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Volumn 9, Issue 7, 2008, Pages 785-793

The chromatin-remodeling enzyme BRG1 coordinates CIITA induction through many interdependent distal enhancers

Author keywords

[No Author keywords available]

Indexed keywords

BRG1 PROTEIN; GAMMA INTERFERON; INTERFERON REGULATORY FACTOR 1; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 2; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 2 TRANSACTIVATOR; PROTEIN CIITA; PROTEIN P300; STAT1 PROTEIN; TRANSACTIVATOR PROTEIN;

EID: 45549089584     PISSN: 15292908     EISSN: 15292916     Source Type: Journal    
DOI: 10.1038/ni.1619     Document Type: Article
Times cited : (84)

References (53)
  • 1
    • 33747055643 scopus 로고    scopus 로고
    • Epigenetic regulation of MHC-II and CIITA genes
    • Wright, K.L. & Ting, J.P. Epigenetic regulation of MHC-II and CIITA genes. Trends Immunol. 27, 405-412 (2006).
    • (2006) Trends Immunol , vol.27 , pp. 405-412
    • Wright, K.L.1    Ting, J.P.2
  • 2
    • 20944445879 scopus 로고    scopus 로고
    • MHC2TA is associated with differential MHC molecule expression and susceptibility to rheumatoid arthritis, multiple sclerosis and myocardial infarction
    • Swanberg, M. et al. MHC2TA is associated with differential MHC molecule expression and susceptibility to rheumatoid arthritis, multiple sclerosis and myocardial infarction. Nat. Genet. 37, 486-494 (2005).
    • (2005) Nat. Genet , vol.37 , pp. 486-494
    • Swanberg, M.1
  • 4
    • 33750321707 scopus 로고    scopus 로고
    • Interferons, immunity and cancer immunoediting
    • Dunn, G.P., Koebel, C.M. & Schreiber, R.D. Interferons, immunity and cancer immunoediting. Nat. Rev. Immunol. 6, 836-848 (2006).
    • (2006) Nat. Rev. Immunol , vol.6 , pp. 836-848
    • Dunn, G.P.1    Koebel, C.M.2    Schreiber, R.D.3
  • 6
    • 33847016148 scopus 로고    scopus 로고
    • Therapy-induced tumor immunosurveillance involves IFN-producing killer dendritic cells
    • Ullrich, E. et al. Therapy-induced tumor immunosurveillance involves IFN-producing killer dendritic cells. Cancer Res. 67 851-853 (2007).
    • (2007) Cancer Res , vol.67 , pp. 851-853
    • Ullrich, E.1
  • 7
    • 0032006255 scopus 로고    scopus 로고
    • Activation of the MHC class II transactivator CIITA by interferon-γ requires cooperative interaction between Stat1 and USF-1
    • Muhlethaler-Mottet, A., Di Berardino, W., Otten, L.A. & Mach, B. Activation of the MHC class II transactivator CIITA by interferon-γ requires cooperative interaction between Stat1 and USF-1. Immunity 8, 157-166 (1998).
    • (1998) Immunity , vol.8 , pp. 157-166
    • Muhlethaler-Mottet, A.1    Di Berardino, W.2    Otten, L.A.3    Mach, B.4
  • 8
    • 0036274018 scopus 로고    scopus 로고
    • Kinetics of a gamma interferon response: Expression and assembly of CIITA promoter IV and inhibition by methylation
    • Morris, A.C., Beresford, G.W., Mooney, M.R. & Boss, J.M. Kinetics of a gamma interferon response: Expression and assembly of CIITA promoter IV and inhibition by methylation. Mol. Cell. Biol. 22, 4781-4791 (2002).
