-
1
-
-
0032889219
-
The genome of Melanoplus sanguinipes entomopoxvirus
-
Afonso, C. L., E. R. Tulman, Z. Lu, E. Oma, G. F. Kutish, and D. L. Rock. 1999. The genome of Melanoplus sanguinipes entomopoxvirus. J. Virol. 73:533-552.
-
(1999)
J. Virol.
, vol.73
, pp. 533-552
-
-
Afonso, C.L.1
Tulman, E.R.2
Lu, Z.3
Oma, E.4
Kutish, G.F.5
Rock, D.L.6
-
3
-
-
0028923063
-
Identification and characterization of a second putative origin of DNA replication in a baculovirus of Orgyia pseudotsugata
-
Ahrens, C. H., M. N. Pearson, and G. F. Rohrmann. 1995. Identification and characterization of a second putative origin of DNA replication in a baculovirus of Orgyia pseudotsugata. Virology 207:572-576.
-
(1995)
Virology
, vol.207
, pp. 572-576
-
-
Ahrens, C.H.1
Pearson, M.N.2
Rohrmann, G.F.3
-
4
-
-
0024988375
-
Protein database searches for multiple alignments
-
Altschul, S. F., and D. J. Lipman. 1990. Protein database searches for multiple alignments. Proc. Natl. Acad. Sci. USA 87:5509-5513.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 5509-5513
-
-
Altschul, S.F.1
Lipman, D.J.2
-
5
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Schaffer, A.A.2
Zhang, J.3
Zhang, Z.4
Miller, W.5
Lipman, D.J.6
-
6
-
-
14844290215
-
Structures of complete RNA polymerase II and its subcomplex, Rpb4/7
-
Armache, K. J., S. Mitterweger, A. Meinhart, and P. Cramer. 2005. Structures of complete RNA polymerase II and its subcomplex, Rpb4/7. J. Biol. Chem. 280:7131-7134.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 7131-7134
-
-
Armache, K.J.1
Mitterweger, S.2
Meinhart, A.3
Cramer, P.4
-
7
-
-
0038449224
-
Otubains: A new family of cysteine proteases in the ubiquitin pathway
-
Balakirev, M. Y., S. O. Tcherniuk, M. Jaquinod, and J. Chroboczek. 2003. Otubains: a new family of cysteine proteases in the ubiquitin pathway. EMBO Rep. 4:517-522.
-
(2003)
EMBO Rep.
, vol.4
, pp. 517-522
-
-
Balakirev, M.Y.1
Tcherniuk, S.O.2
Jaquinod, M.3
Chroboczek, J.4
-
8
-
-
0035252650
-
The Pif1 subfamily of helicases: Region-specific DNA helicases?
-
Bessler, J. B., J. Z. Torres, and V. A. Zakian. 2001. The Pif1 subfamily of helicases: region-specific DNA helicases? Trends Cell Biol. 11:60-65.
-
(2001)
Trends Cell Biol.
, vol.11
, pp. 60-65
-
-
Bessler, J.B.1
Torres, J.Z.2
Zakian, V.A.3
-
9
-
-
0041351954
-
Phylogenetic analysis and possible function of bro-like genes, a multigene family widespread among large double-stranded DNA viruses of invertebrates and bacteria
-
Bideshi, D. K., S. Renault, K. Stasiak, B. A. Federici, and Y. Bigot. 2003. Phylogenetic analysis and possible function of bro-like genes, a multigene family widespread among large double-stranded DNA viruses of invertebrates and bacteria. J. Gen. Virol. 84:2531-2544.
-
(2003)
J. Gen. Virol.
, vol.84
, pp. 2531-2544
-
-
Bideshi, D.K.1
Renault, S.2
Stasiak, K.3
Federici, B.A.4
Bigot, Y.5
-
10
-
-
0034528838
-
Characterization of repetitive DNA regions and methylated DNA in ascovirus genomes
-
Bigot, Y., K. Stasiak, F. Rouleux-Bonnin, and B. A. Federici. 2000. Characterization of repetitive DNA regions and methylated DNA in ascovirus genomes. J. Gen. Virol. 81:3073-3082.
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 3073-3082
-
-
Bigot, Y.1
Stasiak, K.2
Rouleux-Bonnin, F.3
Federici, B.A.4
-
11
-
-
4243824006
-
The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding
-
Bonaldi, T., G. Langst, R. Strohner, P. B. Becker, and M. E. Bianchi. 2003. The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding. EMBO J. 21:6865-6873.
-
(2003)
EMBO J.
, vol.21
, pp. 6865-6873
-
-
Bonaldi, T.1
Langst, G.2
Strohner, R.3
Becker, P.B.4
Bianchi, M.E.5
-
12
-
-
0036775490
-
Chemistry-based functional proteomics reveals novel members of the deubiquitinating enzyme family
-
Borodovsky, A., H. Ovaa, N. Kolli, T. Gan-Erdene, K. D. Wilkinson, H. L. Ploegh, and B. M. Kessler. 2002. Chemistry-based functional proteomics reveals novel members of the deubiquitinating enzyme family. Chem. Biol. 9:1149-1159.
