-
1
-
-
0033158443
-
Pathology, isolation, and preliminary molecular characterization of a novel iridovirus from tiger salamanders in Saskatchewan
-
Bollinger, T.K., Mao, J., Schock, D., Brigham, R.M. Chinchar, V.G. 1999. Pathology, isolation, and preliminary molecular characterization of a novel iridovirus from tiger salamanders in Saskatchewan. J. Wildl. Dis. 35:413 429.
-
(1999)
J. Wildl. Dis.
, vol.35
, pp. 413-429
-
-
Bollinger, T.K.1
Mao, J.2
Schock, D.3
Brigham, R.M.4
Chinchar, V.G.5
-
2
-
-
0036008606
-
Ranaviruses (family Iridoviridae): Emerging cold-blooded killers - Brief review
-
Chinchar, V.G. 2002. Ranaviruses (family Iridoviridae): emerging cold-blooded killers - brief review. Arch. Virol. 147:447 470.
-
(2002)
Arch. Virol.
, vol.147
, pp. 447-470
-
-
Chinchar, V.G.1
-
3
-
-
0000947505
-
Distribution, habitats and life-history variation in the tiger salamander, Ambystoma tigrinum, in east-central and southeast Arizona
-
Collins, J. 1981. Distribution, habitats and life-history variation in the tiger salamander, Ambystoma tigrinum, in east-central and southeast Arizona. Copeia 1981:666 675.
-
(1981)
Copeia
, vol.1981
, pp. 666-675
-
-
Collins, J.1
-
4
-
-
0029563023
-
A method for estimating the numbers of synonymous and non-synonymous substitutions per site
-
Comeron, J.M. 1995. A method for estimating the numbers of synonymous and non-synonymous substitutions per site. J. Mol. Evol. 41:1152 1159.
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 1152-1159
-
-
Comeron, J.M.1
-
5
-
-
0030816742
-
Can three incongruence tests predict when data should be combined?
-
Cunningham, C.W. 1997a. Can three incongruence tests predict when data should be combined? Mol. Biol. Evol. 14:733 740.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 733-740
-
-
Cunningham, C.W.1
-
6
-
-
0031224810
-
Is congruence between data partitions a reliable predictor of phylogenetic accuracy? Empirically testing an iterative procedure for choosing among phylogenetic methods
-
Cunningham, C.W. 1997b. Is congruence between data partitions a reliable predictor of phylogenetic accuracy? Empirically testing an iterative procedure for choosing among phylogenetic methods Syst. Biol. 46:464 478.
-
(1997)
Syst. Biol.
, vol.46
, pp. 464-478
-
-
Cunningham, C.W.1
-
7
-
-
0037337826
-
Infectious disease and amphibian population declines
-
Daszak, P., Cunningham, A.A. Hyatt, A.D. 2003. Infectious disease and amphibian population declines. Divers. Distrib. 9:141 150.
-
(2003)
Divers. Distrib.
, vol.9
, pp. 141-150
-
-
Daszak, P.1
Cunningham, A.A.2
Hyatt, A.D.3
-
8
-
-
33748639258
-
Genome of invertebrate iridescent virus type 3 (mosquito iridescent virus)
-
Delhon, G., Tulman, E.R., Afonso, C.L., Lu, Z., Becnel, J.J., Moser, B.A., Kutish, G.F. Rock, D.L. 2006. Genome of invertebrate iridescent virus type 3 (mosquito iridescent virus). J. Virol. 80:8439 8449.
-
(2006)
J. Virol.
, vol.80
, pp. 8439-8449
-
-
Delhon, G.1
Tulman, E.R.2
Afonso, C.L.3
Lu, Z.4
Becnel, J.J.5
Moser, B.A.6
Kutish, G.F.7
Rock, D.L.8
-
9
-
-
84989432221
-
Testing significance of incongruence
-
Farris, J.S., Kallersjo, M., Kluge, A.G. Bult, C. 1995. Testing significance of incongruence. Cladistics 10:315 319.
-
(1995)
Cladistics
, vol.10
, pp. 315-319
-
-
Farris, J.S.1
Kallersjo, M.2
Kluge, A.G.3
Bult, C.4
-
10
-
-
0026443745
-
Phylogenies from restriction sites - A maximum-likelihood approach
-
Felsenstein, J. 1992. Phylogenies from restriction sites - a maximum-likelihood approach. Evolution 46:173.