    • (2002) Mol. Cell. Biol , vol.22 , pp. 4781-4791
    • Morris, A.C.1    Beresford, G.W.2    Mooney, M.R.3    Boss, J.M.4
  • 9
    • 26844579129 scopus 로고    scopus 로고
    • Apical role for BRG1 in cytokine-induced promoter assembly
    • Ni, Z. et al. Apical role for BRG1 in cytokine-induced promoter assembly. Proc. Natl. Acad. Sci. USA 102, 14611-14616 (2005).
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 14611-14616
    • Ni, Z.1
  • 10
    • 0030949011 scopus 로고    scopus 로고
    • Expression of MHC class II molecules in different cellular and functional compartments is controlled by differential usage of multiple promoters of the transactivator CIITA
    • Muhlethaler-Mottet, A., Otten, L.A., Steimle, V. & Mach, B. Expression of MHC class II molecules in different cellular and functional compartments is controlled by differential usage of multiple promoters of the transactivator CIITA. EMBO J. 16, 2851-2860 (1997).
    • (1997) EMBO J , vol.16 , pp. 2851-2860
    • Muhlethaler-Mottet, A.1    Otten, L.A.2    Steimle, V.3    Mach, B.4
  • 11
    • 37849189202 scopus 로고    scopus 로고
    • Constitutive and IFNγ-induced activation of MHC2TA promoter type III in human melanoma cell lines is governed by separate regulatory elements within the PIII upstream regulatory region
    • van der Stoep, N. et al. Constitutive and IFNγ-induced activation of MHC2TA promoter type III in human melanoma cell lines is governed by separate regulatory elements within the PIII upstream regulatory region. Mol. Immunol. 44, 2036-2049 (2007).
    • (2007) Mol. Immunol , vol.44 , pp. 2036-2049
    • van der Stoep, N.1
  • 12
    • 0032908350 scopus 로고    scopus 로고
    • Two distinct gamma interferon-inducible promoters of the major histocompatibility complex class II transactivator gene are differentially regulated by STAT1, interferon regulatory factor 1, and transforming growth factor beta
    • Piskurich, J.F., Linhoff, M.W., Wang, Y. & Ting, J.P. Two distinct gamma interferon-inducible promoters of the major histocompatibility complex class II transactivator gene are differentially regulated by STAT1, interferon regulatory factor 1, and transforming growth factor beta. Mol. Cell. Biol. 19, 431-440 (1999).
    • (1999) Mol. Cell. Biol , vol.19 , pp. 431-440
    • Piskurich, J.F.1    Linhoff, M.W.2    Wang, Y.3    Ting, J.P.4
  • 13
    • 10244236502 scopus 로고    scopus 로고
    • A BAF-centred view of the immune system
    • Chi, T. A BAF-centred view of the immune system. Nat. Rev. Immunol. 4, 965-977 (2004).
    • (2004) Nat. Rev. Immunol , vol.4 , pp. 965-977
    • Chi, T.1
  • 14
    • 0037291915 scopus 로고    scopus 로고
    • Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes
    • Kadam, S. & Emerson, B.M. Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes. Mol. Cell 11, 377-389 (2003).
    • (2003) Mol. Cell , vol.11 , pp. 377-389
    • Kadam, S.1    Emerson, B.M.2
  • 15
    • 0035962635 scopus 로고    scopus 로고
    • When the SWI/SNF complex remodels...the cell cycle
    • Muchardt, C. & Yaniv, M. When the SWI/SNF complex remodels...the cell cycle. Oncogene 20, 3067-3075 (2001).
    • (2001) Oncogene , vol.20 , pp. 3067-3075
    • Muchardt, C.1    Yaniv, M.2
  • 16
    • 33847131992 scopus 로고    scopus 로고
    • Nuclear receptors and chromatin remodeling machinery
    • Trotter, K.W. & Archer, T.K. Nuclear receptors and chromatin remodeling machinery. Mol. Cell. Endocrinol. 265-266, 162-167 (2007).