-
(2002)
Chem. Biol.
, vol.9
, pp. 1149-1159
-
-
Borodovsky, A.1
Ovaa, H.2
Kolli, N.3
Gan-Erdene, T.4
Wilkinson, K.D.5
Ploegh, H.L.6
Kessler, B.M.7
-
13
-
-
0026520770
-
Methods and algorithms for statistical analysis of protein sequences
-
Brendel, V., P. Bucher, I. R. Nourbakhsh, B. E. Blaisdell, and S. Karlin. 1992. Methods and algorithms for statistical analysis of protein sequences. Proc. Natl. Acad. Sci. USA 89:2002-2006.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 2002-2006
-
-
Brendel, V.1
Bucher, P.2
Nourbakhsh, I.R.3
Blaisdell, B.E.4
Karlin, S.5
-
14
-
-
0017350932
-
An iridovirus from larvae of Culisetta annulata and Culex territans
-
Buchatsky, L. P. 1977. An iridovirus from larvae of Culisetta annulata and Culex territans. Acta Virol. 21:85-86.
-
(1977)
Acta Virol.
, vol.21
, pp. 85-86
-
-
Buchatsky, L.P.1
-
15
-
-
0025041267
-
Identification and characterization of the gene encoding the major structural protein of insect iridescent virus type 22
-
Cameron, I. R. 1990. Identification and characterization of the gene encoding the major structural protein of insect iridescent virus type 22. Virology 178:35-42.
-
(1990)
Virology
, vol.178
, pp. 35-42
-
-
Cameron, I.R.1
-
16
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17:540-552.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
17
-
-
33748672121
-
Additional mosquito hosts of the mosquito iridescent virus
-
Chapman, H. C., T. B. Clark, and D. B. Woodard. 1966. Additional mosquito hosts of the mosquito iridescent virus. J. Invertebr. Pathol. 8:545-546.
-
(1966)
J. Invertebr. Pathol.
, vol.8
, pp. 545-546
-
-
Chapman, H.C.1
Clark, T.B.2
Woodard, D.B.3
-
18
-
-
8544251268
-
Rpb4 and Rpb7: Subunits of RNA polymerase II and beyond
-
Choder, M. 2004. Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem. Sci. 29:674-681.
-
(2004)
Trends Biochem. Sci.
, vol.29
, pp. 674-681
-
-
Choder, M.1
-
19
-
-
0013824288
-
A mosquito iridescent virus (MIV) from Aedes taeniorhynchus (Wiedemann)
-
Clark, T. B., W. R. Kellen, and P. T. M. Lum. 1965. A mosquito iridescent virus (MIV) from Aedes taeniorhynchus (Wiedemann). J. Invertebr. Pathol. 7:519-521.
-
(1965)
J. Invertebr. Pathol.
, vol.7
, pp. 519-521
-
-
Clark, T.B.1
Kellen, W.R.2
Lum, P.T.M.3
-
20
-
-
0021760092
-
A comprehensive set of sequence analysis programs for the VAX
-
Devereux, J., P. Haeberly, and O. Smithies. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
-
(1984)
Nucleic Acids Res.
, vol.12
, pp. 387-395
-
-
Devereux, J.1
Haeberly, P.2
Smithies, O.3
-
21
-
-
25844480848
-
RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing
-
Djupedal, I., M. Portoso, H. Spahr, C. Bonilla, C. M. Gustafsson, R. C. Allshire, and K. Ekwall. 2005. RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing. Genes Dev. 19:2301-2306.
-
(2005)
Genes Dev.
, vol.19
, pp. 2301-2306
-
-
Djupedal, I.1
Portoso, M.2
Spahr, H.3
Bonilla, C.4
Gustafsson, C.M.5
Allshire, R.C.6
Ekwall, K.7
-
22
-
-
3142562526
-
Complete genomic DNA sequence of rock bream iridovirus
-
Do, J. W., C. H. Moon, H. J. Kim, M. S. Ko, S. B. Kim, J. H. Son, J. S. Kim, E. J. An, M. K. Kim, S. K. Lee, M. S. Han, S. J. Cha, M. S. Park, M. A. Park, Y. C. Kim, J. W. Kim, and J. W. Park. 2004. Complete genomic DNA sequence of rock bream iridovirus. Virology 325:351-363.
-
(2004)
Virology
, vol.325
, pp. 351-363
-
-
Do, J.W.1
Moon, C.H.2
Kim, H.J.3
Ko, M.S.4
Kim, S.B.5
Son, J.H.6
Kim, J.S.7
An, E.J.8
Kim, M.K.9
Lee, S.K.10
Han, M.S.11
Cha, S.J.12
Park, M.S.13
Park, M.A.14
Kim, Y.C.15
Kim, J.W.16
Park, J.W.17
-
23
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing, B., L. Hillier, M. C. Wendl, and P. Green. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8:175-185.
-
(1998)
Genome Res.
