is mediated directly by the Cubitus interruptus protein, a member of the GLI family of zinc finger DNA-binding proteins
-
doi:10.1101/gad.10. 16.2003
-
Jacinto, A., Alexandre, C. & Ingham, P. W. 1996 Transcriptional activation of hedgehog target genes in Drosophila is mediated directly by the Cubitus interruptus protein, a member of the GLI family of zinc finger DNA-binding proteins. Genes Dev. 10, 2003-2013. (doi:10.1101/gad.10. 16.2003)
-
(1996)
Genes Dev
, vol.10
, pp. 2003-2013
-
-
Jacinto, A.1
Alexandre, C.2
Ingham, P.W.3
-
28
-
-
0034521482
-
Wingless effects mesoderm patterning and ectoderm segmentation events via induction of its downstream target sloppy paired
-
Lee, H.-H. & Frasch, M. 2000 Wingless effects mesoderm patterning and ectoderm segmentation events via induction of its downstream target sloppy paired. Development 127, 5497-5508.
-
(2000)
Development
, vol.127
, pp. 5497-5508
-
-
Lee, H.-H.1
Frasch, M.2
-
29
-
-
0023895153
-
Role of segment polarity genes in the definition and maintenance of cell states in the Drosophila embryo
-
Martinez Arias, A., Baker, N. & Ingham, P. W. 1988 Role of segment polarity genes in the definition and maintenance of cell states in the Drosophila embryo. Development 103, 157-170.
-
(1988)
Development
, vol.103
, pp. 157-170
-
-
Martinez Arias, A.1
Baker, N.2
Ingham, P.W.3
-
30
-
-
0033582908
-
Hedgehog controls limb development by regulating the activities of distinct transcriptional activator and repressor forms of Cubitus interruptus
-
doi:10.1016/S0092-8674(00)80592-9
-
Méthot, N. & Basler, K. 1999 Hedgehog controls limb development by regulating the activities of distinct transcriptional activator and repressor forms of Cubitus interruptus. Cell 96, 819-831. (doi:10.1016/S0092-8674(00)80592-9)
-
(1999)
Cell
, vol.96
, pp. 819-831
-
-
Méthot, N.1
Basler, K.2
-
31
-
-
0032585515
-
Hedgehog stimulates maturation of Cubitus interruptus into a labile transcriptional activator
-
doi:10.1038/25533
-
Ohlmeyer, J. T. & Kalderon, D. 1998 Hedgehog stimulates maturation of Cubitus interruptus into a labile transcriptional activator. Nature 396, 749-753. (doi:10.1038/25533)
-
(1998)
Nature
, vol.396
, pp. 749-753
-
-
Ohlmeyer, J.T.1
Kalderon, D.2
-
32
-
-
13444278821
-
Reconstruction of cellular signalling networks and analysis of their properties
-
doi:10.1038/nrm1570
-
Papin, J. A., Hunter, T., Palsson, B. O. & Subramaniam, S. 2005 Reconstruction of cellular signalling networks and analysis of their properties. Nat. Rev. Mol. Cell Biol. 6, 99-111. (doi:10.1038/nrm1570)
-
(2005)
Nat. Rev. Mol. Cell Biol
, vol.6
, pp. 99-111
-
-
Papin, J.A.1
Hunter, T.2
Palsson, B.O.3
Subramaniam, S.4
-
33
-
-
0033144461
-
Signaling at a distance: Transport of wingless in the embryonic epidermis of Drosophila
-
doi:10.1006/scdb.1999.0306
-
Pfeiffer, S. & Vincent, J.-P. 1999 Signaling at a distance: transport of wingless in the embryonic epidermis of Drosophila. Cell Dev. Biol. 10, 303-309. (doi:10.1006/scdb.1999.0306)
-
(1999)
Cell Dev. Biol
, vol.10
, pp. 303-309
-
-
Pfeiffer, S.1
Vincent, J.-P.2
-
34
-
-
0035680634
-
-
Sanson, B. 2001 Generating patterns from fields of cells. Examples from Drosophila segmentation. EMBO Rep. 21, 1083-1088. (doi:10.1093/embo-reports/kve255)
-
Sanson, B. 2001 Generating patterns from fields of cells. Examples from Drosophila segmentation. EMBO Rep. 21, 1083-1088. (doi:10.1093/embo-reports/kve255)
-
-
-
-
35
-
-
0029027783
-
Analysis of cubitus interruptus regulation in Drosophila embryos and imaginal disks
-
Schwartz, C., Locke, J., Nishida, C. & Kornberg, T. B. 1995 Analysis of cubitus interruptus regulation in Drosophila embryos and imaginal disks. Development 121, 1625-1635.