    • (2007) Mol. Cell. Endocrinol , vol.265-266 , pp. 162-167
    • Trotter, K.W.1    Archer, T.K.2
  • 17
    • 0036850346 scopus 로고    scopus 로고
    • Deciphering the transcriptional histone acetylation code for a human gene
    • Agalioti, T., Chen, G. & Thanos, D. Deciphering the transcriptional histone acetylation code for a human gene. Cell 111, 381-392 (2002).
    • (2002) Cell , vol.111 , pp. 381-392
    • Agalioti, T.1    Chen, G.2    Thanos, D.3
  • 18
    • 2442691703 scopus 로고    scopus 로고
    • Temporal recruitment of transcription factors and SWI/SNF chromatin-remodeling enzymes during adipogenic induction of the peroxisome proliferator-activated receptor γ nuclear hormone receptor
    • Salma, N., Xiao, H., Mueller, E, & Imbalzano, A.N. Temporal recruitment of transcription factors and SWI/SNF chromatin-remodeling enzymes during adipogenic induction of the peroxisome proliferator-activated receptor γ nuclear hormone receptor. Mol. Cell. Biol. 24, 4651-4663 (2004).
    • (2004) Mol. Cell. Biol , vol.24 , pp. 4651-4663
    • Salma, N.1    Xiao, H.2    Mueller, E.3    Imbalzano, A.N.4
  • 19
    • 0032475845 scopus 로고    scopus 로고
    • Armstrong, J.A., Bieker, J.J. & Emerson, B.M.A. SWI/SNF-related chromatin remodeling complex, E-RC1, is required for tissue-specific transcriptional regulation by EKLF in vitro. Cell 95, 93-104 (1998).
    • Armstrong, J.A., Bieker, J.J. & Emerson, B.M.A. SWI/SNF-related chromatin remodeling complex, E-RC1, is required for tissue-specific transcriptional regulation by EKLF in vitro. Cell 95, 93-104 (1998).
  • 20
    • 0032492846 scopus 로고    scopus 로고
    • Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex
    • Fryer, C.J. & Archer, T.K. Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex. Nature 393, 88-91 (1998).
    • (1998) Nature , vol.393 , pp. 88-91
    • Fryer, C.J.1    Archer, T.K.2
  • 21
    • 0035838992 scopus 로고    scopus 로고
    • Regulation of CSF1 promoter by the SWI/SNF-like BAF complex
    • Liu, R. et al. Regulation of CSF1 promoter by the SWI/SNF-like BAF complex. Cell 106, 309-318 (2001).
    • (2001) Cell , vol.106 , pp. 309-318
    • Liu, R.1
  • 22
    • 0036723647 scopus 로고    scopus 로고
    • Maximal induction of a subset of interferon target genes requires the chromatin-remodeling activity of the BAF complex
    • Liu, H, Kang, H., Liu, R., Chen, X. & Zhao, K. Maximal induction of a subset of interferon target genes requires the chromatin-remodeling activity of the BAF complex. Mol. Cell. Biol. 22, 6471-6479 (2002).
    • (2002) Mol. Cell. Biol , vol.22 , pp. 6471-6479
    • Liu, H.1    Kang, H.2    Liu, R.3    Chen, X.4    Zhao, K.5
  • 23
    • 0037062922 scopus 로고    scopus 로고
    • Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes
    • Chi, T.H. et al. Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes. Nature 418, 195-199 (2002).
    • (2002) Nature , vol.418 , pp. 195-199
    • Chi, T.H.1
  • 24
    • 33750465872 scopus 로고    scopus 로고
    • SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes
    • Cai, S., Lee, C.C. & Kohwi-Shigematsu, T. SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes. Nat. Genet. 38, 1278-1288 (2006).
    • (2006) Nat. Genet , vol.38 , pp. 1278-1288
    • Cai, S.1    Lee, C.C.2    Kohwi-Shigematsu, T.3
  • 25
    • 28044437502 scopus 로고    scopus 로고
    • Chromatin domain activation via GATA-1 utilization of a small subset of dispersed GATA motifs within a broad chromosomal region
    • Im, H. et al. Chromatin domain activation via GATA-1 utilization of a small subset of dispersed GATA motifs within a broad chromosomal region. Proc. Natl. Acad. Sci. USA 102, 17065-17070 (2005).