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
24
-
-
0000122573
-
PHYLIP-phylogeny inference package (version 3.2)
-
Felsenstein, J. 1989. PHYLIP-phylogeny inference package (version 3.2). Cladistics 5:164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
25
-
-
85007895151
-
A Chilo iridescent virus from the rice stem borer, Chilo suppresalis Walker (Lepidoptera:Pyralidae)
-
Fukaya, M., and S. Nasu. 1966. A Chilo iridescent virus from the rice stem borer, Chilo suppresalis Walker (Lepidoptera:Pyralidae). Appl. Entomol. Zool. 1:69.
-
(1966)
Appl. Entomol. Zool.
, vol.1
, pp. 69
-
-
Fukaya, M.1
Nasu, S.2
-
26
-
-
0030464460
-
SEAVIEW and PHYLO WIN: Two graphic tools for sequence alignment and molecular phylogeny
-
Galtier, N., M. Gouy, and C. Gautier. 1996. SEAVIEW and PHYLO WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput. Appl. Biol. Sci. 12:543-554.
-
(1996)
Comput. Appl. Biol. Sci.
, vol.12
, pp. 543-554
-
-
Galtier, N.1
Gouy, M.2
Gautier, C.3
-
27
-
-
6344287454
-
Interactions between BRCT repeats and phosphoproteins: Tangled up in two
-
Glover, J. N., R. S. Williams, and M. S. Lee. 2004. Interactions between BRCT repeats and phosphoproteins: tangled up in two. Trends Biochem. Sci. 29:579-585.
-
(2004)
Trends Biochem. Sci.
, vol.29
, pp. 579-585
-
-
Glover, J.N.1
Williams, R.S.2
Lee, M.S.3
-
28
-
-
0020174581
-
Frog virus 3 DNA replication occurs in two stages
-
Goorha, R. 1982. Frog virus 3 DNA replication occurs in two stages. J. Virol. 43:519-528.
-
(1982)
J. Virol.
, vol.43
, pp. 519-528
-
-
Goorha, R.1
-
29
-
-
0017855848
-
Macromolecular synthesis in cells infected by frog virus 3. VIII. The nucleus is a site of frog virus 3 DNA and RNA synthesis
-
Goorha, R., G. Murti, A. Granoff, and R. Tirey. 1978. Macromolecular synthesis in cells infected by frog virus 3. VIII. The nucleus is a site of frog virus 3 DNA and RNA synthesis. Virology 84:32-50.
-
(1978)
Virology
, vol.84
, pp. 32-50
-
-
Goorha, R.1
Murti, G.2
Granoff, A.3
Tirey, R.4
-
30
-
-
0020046318
-
The genome of frog virus 3, an animal DNA virus, is circularly permuted and terminally redundant
-
Goorha, R., and K. G. Murti. 1982. The genome of frog virus 3, an animal DNA virus, is circularly permuted and terminally redundant. Proc. Natl. Acad. Sci. USA 79:248-252.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 248-252
-
-
Goorha, R.1
Murti, K.G.2
-
31
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon, D., C. Abajian, and P. Green. 1998. Consed: a graphical tool for sequence finishing. Genome Res. 8:195-202.
-
(1998)
Genome Res.
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
32
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon, S., and O. Gascuel. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
33
-
-
0015090129
-
Pathology of a mosquito iridescent virus (MIV) infecting Aedes taeniorhynchus
-
Hall, D. W., and D. W. Anthony. 1971. Pathology of a mosquito iridescent virus (MIV) infecting Aedes taeniorhynchus. J. Invertebr. Pathol. 18:61-69.
-
(1971)
J. Invertebr. Pathol.
, vol.18
, pp. 61-69
-
-
Hall, D.W.1
Anthony, D.W.2
-
34
-
-
0035814498
-
Complete genomic analysis of the mandarin fish infectious spleen and kidney necrosis iridovirus
-
He, J. G., M. Deng, S. P. Weng, Z. Li, S. Y. Zhou, Q. X. Long, X. Z. Wang, and S.-M. Chan. 2001. Complete genomic analysis of the mandarin fish infectious spleen and kidney necrosis iridovirus. Virology 291:126-139.
-
(2001)
Virology
, vol.291
, pp. 126-139
-
-
He, J.G.1
Deng, M.2
Weng, S.P.3
Li, Z.4
Zhou, S.Y.5
Long, Q.X.6
Wang, X.Z.7
Chan, S.-M.8
-
35
-
-
0036056130
-
Sequence analysis of the complete genome of an iridovirus isolated from the tiger frog
-
He, J. G., L. Lu, M. Deng, H. H. He, S. P. Weng, X. H. Wang, S. Y. Zhou, Q. X. Long, X. Z. Wang, and S.-M. Chan. 2002. Sequence analysis of the complete genome of an iridovirus isolated from the tiger frog. Virology 292:185-197.