-
(1995)
Development
, vol.121
, pp. 1625-1635
-
-
Schwartz, C.1
Locke, J.2
Nishida, C.3
Kornberg, T.B.4
-
36
-
-
3042753813
-
Ftz modulates runt-dependent activation and repression of segment-polarity gene transcription
-
doi:10.1242/dev.01109
-
Swantek, D. & Gergen, J. P. 2004 Ftz modulates runt-dependent activation and repression of segment-polarity gene transcription. Development 131, 2281-2290. (doi:10.1242/dev.01109)
-
(2004)
Development
, vol.131
, pp. 2281-2290
-
-
Swantek, D.1
Gergen, J.P.2
-
37
-
-
0027096741
-
The Drosophila hedgehog gene is expressed specifically in posterior compartment cells and is a target of engrailed regulation
-
doi:10.1101/gad.6.12b.2635
-
Tabata, T., Eaton, S. & Kornberg, T. B. 1992 The Drosophila hedgehog gene is expressed specifically in posterior compartment cells and is a target of engrailed regulation. Genes Dev. 6, 2635-2645. (doi:10.1101/gad.6.12b.2635)
-
(1992)
Genes Dev
, vol.6
, pp. 2635-2645
-
-
Tabata, T.1
Eaton, S.2
Kornberg, T.B.3
-
38
-
-
0027200833
-
Contrasting distributions of patched and hedgehog proteins in the Drosophila embryo
-
doi:10.1016/0925-4773(93)90101-3
-
Taylor, A. M., Nakano, Y., Mohler, J. & Ingham, P. W. 1993 Contrasting distributions of patched and hedgehog proteins in the Drosophila embryo. Mech. Dev. 42, 89-96. (doi:10.1016/0925-4773(93)90101-3)
-
(1993)
Mech. Dev
, vol.42
, pp. 89-96
-
-
Taylor, A.M.1
Nakano, Y.2
Mohler, J.3
Ingham, P.W.4
-
39
-
-
0015823097
-
Boolean formalization of genetic control circuits
-
doi:10.1016/0022-5193(73)90247-6
-
Thomas, R. 1973 Boolean formalization of genetic control circuits. J. Theor. Biol. 42, 563-585. (doi:10.1016/0022-5193(73)90247-6)
-
(1973)
J. Theor. Biol
, vol.42
, pp. 563-585
-
-
Thomas, R.1
-
40
-
-
0029784223
-
Smoothened encodes a receptor-like serpentine protein required for hedgehog signaling
-
doi:10.1038/382547a0
-
van den Heuvel, M. & Ingham, P. W. 1996 Smoothened encodes a receptor-like serpentine protein required for hedgehog signaling. Nature 382, 547-551. (doi:10.1038/382547a0)
-
(1996)
Nature
, vol.382
, pp. 547-551
-
-
van den Heuvel, M.1
Ingham, P.W.2
-
41
-
-
0037108607
-
Design and constraints of the Drosophila segment polarity module: Robust spatial patterning emerges from intertwined cell state switches
-
doi:10.1002/jez.10144
-
von Dassow, G. & Odell, G. M. 2002 Design and constraints of the Drosophila segment polarity module: robust spatial patterning emerges from intertwined cell state switches. J. Exp. Zool. (Mol. Dev. Evol.) 294, 179-215. (doi:10.1002/jez.10144)
-
(2002)
J. Exp. Zool. (Mol. Dev. Evol.)
, vol.294
, pp. 179-215
-
-
von Dassow, G.1
Odell, G.M.2
-
42
-
-
0034644270
-
The segment polarity network is a robust developmental module
-
doi:10.1038/35018085
-
von Dassow, G., Meir, E., Munro, E. M. & Odell, G. M. 2000 The segment polarity network is a robust developmental module. Nature 406, 188-192. (doi:10.1038/35018085)
-
(2000)
Nature
, vol.406
, pp. 188-192
-
-
von Dassow, G.1
Meir, E.2
Munro, E.M.3
Odell, G.M.4
-
43
-
-
0031437362
-
Hedgehog signaling regulates transcription through Gli/Ci binding sites in the wingless enhancer
-
doi:10.1016/S0925-4773(97)00150-0
-
von Ohlen, T. & Hooper, J. E. 1997 Hedgehog signaling regulates transcription through Gli/Ci binding sites in the wingless enhancer. Mech. Dev. 68, 149-156. (doi:10.1016/S0925-4773(97)00150-0)
-
(1997)
Mech. Dev
, vol.68
, pp. 149-156
-
-
von Ohlen, T.1
Hooper, J.E.2
-
44
-
-
0004279072
-
-
London, UK: Current Biology Press
-
Wolpert, L., Beddington, R., Brockes, J., Jessell, T., Lawrence, P. & Meyerowitz, E. 1998 Principles of development. London, UK: Current Biology Press.
-
(1998)
Principles of development
-
-
Wolpert, L.1
Beddington, R.2
Brockes, J.3
Jessell, T.4
Lawrence, P.5
Meyerowitz, E.6
|