-
(1992)
Evolution
, vol.46
, pp. 173
-
-
Felsenstein, J.1
-
11
-
-
33750164674
-
First case of ranavirus-associated morbidity and mortality in natural populations of the South American frog Atelognathus patagonicus
-
Fox, S.F., Greer, A.L., Torres-Cervantes, R. Collins, J.P. 2006. First case of ranavirus-associated morbidity and mortality in natural populations of the South American frog Atelognathus patagonicus. Dis. Aquat. Organ. 72:87 92.
-
(2006)
Dis. Aquat. Organ.
, vol.72
, pp. 87-92
-
-
Fox, S.F.1
Greer, A.L.2
Torres-Cervantes, R.3
Collins, J.P.4
-
12
-
-
14844313275
-
Inferring species phylogenies from multiple genes: Concatenated sequence tree versus consensus gene tree
-
Gadagkar, S.R., Rosenberg, M.S. Kumar, S. 2005. Inferring species phylogenies from multiple genes: concatenated sequence tree versus consensus gene tree. J. Exp. Zool. B: Mol. Dev. Evol. 304:64 74.
-
(2005)
J. Exp. Zool. B: Mol. Dev. Evol.
, vol.304
, pp. 64-74
-
-
Gadagkar, S.R.1
Rosenberg, M.S.2
Kumar, S.3
-
13
-
-
0036128336
-
Local adaptation and the geometry of host-parasite coevolution
-
Gandon, S. 2002. Local adaptation and the geometry of host-parasite coevolution. Ecol. Lett. 5:246 256.
-
(2002)
Ecol. Lett.
, vol.5
, pp. 246-256
-
-
Gandon, S.1
-
14
-
-
33747065657
-
Remarkable amphibian biomass and abundance in an isolated wetland: Implications for wetland conservation
-
Gibbons, J.W., Winne, C.T., Scott, D.E., Willson, J.D., Glaudas, X., Andrews, K.M., Todd, B.D., Fedewa, L.A., Wilkinson, L., Tsaliagos, R.N., Harper, S.J., Greene, J.L., Tuberville, T.D., Metts, B.S., Dorcas, M.E., Nestor, J.P., Young, C.A., Akre, T., Reed, R.N., Buhlmann, K.A., Norman, J., Croshaw, D.A., Hagen, C. Rothermel, B.B. 2006. Remarkable amphibian biomass and abundance in an isolated wetland: implications for wetland conservation. Conserv. Biol. 20:1457 1465.
-
(2006)
Conserv. Biol.
, vol.20
, pp. 1457-1465
-
-
Gibbons, J.W.1
Winne, C.T.2
Scott, D.E.3
Willson, J.D.4
Glaudas, X.5
Andrews, K.M.6
Todd, B.D.7
Fedewa, L.A.8
Wilkinson, L.9
Tsaliagos, R.N.10
Harper, S.J.11
Greene, J.L.12
Tuberville, T.D.13
Metts, B.S.14
Dorcas, M.E.15
Nestor, J.P.16
Young, C.A.17
Akre, T.18
Reed, R.N.19
Buhlmann, K.A.20
Norman, J.21
Croshaw, D.A.22
Hagen, C.23
Rothermel, B.B.24
more..
-
15
-
-
34247644804
-
Do's and don'ts of testing the geographic mosaic theory of coevolution
-
Gomulkiewicz, R., Drown, D.M., Dybdahl, M.F., Godsoe, W., Nuismer, S.L., Pepin, K.M., Ridenhour, B.J., Smith, C.I. Yoder, J.B. 2007. Do's and don'ts of testing the geographic mosaic theory of coevolution. Heredity 98:249 258.
-
(2007)
Heredity
, vol.98
, pp. 249-258
-
-
Gomulkiewicz, R.1
Drown, D.M.2
Dybdahl, M.F.3
Godsoe, W.4
Nuismer, S.L.5
Pepin, K.M.6
Ridenhour, B.J.7
Smith, C.I.8
Yoder, J.B.9
-
16
-
-
0036411698
-
Epizootiology of sixty-four amphibian morbidity and mortality events in the USA, 1996-2001
-
Green, D.E., Converse, K.A. Schrader, A.K. 2002. Epizootiology of sixty-four amphibian morbidity and mortality events in the USA, 1996-2001. Domestic Animal/Wildlife Interface: Issue for Disease Control, Conservation, Sustainable Food Practice, and Emerging Diseases 969:323 339.
-
(2002)
Domestic Animal/Wildlife Interface: Issue for Disease Control, Conservation, Sustainable Food Practice, and Emerging Diseases
, vol.969
, pp. 323-339
-
-
Green, D.E.1
Converse, K.A.2
Schrader, A.K.3
-
17
-
-
32044457700
-
Mastercard: A priceless link to innate immunity
-
Hiscott, J., Lin, R., Nakhaei, P. Paz, S. 2006. Mastercard: a priceless link to innate immunity. Trends Mol. Med. 12:53 56.