-
(2002)
Virology
, vol.292
, pp. 185-197
-
-
He, J.G.1
Lu, L.2
Deng, M.3
He, H.H.4
Weng, S.P.5
Wang, X.H.6
Zhou, S.Y.7
Long, Q.X.8
Wang, X.Z.9
Chan, S.-M.10
-
37
-
-
0025241235
-
Molecular cloning and characterization of a late Tipula iridescent virus gene
-
Home, W. A., S. Tajbakhsh, and V. L. Seligy. 1990. Molecular cloning and characterization of a late Tipula iridescent virus gene. Gene 94:243-248.
-
(1990)
Gene
, vol.94
, pp. 243-248
-
-
Home, W.A.1
Tajbakhsh, S.2
Seligy, V.L.3
-
38
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang, X., and A. Madan. 1999. CAP3: a DNA sequence assembly program. Genome Res. 9:868-877.
-
(1999)
Genome Res.
, vol.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
39
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck, J. P., and F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
40
-
-
17944395486
-
Extensive domain shuffling in transcription regulators of DNA viruses and implications for the origin of fungal APSES transcription factors
-
RESEARCH 0012.10012.11. [Online.]
-
Iyer, L. M., E. V. Koonin, and L. Aravind. 2002. Extensive domain shuffling in transcription regulators of DNA viruses and implications for the origin of fungal APSES transcription factors. Genome Biol. 3:RESEARCH 0012.10012.11. [Online.] http://genomebiology.com/2002/3/3/RESEARCH/0012.
-
(2002)
Genome Biol.
, vol.3
-
-
Iyer, L.M.1
Koonin, E.V.2
Aravind, L.3
-
41
-
-
0036455077
-
Molecular anatomy of Chilo iridescent virus genome and the evolution of viral genes
-
Jakob, N. J., and G. Darai. 2002. Molecular anatomy of Chilo iridescent virus genome and the evolution of viral genes. Virus Genes 25:299-316.
-
(2002)
Virus Genes
, vol.25
, pp. 299-316
-
-
Jakob, N.J.1
Darai, G.2
-
42
-
-
0035919712
-
Analysis of the first complete DNA sequence of an invertebrate iridovirus: Coding strategy of the genome of Chilo iridescent virus
-
Jakob, N. J., K. Muller, U. Bahr, and G. Darai. 2001. Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus. Virology 286:182-196.
-
(2001)
Virology
, vol.286
, pp. 182-196
-
-
Jakob, N.J.1
Muller, K.2
Bahr, U.3
Darai, G.4
-
43
-
-
0242352467
-
Genomic sequence of a ranavirus (family Iridoviridae) associated with salamander mortalities in North America
-
Jancovich, J. K., J. Mao, V. G. Chinchar, C. Wyatt, S. T. Case, S. Kumar, G. Valente, S. Subramanian, E. W. Davidson, J. P. Collins, and B. L. Jacobs. 2003. Genomic sequence of a ranavirus (family Iridoviridae) associated with salamander mortalities in North America. Virology 316:90-103.
-
(2003)
Virology
, vol.316
, pp. 90-103
-
-
Jancovich, J.K.1
Mao, J.2
Chinchar, V.G.3
Wyatt, C.4
Case, S.T.5
Kumar, S.6
Valente, G.7
Subramanian, S.8
Davidson, E.W.9
Collins, J.P.10
Jacobs, B.L.11
-
44
-
-
0028211273
-
A model recognition approach to the prediction of all-helical membrane protein structure and topology
-
Jones, D. T., W. R. Taylor, and J. M. Thornton. 1994. A model recognition approach to the prediction of all-helical membrane protein structure and topology. Biochemistry 33:3038-3049.
-
(1994)
Biochemistry
, vol.33
, pp. 3038-3049
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
45
-
-
0032750418
-
Characterization of baculovirus repeated open reading frames (bro) in Bombyx mori nucleopolyhedrovirus
-
Kang, W., M. Suzuli, Z. Evgueni, K. Okano, and S. Maeda. 1999. Characterization of baculovirus repeated open reading frames (bro) in Bombyx mori nucleopolyhedrovirus. J. Virol. 73:10339-10345.
-
(1999)
J. Virol.
, vol.73
, pp. 10339-10345
-
-
Kang, W.1
Suzuli, M.2
Evgueni, Z.3
Okano, K.4
Maeda, S.5
-
46
-
-
0025286897
-
Role of DNA replication in vaccinia virus gene expression: A naked template is required for transcription of three late trans-activator genes
-
Keck, J. G., C. J. Baldick, and B. Moss. 1990. Role of DNA replication in vaccinia virus gene expression: a naked template is required for transcription of three late trans-activator genes. Cell 61:801-809.
-
(1990)
Cell
, vol.61
, pp. 801-809
-
-
Keck, J.G.1
Baldick, C.J.2
Moss, B.3
-
47
-
-
0018304857
-
A small iridescent virus (type 29) isolated from Tenebro molitor: A comparison of its proteins and antigens with six other iridescent viruses
-
Kelly, D. C., M. D. Ayres, T. Lescott, J. S. Robertson, and G. M. Happ. 1979. A small iridescent virus (type 29) isolated from Tenebro molitor: a comparison of its proteins and antigens with six other iridescent viruses. J. Gen. Virol. 42:95.