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 17065-17070
    • Im, H.1
  • 26
    • 0033582269 scopus 로고    scopus 로고
    • Tissue-specific and developmental stage-specific DNA binding by a mammalian SWI/SNF complex associated with human fetal-to-adult globin gene switching
    • O'Neill, D. et al. Tissue-specific and developmental stage-specific DNA binding by a mammalian SWI/SNF complex associated with human fetal-to-adult globin gene switching. Proc. Natl. Acad. Sci. USA 96, 349-354 (1999).
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 349-354
    • O'Neill, D.1
  • 27
    • 28444439242 scopus 로고    scopus 로고
    • Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in β-globin expression and erythroid development
    • Bultman, S.J., Gebuhr, T.C. & Magnuson, T.A. Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in β-globin expression and erythroid development. Genes Dev. 19, 2849-2861 (2005).
    • (2005) Genes Dev , vol.19 , pp. 2849-2861
    • Bultman, S.J.1    Gebuhr, T.C.2    Magnuson, T.A.3
  • 28
    • 34250183131 scopus 로고    scopus 로고
    • Dissecting molecular steps in chromatin domain activation during hematopoietic differentiation
    • Kim, S.I., Bultman, S.J., Jing, H., Blobel, G.A. & Bresnick, E.H. Dissecting molecular steps in chromatin domain activation during hematopoietic differentiation. Mol. Cell. Biol. 27, 4551-4565 (2007).
    • (2007) Mol. Cell. Biol , vol.27 , pp. 4551-4565
    • Kim, S.I.1    Bultman, S.J.2    Jing, H.3    Blobel, G.A.4    Bresnick, E.H.5
  • 29
    • 0344938355 scopus 로고    scopus 로고
    • The SWI/SNF complex creates loop domains in DNA and polynucleosome arrays and can disrupt DNA-histone contacts within these domains
    • Bazett-Jones, D.P., Cote, J., Landel, C.C., Peterson, C.L. & Workman, J.L. The SWI/SNF complex creates loop domains in DNA and polynucleosome arrays and can disrupt DNA-histone contacts within these domains. Mol. Cell. Biol. 19, 1470-1478 (1999).
    • (1999) Mol. Cell. Biol , vol.19 , pp. 1470-1478
    • Bazett-Jones, D.P.1    Cote, J.2    Landel, C.C.3    Peterson, C.L.4    Workman, J.L.5
  • 30
    • 0037090777 scopus 로고    scopus 로고
    • Interferon-gamma-induced chromatin remodeling at the CIITA locus is BRG1 dependent
    • Pattenden, S.G., Klose, R., Karaskov, E. & Bremner, R. Interferon-gamma-induced chromatin remodeling at the CIITA locus is BRG1 dependent. EMBO J. 21, 1978-1986 (2002).
    • (2002) EMBO J , vol.21 , pp. 1978-1986
    • Pattenden, S.G.1    Klose, R.2    Karaskov, E.3    Bremner, R.4
  • 31
    • 0036800352 scopus 로고    scopus 로고
    • Chromatin-remodelling factor BRG1 selectively activates a subset of interferon-α-inducible genes
    • Huang, M. et al. Chromatin-remodelling factor BRG1 selectively activates a subset of interferon-α-inducible genes. Nat. Cell Biol. 4, 774-781 (2002).
    • (2002) Nat. Cell Biol , vol.4 , pp. 774-781
    • Huang, M.1
  • 32
    • 2942592799 scopus 로고    scopus 로고
    • The chromatin-remodeling BAF complex mediates cellular antiviral activities by promoter priming
    • Cui, K. et al. The chromatin-remodeling BAF complex mediates cellular antiviral activities by promoter priming. Mol. Cell. Biol. 24, 4476-4486 (2004).