-
(2006)
Trends Mol. Med.
, vol.12
, pp. 53-56
-
-
Hiscott, J.1
Lin, R.2
Nakhaei, P.3
Paz, S.4
-
18
-
-
33646586721
-
A Dirichlet process model for detecting positive selection in protein-coding DNA sequences
-
Huelsenbeck, J.P., Jain, S., Frost, S.W.D. Pond, S.L.K. 2006. A Dirichlet process model for detecting positive selection in protein-coding DNA sequences. Proc. Natl Acad. Sci. U. S. A. 103:6263 6268.
-
(2006)
Proc. Natl Acad. Sci. U. S. A.
, vol.103
, pp. 6263-6268
-
-
Huelsenbeck, J.P.1
Jain, S.2
Frost, S.W.D.3
Pond, S.L.K.4
-
19
-
-
0031592277
-
Isolation of a lethal virus from the endangered tiger salamander Ambystoma tigrinum stebbinsi
-
Jancovich, J., Davidson, E., Morado, J., Jacobs, B. Collins, J. 1997. Isolation of a lethal virus from the endangered tiger salamander Ambystoma tigrinum stebbinsi. Dis. Aquat. Organ. 31:167.
-
(1997)
Dis. Aquat. Organ.
, vol.31
, pp. 167
-
-
Jancovich, J.1
Davidson, E.2
Morado, J.3
Jacobs, B.4
Collins, J.5
-
20
-
-
0242352467
-
Genomic sequence of a ranavirus (family Iridoviridae) associated with salamander mortalities in North America
-
Jancovich, J.K., Mao, J., Chinchar, V.G., Wyatt, C., Case, S.T., Kumar, S., Valente, G., Subramanian, S., Davidson, E.W., Collins, J.P. Jacobs, B.L. 2003. Genomic sequence of a ranavirus (family Iridoviridae) associated with salamander mortalities in North America. Virology 316:90 103.
-
(2003)
Virology
, vol.316
, pp. 90-103
-
-
Jancovich, J.K.1
Mao, J.2
Chinchar, V.G.3
Wyatt, C.4
Case, S.T.5
Kumar, S.6
Valente, G.7
Subramanian, S.8
Davidson, E.W.9
Collins, J.P.10
Jacobs, B.L.11
-
21
-
-
12444297608
-
Evidence for emergence of an amphibian iridoviral disease because of human-enhanced spread
-
Jancovich, J.K., Davidson, E.W., Parameswaran, N., Mao, J., Chinchar, V.G., Collins, J.P., Jacobs, B.L. Storfer, A. 2005. Evidence for emergence of an amphibian iridoviral disease because of human-enhanced spread. Mol. Ecol. 14:213 224.
-
(2005)
Mol. Ecol.
, vol.14
, pp. 213-224
-
-
Jancovich, J.K.1
Davidson, E.W.2
Parameswaran, N.3
Mao, J.4
Chinchar, V.G.5
Collins, J.P.6
Jacobs, B.L.7
Storfer, A.8
-
22
-
-
30544444850
-
Card games between virus and host get a new player
-
Johnson, C.L. Gale, M.J. 2006. Card games between virus and host get a new player. Trends Immunol. 27:1 4.
-
(2006)
Trends Immunol.
, vol.27
, pp. 1-4
-
-
Johnson, C.L.1
Gale, M.J.2
-
23
-
-
3242810318
-
Mega3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., Tamura, K. Nei, M. 2004. mega3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinformatics 5:150 163.
-
(2004)
Brief Bioinformatics
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
24
-
-
2942722691
-
Inhibition of PKR by vaccinia virus: Role of the n- and c-terminal domains of e3l
-
Langland, J.O. Jacobs, B.L. 2004. Inhibition of PKR by vaccinia virus: role of the n- and c-terminal domains of e3l. Virology 324:419 429.
-
(2004)
Virology
, vol.324
, pp. 419-429
-
-
Langland, J.O.1
Jacobs, B.L.2
-
25
-
-
0027403961
-
Unbiased estimation of the rates of synonymous and non-synonymous substitution
-
Li, W.H. 1993. Unbiased estimation of the rates of synonymous and non-synonymous substitution. J. Mol. Evol. 36:96 99.