-
(1979)
J. Gen. Virol.
, vol.42
, pp. 95
-
-
Kelly, D.C.1
Ayres, M.D.2
Lescott, T.3
Robertson, J.S.4
Happ, G.M.5
-
48
-
-
0028618183
-
Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA
-
Krishna, T. S., X.-P. Kong, S. Gary, P. M. Burgers, and J. Kuriyan. 1994. Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA. Cell 79:1233-1243.
-
(1994)
Cell
, vol.79
, pp. 1233-1243
-
-
Krishna, T.S.1
Kong, X.-P.2
Gary, S.3
Burgers, P.M.4
Kuriyan, J.5
-
49
-
-
29244447181
-
Kalign-an accurate and fast multiple sequence alignment algorithm
-
Lassmann, T., and E. L. Sonnhammer. 2005. Kalign-an accurate and fast multiple sequence alignment algorithm. BMC Bioinformatics 6:298.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 298
-
-
Lassmann, T.1
Sonnhammer, E.L.2
-
50
-
-
0034629090
-
Topoisomerase II from Chlorella virus PBCV-1
-
Lavrukhin, O. V., J. M. Fortune, T. G. Wood, D. E. Burbank, J. L. Van Etten, N. Osheroff, and S. Lloyd. 2000. Topoisomerase II from Chlorella virus PBCV-1. J. Biol. Chem. 275:6915-6921.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 6915-6921
-
-
Lavrukhin, O.V.1
Fortune, J.M.2
Wood, T.G.3
Burbank, D.E.4
Van Etten, J.L.5
Osheroff, N.6
Lloyd, S.7
-
51
-
-
0014337061
-
Transmission of mosquito iridescent virus in Aedes taeniorhynchus. I. Laboratory experiments
-
Linley, J. R., and H. T. Nielsen. 1968. Transmission of mosquito iridescent virus in Aedes taeniorhynchus. I. Laboratory experiments. J. Invertebr. Pathol. 12:7-16.
-
(1968)
J. Invertebr. Pathol.
, vol.12
, pp. 7-16
-
-
Linley, J.R.1
Nielsen, H.T.2
-
52
-
-
0014336909
-
Transmission of mosquito iridescent virus in Aedes taeniorhynchus. II. Experiments related to transmission in nature
-
Linley, J. R., and H. T. Nielsen. 1968. Transmission of mosquito iridescent virus in Aedes taeniorhynchus. II. Experiments related to transmission in nature. J. Invertebr. Pathol. 12:17-24.
-
(1968)
J. Invertebr. Pathol.
, vol.12
, pp. 17-24
-
-
Linley, J.R.1
Nielsen, H.T.2
-
53
-
-
23244440498
-
Complete genome sequence analysis of an iridovirus isolated from the orange-spotted grouper, Epinephelus coiodes
-
Lu, L., S. Y. Zhou, C. Chen, S. P. Weng, S.-M. Chan, and J. G. He. 2005. Complete genome sequence analysis of an iridovirus isolated from the orange-spotted grouper, Epinephelus coiodes. Virology 339:81-100.
-
(2005)
Virology
, vol.339
, pp. 81-100
-
-
Lu, L.1
Zhou, S.Y.2
Chen, C.3
Weng, S.P.4
Chan, S.-M.5
He, J.G.6
-
54
-
-
0033974998
-
A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae
-
Marakova, K. S., L. Aravind, and E. V. Kooning. 2000. A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae. Trends Biochem. Sci. 25:50-52.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 50-52
-
-
Marakova, K.S.1
Aravind, L.2
Kooning, E.V.3
-
55
-
-
0033057745
-
Sublethal effects of iridovirus disease in a mosquito
-
Marina, C. F., J. I. Arredondo-Jimenez, A. Castillo, and T. Williams. 1999. Sublethal effects of iridovirus disease in a mosquito. Oecologia 119:383-388.
-
(1999)
Oecologia
, vol.119
, pp. 383-388
-
-
Marina, C.F.1
Arredondo-Jimenez, J.I.2
Castillo, A.3
Williams, T.4
-
56
-
-
0027412632
-
Rpb7, one of two dissociable subunits of yeast RNA polymerase II, is essential for cell viability
-
McKune, K., K. L. Richards, A. M. Edwards, R. A. Young, and N. A. Woychik. 1993. Rpb7, one of two dissociable subunits of yeast RNA polymerase II, is essential for cell viability. Yeast 9:295-299.
-
(1993)
Yeast
, vol.9
, pp. 295-299
-
-
McKune, K.1
Richards, K.L.2
Edwards, A.M.3
Young, R.A.4
Woychik, N.A.5
-
57
-
-
0033158746
-
The MutT motif family of nucleotide phosphohydrolases in man and human pathogens
-
McLennan, A. G. 1999. The MutT motif family of nucleotide phosphohydrolases in man and human pathogens. Int. J. Mol. Med. 4:79-89.