    • (2004) Mol. Cell. Biol , vol.24 , pp. 4476-4486
    • Cui, K.1
  • 33
    • 23044461703 scopus 로고    scopus 로고
    • PBAF chromatin-remodeling complex requires a novel specificity subunit, BAF200, to regulate expression of selective interferon-responsive genes
    • Yan, Z. et al. PBAF chromatin-remodeling complex requires a novel specificity subunit, BAF200, to regulate expression of selective interferon-responsive genes. Genes Dev. 19, 1662-1667 (2005).
    • (2005) Genes Dev , vol.19 , pp. 1662-1667
    • Yan, Z.1
  • 34
    • 33845936850 scopus 로고    scopus 로고
    • Brahma-related gene 1-dependent STAT3 recruitment at IL-6-inducible genes
    • Ni, Z. & Bremner, R. Brahma-related gene 1-dependent STAT3 recruitment at IL-6-inducible genes. J. Immunol. 178, 345-351 (2007).
    • (2007) J. Immunol , vol.178 , pp. 345-351
    • Ni, Z.1    Bremner, R.2
  • 35
    • 19944430797 scopus 로고    scopus 로고
    • Genomic maps and comparative analysis of histone modificattions in human and mouse
    • Bernstein, B.E. et al. Genomic maps and comparative analysis of histone modificattions in human and mouse. Cell 120, 169-181 (2005).
    • (2005) Cell , vol.120 , pp. 169-181
    • Bernstein, B.E.1
  • 36
    • 33847334699 scopus 로고    scopus 로고
    • Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
    • Heintzman, N.D. et al. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat. Genet. 39, 311-318 (2007).
    • (2007) Nat. Genet , vol.39 , pp. 311-318
    • Heintzman, N.D.1
  • 38
    • 0037083376 scopus 로고    scopus 로고
    • Capturing chromosome conformation
    • Dekker, J., Rippe, K., Dekker, M. & Kleckner, N. Capturing chromosome conformation. Science 295, 1306-1311 (2002).
    • (2002) Science , vol.295 , pp. 1306-1311
    • Dekker, J.1    Rippe, K.2    Dekker, M.3    Kleckner, N.4
  • 39
    • 33745619776 scopus 로고    scopus 로고
    • Maternal BRG1 regulates zygotic genome activation in the mouse
    • Bultman, S.J. et al. Maternal BRG1 regulates zygotic genome activation in the mouse. Genes Dev. 20, 1744-1754 (2006).
    • (2006) Genes Dev , vol.20 , pp. 1744-1754
    • Bultman, S.J.1
  • 40
    • 18744410349 scopus 로고    scopus 로고
    • ALL-1 is a histone methyltransferase that assembles a super-complex of proteins involved in transcriptional regulation
    • Nakamura, T. et al. ALL-1 is a histone methyltransferase that assembles a super-complex of proteins involved in transcriptional regulation. Mol. Cell 10, 1119-1128 (2002).
    • (2002) Mol. Cell , vol.10 , pp. 1119-1128
    • Nakamura, T.1
  • 41
    • 0033780721 scopus 로고    scopus 로고
    • Mitotic stability of an episomal vector containing a human scaffold/matrix-attached region is provided by association with nuclear matrix
    • Baiker, A. et al. Mitotic stability of an episomal vector containing a human scaffold/matrix-attached region is provided by association with nuclear matrix. Nat. Cell Biol. 2, 182-184 (2000).
    • (2000) Nat. Cell Biol , vol.2 , pp. 182-184
    • Baiker, A.1
  • 43
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • Barski, A. et al. High-resolution profiling of histone methylations in the human genome. Cell 129, 823-837 (2007).