-
(1993)
J. Mol. Evol.
, vol.36
, pp. 96-99
-
-
Li, W.H.1
-
26
-
-
33644786992
-
Emerging infectious disease and the loss of biodiversity in a neotropical amphibian community
-
Lips, K.R., Brem, F., Brenes, R., Reeve, J.D., Alford, R.A., Voyles, J., Carey, C., Livo, L., Pessier, A.P. Collins, J.P. 2006. Emerging infectious disease and the loss of biodiversity in a neotropical amphibian community. Proc. Natl Acad. Sci. U. S. A. 103:3165 3170.
-
(2006)
Proc. Natl Acad. Sci. U. S. A.
, vol.103
, pp. 3165-3170
-
-
Lips, K.R.1
Brem, F.2
Brenes, R.3
Reeve, J.D.4
Alford, R.A.5
Voyles, J.6
Carey, C.7
Livo, L.8
Pessier, A.P.9
Collins, J.P.10
-
27
-
-
0036018468
-
Rapid differentiation of Australian, European and American ranaviruses based on variation in major capsid protein gene sequence
-
Marsh, I.B., Whittington, R.J., O'Rourke, B., Hyatt, A.D. Chisholm, O. 2002. Rapid differentiation of Australian, European and American ranaviruses based on variation in major capsid protein gene sequence. Mol. Cell. Probes 16:137 151.
-
(2002)
Mol. Cell. Probes
, vol.16
, pp. 137-151
-
-
Marsh, I.B.1
Whittington, R.J.2
O'Rourke, B.3
Hyatt, A.D.4
Chisholm, O.5
-
28
-
-
0242487488
-
Performance-based selection of likelihood models for phylogeny estimation
-
Minin, V., Abdo, Z., Joyce, P. Sullivan, J. 2003. Performance-based selection of likelihood models for phylogeny estimation. Syst. Biol. 52:674 683.
-
(2003)
Syst. Biol.
, vol.52
, pp. 674-683
-
-
Minin, V.1
Abdo, Z.2
Joyce, P.3
Sullivan, J.4
-
29
-
-
1642553357
-
Neutralizing innate host defenses to control viral translation in Hsv-1 infected cells
-
Mohr, I. 2004. Neutralizing innate host defenses to control viral translation in Hsv-1 infected cells. Int. Rev. Immunol. 23:199 220.
-
(2004)
Int. Rev. Immunol.
, vol.23
, pp. 199-220
-
-
Mohr, I.1
-
30
-
-
24644491815
-
The effect of migration on local adaptation in a coevolving host-parasite system
-
Morgan, A.D., Gandon, S. Buckling, A. 2005. The effect of migration on local adaptation in a coevolving host-parasite system. Nature 437:253 256.
-
(2005)
Nature
, vol.437
, pp. 253-256
-
-
Morgan, A.D.1
Gandon, S.2
Buckling, A.3
-
31
-
-
33746214712
-
Resistance of mRNA translation to acute endoplasmic reticulum stress-inducing agents in herpes simplex virus type 1-infected cells requires multiple virus-encoded functions
-
Mulvey, M., Arias, C. Mohr, I. 2006. Resistance of mRNA translation to acute endoplasmic reticulum stress-inducing agents in herpes simplex virus type 1-infected cells requires multiple virus-encoded functions. J. Virol. 80:7354 7363.
-
(2006)
J. Virol.
, vol.80
, pp. 7354-7363
-
-
Mulvey, M.1
Arias, C.2
Mohr, I.3
-
33
-
-
0027533924
-
Evolution of the Zfx and Zfy genes: Rates and interdependence between the genes
-
Pamilo, P. Bianchi, N.O. 1993. Evolution of the Zfx and Zfy genes: rates and interdependence between the genes. Mol. Biol. Evol. 10:271 281.
-
(1993)
Mol. Biol. Evol.
, vol.10
, pp. 271-281
-
-
Pamilo, P.1
Bianchi, N.O.2
-
34
-
-
0036964355
-
New inferences from tree shape: Numbers of missing taxa and population growth rates
-
Pybus, O.G., Rambaut, A., Holmes, E.C. Harvey, P.H. 2002. New inferences from tree shape: numbers of missing taxa and population growth rates. Syst. Biol. 51:881 888.
-
(2002)
Syst. Biol.
, vol.51
, pp. 881-888
-
-
Pybus, O.G.1
Rambaut, A.2
Holmes, E.C.3
Harvey, P.H.4
-
35
-
-
33746483259
-
Emerging infectious disease as a proximate cause of amphibian mass mortality
-
Rachowicz, L.J., Knapp, R.A., Morgan, J.A.T., Stice, M.J., Vredenburg, V.T., Parker, J.M. Briggs, C.J. 2006. Emerging infectious disease as a proximate cause of amphibian mass mortality. Ecology 87:1671 1683.