-
(1999)
Int. J. Mol. Med.
, vol.4
, pp. 79-89
-
-
McLennan, A.G.1
-
58
-
-
0025028791
-
Comparison of the genomes of two sympatric iridescent viruses (types 9 and 16)
-
McMillan, N. A., S. Davison, and J. Kalmakoff. 1990. Comparison of the genomes of two sympatric iridescent viruses (types 9 and 16). Arch. Virol. 114:277-284.
-
(1990)
Arch. Virol.
, vol.114
, pp. 277-284
-
-
McMillan, N.A.1
Davison, S.2
Kalmakoff, J.3
-
59
-
-
0028360089
-
RNA transcript mapping of the Wiseana iridescent virus genome
-
McMillan, N. A., and J. Kalmakoff. 1994. RNA transcript mapping of the Wiseana iridescent virus genome. Virus Res. 32:343-352.
-
(1994)
Virus Res.
, vol.32
, pp. 343-352
-
-
McMillan, N.A.1
Kalmakoff, J.2
-
60
-
-
3042660431
-
The inhibitor of apoptosis protein family (IAPs): An emerging therapeutic target in cancer
-
Nachmias, B., Y. Ashhab, and D. Ben-Yehuda. 2004. The inhibitor of apoptosis protein family (IAPs): an emerging therapeutic target in cancer. Semin. Cancer Biol. 14:231-243.
-
(2004)
Semin. Cancer Biol.
, vol.14
, pp. 231-243
-
-
Nachmias, B.1
Ashhab, Y.2
Ben-Yehuda, D.3
-
61
-
-
0032972509
-
PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization
-
Nakai, K., and P. Horton. 1999. PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization. Trends Biochem. Sci. 24:34-36.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 34-36
-
-
Nakai, K.1
Horton, P.2
-
62
-
-
3543134126
-
Matrix metalloproteinases as modulators of inflammation and innate immunity
-
Parks, W. C., C. L. Wilson, and Y. S. Lopez-Boado. 2004. Matrix metalloproteinases as modulators of inflammation and innate immunity. Nat. Rev. 4:617-629.
-
(2004)
Nat. Rev.
, vol.4
, pp. 617-629
-
-
Parks, W.C.1
Wilson, C.L.2
Lopez-Boado, Y.S.3
-
63
-
-
0025272240
-
Rapid and sensitive sequence comparison with FASTP and FASTA
-
Pearson, W. R. 1990. Rapid and sensitive sequence comparison with FASTP and FASTA. Methods Enzymol. 183:63-98.
-
(1990)
Methods Enzymol.
, vol.183
, pp. 63-98
-
-
Pearson, W.R.1
-
64
-
-
0032518163
-
Microbial gene identification using interpolated Markov models
-
Salzberg, S. L., A. L. Delcher, S. Kasif, and O. White. 1998. Microbial gene identification using interpolated Markov models. Nucleic Acids Res. 26:544-548.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 544-548
-
-
Salzberg, S.L.1
Delcher, A.L.2
Kasif, S.3
White, O.4
-
66
-
-
0036205377
-
TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt, H. A., K. Strimmer, M. Vingron, and A. von Haeseler. 2002. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18:502-504.
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
Von Haeseler, A.4
-
67
-
-
0032889316
-
Down regulation of gene expression by the vaccinia virus D10 protein
-
Shors, T., J. G. Keck, and B. Moss. 1999. Down regulation of gene expression by the vaccinia virus D10 protein. J. Virol. 73:791-796.
-
(1999)
J. Virol.
, vol.73
, pp. 791-796
-
-
Shors, T.1
Keck, J.G.2
Moss, B.3
-
68
-
-
0029044301
-
The arterivirus Nsp2 protease. An unusual cysteine protease with primary structure similarities to both papain-like and chymotrypsin-like proteases
-
Snijder, E. J., A. L. Wassenaar, W. J. Spaan, and A. E. Gorbalenya. 1995. The arterivirus Nsp2 protease. An unusual cysteine protease with primary structure similarities to both papain-like and chymotrypsin-like proteases. J. Biol. Chem. 270:16671-16676.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 16671-16676
-
-
Snijder, E.J.1
Wassenaar, A.L.2
Spaan, W.J.3
Gorbalenya, A.E.4
-
69
-
-
7644238614
-
Functional genomics analysis of Singapore grouper iridovirus: Complete sequence determination and proteomic analysis
-
Song, W. J., Q. W. Qin, J. Qiu, C. H. Huang, F. Wang, and C. L. Hew. 2004. Functional genomics analysis of Singapore grouper iridovirus: complete sequence determination and proteomic analysis. J. Virol. 78:12576-12590.