    • (2007) Cell , vol.129 , pp. 823-837
    • Barski, A.1
  • 44
    • 33646872978 scopus 로고    scopus 로고
    • Chromatin signatures of pluripotent cell lines
    • Azuara, V. et al. Chromatin signatures of pluripotent cell lines. Nat. Cell Biol. 8, 532-538 (2006).
    • (2006) Nat. Cell Biol , vol.8 , pp. 532-538
    • Azuara, V.1
  • 45
    • 29144475515 scopus 로고    scopus 로고
    • Global changes in STAT target selection and transcription regulation upon interferon treatments
    • Hartman, S.E. et al. Global changes in STAT target selection and transcription regulation upon interferon treatments. Genes Dev. 19, 2953-2968 (2005).
    • (2005) Genes Dev , vol.19 , pp. 2953-2968
    • Hartman, S.E.1
  • 46
    • 34250370060 scopus 로고    scopus 로고
    • Mapping the chromosomal targets of STAT1 by sequence tag analysis of genomic enrichment (STAGE)
    • Bhinge, A.A., Kim, J., Euskirchen, G.M., Snyder, M. & Iyer, V.R. Mapping the chromosomal targets of STAT1 by sequence tag analysis of genomic enrichment (STAGE). Genome Res. 17, 910-916 (2007).
    • (2007) Genome Res , vol.17 , pp. 910-916
    • Bhinge, A.A.1    Kim, J.2    Euskirchen, G.M.3    Snyder, M.4    Iyer, V.R.5
  • 47
    • 34547633677 scopus 로고    scopus 로고
    • Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing
    • Robertson, G. et al. Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing. Nat. Methods 4, 651-657 (2007).
    • (2007) Nat. Methods , vol.4 , pp. 651-657
    • Robertson, G.1
  • 48
    • 35548965486 scopus 로고    scopus 로고
    • P-STAT1 mediates higher-order chromatin remodelling of the human MHC in response to IFNy
    • Christova, R. et al. P-STAT1 mediates higher-order chromatin remodelling of the human MHC in response to IFNy. J. Cell. Sci. 120, 3262-3270 (2007).
    • (2007) J. Cell. Sci , vol.120 , pp. 3262-3270
    • Christova, R.1
  • 49
    • 33645459867 scopus 로고    scopus 로고
    • Aldosterone-sensitive repression of ENaCα transcription by a histone H3 lysine-79 methyltransferase
    • Zhang, W. et al. Aldosterone-sensitive repression of ENaCα transcription by a histone H3 lysine-79 methyltransferase. Am. J. Physiol. Cell Physiol. 290, C936-C946 (2006).
    • (2006) Am. J. Physiol. Cell Physiol , vol.290
    • Zhang, W.1
  • 50
    • 42149146774 scopus 로고    scopus 로고
    • DOT1L/KMT4 recruitment and H3K79 methylation are ubiquitously coupled with gene transcription in mammalian cells
    • Steger, D.J. et al. DOT1L/KMT4 recruitment and H3K79 methylation are ubiquitously coupled with gene transcription in mammalian cells. Mol Cell Biol (2008).
    • (2008) Mol Cell Biol
    • Steger, D.J.1
  • 51
    • 0026580006 scopus 로고
    • brahma: A regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SW12
    • Tamkun, J.W. et al. brahma: A regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SW12. Cell 68, 561-572 (1992).
    • (1992) Cell , vol.68 , pp. 561-572
    • Tamkun, J.W.1
  • 53
    • 0037351881 scopus 로고    scopus 로고
    • Cyclic, proteasome-mediated turnover of unliganded and liganded ERα on responsive promoters is an integral feature of estrogen signaling
    • Reid, G. et al. Cyclic, proteasome-mediated turnover of unliganded and liganded ERα on responsive promoters is an integral feature of estrogen signaling. Mol. Cell 11, 695-707 (2003).
    • (2003) Mol. Cell , vol.11 , pp. 695-707
    • Reid, G.1


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