-
(2006)
Ecology
, vol.87
, pp. 1671-1683
-
-
Rachowicz, L.J.1
Knapp, R.A.2
Morgan, J.A.T.3
Stice, M.J.4
Vredenburg, V.T.5
Parker, J.M.6
Briggs, C.J.7
-
36
-
-
33947144557
-
Polygenic traits and parasite local adaptation
-
Ridenhour, B.J. Nuismer, S.L. 2007. Polygenic traits and parasite local adaptation. Evolution 61:368 376.
-
(2007)
Evolution
, vol.61
, pp. 368-376
-
-
Ridenhour, B.J.1
Nuismer, S.L.2
-
37
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F. Huelsenbeck, J.P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572 1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
38
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 545. pp.
-
Sambrook, J., Fritsch, E.F. Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 545 pp.
-
(1989)
Molecular Cloning: A Laboratory Manual.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
39
-
-
33947357710
-
Inhibition of cellular 2′-5′ oligoadenylate synthetase by the herpes simplex virus type 1 Us11 protein.
-
Sanchez, R. Mohr, I. 2007. Inhibition of cellular 2′-5′ oligoadenylate synthetase by the herpes simplex virus type 1 Us11 protein. J. Virol. 81:3455 3464.
-
(2007)
J. Virol.
, vol.81
, pp. 3455-3464
-
-
Sanchez, R.1
Mohr, I.2
-
40
-
-
34848928803
-
Phylogenetic concordance analysis shows an emerging pathogen is novel and endemic
-
Storfer, A.T., Alfaro, M.E., Ridenhour, B.J., Jancovich, J.K., Mech, S.G., Parris, M.J. Collins, J.P. 2007. Phylogenetic concordance analysis shows an emerging pathogen is novel and endemic. Ecol. Lett. 10:1075 1083.
-
(2007)
Ecol. Lett.
, vol.10
, pp. 1075-1083
-
-
Storfer, A.T.1
Alfaro, M.E.2
Ridenhour, B.J.3
Jancovich, J.K.4
Mech, S.G.5
Parris, M.J.6
Collins, J.P.7
-
41
-
-
10044220678
-
Status and trends of amphibian declines and extinctions worldwide
-
Stuart, S.N., Chanson, J.S., Cox, N.A., Young, B.E., Rodrigues, A.S.L., Fischman, D.L. Waller, R.W. 2004. Status and trends of amphibian declines and extinctions worldwide. Science 306:1783 1786.
-
(2004)
Science
, vol.306
, pp. 1783-1786
-
-
Stuart, S.N.1
Chanson, J.S.2
Cox, N.A.3
Young, B.E.4
Rodrigues, A.S.L.5
Fischman, D.L.6
Waller, R.W.7
-
42
-
-
33750959091
-
Higher intensity of purifying selection on >90% of the human genes revealed by the intrinsic replacement mutation rates
-
Subramanian, S. Kumar, S. 2006. Higher intensity of purifying selection on >90% of the human genes revealed by the intrinsic replacement mutation rates. Mol. Biol. Evol. 23:2283 2287.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 2283-2287
-
-
Subramanian, S.1
Kumar, S.2
-
44
-
-
0027453388
-
Simple methods for testing the molecular evolutionary clock hypothesis
-
Tajima, F. 1993. Simple methods for testing the molecular evolutionary clock hypothesis. Genetics 135:599 607.
-
(1993)
Genetics
, vol.135
, pp. 599-607
-
-
Tajima, F.1
-
46
-
-
0031574072
-
The Clustal_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. Higgins, D.G. 1997. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876 4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
47
-
-
0036803223
-
Divergence time and evolutionary rate estimation with multilocus data
-
Thorne, J.L. Kishino, H. 2002. Divergence time and evolutionary rate estimation with multilocus data. Syst. Biol. 51:689 702.
-
(2002)
Syst. Biol.
, vol.51
, pp. 689-702
-
-
Thorne, J.L.1
Kishino, H.2
-
48
-
-
0031741182
-
Estimating the rate of evolution of the rate of molecular evolution
-
Thorne, J.L., Kishino, H. Painter, I.S. 1998. Estimating the rate of evolution of the rate of molecular evolution. Mol. Biol. Evol. 15:1647 1657.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1647-1657
-
-
Thorne, J.L.1
Kishino, H.2
Painter, I.S.3
|