-
(2004)
J. Virol.
, vol.78
, pp. 12576-12590
-
-
Song, W.J.1
Qin, Q.W.2
Qiu, J.3
Huang, C.H.4
Wang, F.5
Hew, C.L.6
-
70
-
-
0031813130
-
Pfam: Multiple sequence alignments and HMM-profiles of protein domains
-
Sonnhammer, E. L., S. R. Eddy, E. Birney, A. Bateman, and R. Durbin. 1998. Pfam: multiple sequence alignments and HMM-profiles of protein domains. Nucleic Acids Res. 26:320-322.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 320-322
-
-
Sonnhammer, E.L.1
Eddy, S.R.2
Birney, E.3
Bateman, A.4
Durbin, R.5
-
71
-
-
0034532497
-
Phylogenetic position of the DpAV-4a ascovirus DNA polymerase among viruses with a large double-stranded DNA genome
-
Stasiak, K., M.-V. Demattei, B. A. Federici, and Y. Bigot. 2000. Phylogenetic position of the DpAV-4a ascovirus DNA polymerase among viruses with a large double-stranded DNA genome. J. Gen. Virol. 81:3059-3072.
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 3059-3072
-
-
Stasiak, K.1
Demattei, M.-V.2
Federici, B.A.3
Bigot, Y.4
-
72
-
-
20444489707
-
DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment
-
Subramanian, A. R., J. Weyer-Menkhoff, M. Kaufmann, and B. Morgenstern. 2005. DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment. BMC Bioinformatics 6:66.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 66
-
-
Subramanian, A.R.1
Weyer-Menkhoff, J.2
Kaufmann, M.3
Morgenstern, B.4
-
73
-
-
2542454676
-
Comparative genomic analysis of frog virus 3, type species of the genus Ranavirus (family Iridoviridae)
-
Tan, W. G. H., T. J. Barkman, V. G. Chinchar, and K. Essani. 2004. Comparative genomic analysis of frog virus 3, type species of the genus Ranavirus (family Iridoviridae). Virology 323:70-84.
-
(2004)
Virology
, vol.323
, pp. 70-84
-
-
Tan, W.G.H.1
Barkman, T.J.2
Chinchar, V.G.3
Essani, K.4
-
74
-
-
0026559320
-
Tandemly repeated sequence at the 3′ end of the IE-2 gene of the baculovirus Orgyia pseudotsugata multicapsid nuclear polyhedrosis virus is an enhancer element
-
Theilmann, D. A., and S. Stewart. 1992. Tandemly repeated sequence at the 3′ end of the IE-2 gene of the baculovirus Orgyia pseudotsugata multicapsid nuclear polyhedrosis virus is an enhancer element. Virology 187:97-106.
-
(1992)
Virology
, vol.187
, pp. 97-106
-
-
Theilmann, D.A.1
Stewart, S.2
-
75
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
76
-
-
0031005423
-
The complete DNA sequence of lymphocystis disease virus
-
Tidona, C. A., and G. Darai. 1997. The complete DNA sequence of lymphocystis disease virus. Virology 230:207-216.
-
(1997)
Virology
, vol.230
, pp. 207-216
-
-
Tidona, C.A.1
Darai, G.2
-
77
-
-
0035930324
-
Structure of an archeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex
-
Todone, F., P. Brick, F. Werner, R. O. J. Weinziert, and S. Onesti. 2001. Structure of an archeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex. Mol. Cell 8:1137-1143.
-
(2001)
Mol. Cell
, vol.8
, pp. 1137-1143
-
-
Todone, F.1
Brick, P.2
Werner, F.3
Weinziert, R.O.J.4
Onesti, S.5
-
78
-
-
13444270445
-
Complete genomic sequence of the grouper iridovirus and comparison of genomic organization with those of other iridoviruses
-
Tsai, C.-T., J.-W. Ting, M.-H. Wu, M.-F. Wu, I.-C. Guo, and C.-Y. Chang. 2005. Complete genomic sequence of the grouper iridovirus and comparison of genomic organization with those of other iridoviruses. J. Virol. 79:2010-2023.
-
(2005)
J. Virol.
, vol.79
, pp. 2010-2023
-
-
Tsai, C.-T.1
Ting, J.-W.2
Wu, M.-H.3
Wu, M.-F.4
Guo, I.-C.5
Chang, C.-Y.6
-
79
-
-
4644315656
-
Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism
-
Ueda, K., A. Yamashita, J. Ishikawa, M. Shimada, T. O. Watsuji, Morimura, H. Ikeda, M. Hattori, and T. Beppu. 2004. Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism. Nucleic Acids Res. 32:4937-4944.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4937-4944
-
-
Ueda, K.1
Yamashita, A.2
Ishikawa, J.3
Shimada, M.4
Watsuji, T.O.5
Morimura6
Ikeda, H.7
Hattori, M.8
Beppu, T.9
-
80
-
-
0028398609
-
Effects of host resistance and injury on the susceptibility of Aedes taeniorhynchus to mosquito iridescent virus
-
Undeen, A. H., and T. Fukuda. 1994. Effects of host resistance and injury on the susceptibility of Aedes taeniorhynchus to mosquito iridescent virus. J. Am. Mosq. Control Assoc. 10:64-66.
-
(1994)
J. Am. Mosq. Control Assoc.
, vol.10
, pp. 64-66
-
-
Undeen, A.H.1
Fukuda, T.2
-
81
-
-
0025025442
-
The cystein switch: A principle of regulation of metalloproteinase activity with potential applicability to the entire matrix metalloproteinase gene family
-
Van Wart, H. E., and H. Birkedal-Hansen. 1990. The cystein switch: a principle of regulation of metalloproteinase activity with potential applicability to the entire matrix metalloproteinase gene family. Proc. Natl. Acad. Sci. USA 87:5578-5582.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 5578-5582
-
-
Van Wart, H.E.1
Birkedal-Hansen, H.2
-
82
-
-
0017707245
-
A comparison of the DNA of R and T strains of mosquito iridescent virus
-
Wagner, G. W., and J. D. Paschke. 1977. A comparison of the DNA of R and T strains of mosquito iridescent virus. Virology 81:298-308.
-
(1977)
Virology
, vol.81
, pp. 298-308
-
-
Wagner, G.W.1
Paschke, J.D.2
-
83
-
-
0344736781
-
Cladistic analysis of iridoviruses based on protein and DNA sequences
-
Wang, J. W., R. Q. Deng, X. Z. Wang, Y. S. Huang, K. Xing, J. H. Feng, J. G. He, and Q. X. Long. 2003. Cladistic analysis of iridoviruses based on protein and DNA sequences. Arch. Virol. 148:2181-2194.
-
(2003)
Arch. Virol.
, vol.148
, pp. 2181-2194
-
-
Wang, J.W.1
Deng, R.Q.2
Wang, X.Z.3
Huang, Y.S.4
Xing, K.5
Feng, J.H.6
He, J.G.7
Long, Q.X.8
-
84
-
-
0031789556
-
Sequence comparison of the major capsid protein gene from 18 diverse iridoviruses
-
Webby, R. J., and J. Kalmakoff. 1998. Sequence comparison of the major capsid protein gene from 18 diverse iridoviruses. Arch. Virol. 143:1949-1966.
-
(1998)
Arch. Virol.
, vol.143
, pp. 1949-1966
-
-
Webby, R.J.1
Kalmakoff, J.2
-
85
-
-
0035853771
-
Direct interaction between the subunit RAP30 of transcription factor HF (TFIIF) and RNA polymerase subunit 5, which contributes to the association between TFIIF and RNA polymerase II
-
Wei, W., D. Dorjsuren, Y. Lin, W. Qin, T. Nomura, N. Hayashi, and S. Murakami. 2001. Direct interaction between the subunit RAP30 of transcription factor HF (TFIIF) and RNA polymerase subunit 5, which contributes to the association between TFIIF and RNA polymerase II. J. Biol. Chem. 276:12266-12273.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 12266-12273
-
-
Wei, W.1
Dorjsuren, D.2
Lin, Y.3
Qin, W.4
Nomura, T.5
Hayashi, N.6
Murakami, S.7
-
86
-
-
3943054838
-
De-ubiquitination and ubiquitin ligase domains of A20 down-regulate NF-κB signalling
-
Wertz, I. E., K. M. O'Rourke, H. Zhou, M. Eby, L. Aravind, S. Seshagiri, P. Wu, C. Wiesmann, R. Baker, D. L. Boone, A. Ma, E. V. Koonin, and V. M. Dixit. 2004. De-ubiquitination and ubiquitin ligase domains of A20 down-regulate NF-κB signalling. Nature 430:694-699.
-
(2004)
Nature
, vol.430
, pp. 694-699
-
-
Wertz, I.E.1
O'Rourke, K.M.2
Zhou, H.3
Eby, M.4
Aravind, L.5
Seshagiri, S.6
Wu, P.7
Wiesmann, C.8
Baker, R.9
Boone, D.L.10
Ma, A.11
Koonin, E.V.12
Dixit, V.M.13
-
87
-
-
0021443534
-
Extraction of viral DNA from erythrocytes of swine with acute African swine fever
-
Wesley, R. D., J. C. Quintero, and C. A. Mebus. 1984. Extraction of viral DNA from erythrocytes of swine with acute African swine fever. Am. J. Vet. Res. 45:1127-1131.
-
(1984)
Am. J. Vet. Res.
, vol.45
, pp. 1127-1131
-
-
Wesley, R.D.1
Quintero, J.C.2
Mebus, C.A.3
-
88
-
-
0027992460
-
Comparative studies of iridoviruses: Further support for a new classification
-
Williams, T. 1994. Comparative studies of iridoviruses: further support for a new classification. Virus Res. 33:99-121.
-
(1994)
Virus Res.
, vol.33
, pp. 99-121
-
-
Williams, T.1
-
90
-
-
0030021332
-
The iridoviruses
-
Williams, T. 1996. The iridoviruses. Adv. Virus Res. 46:345-412.
-
(1996)
Adv. Virus Res.
, vol.46
, pp. 345-412
-
-
Williams, T.1
-
91
-
-
0028275924
-
Proposals for a new classification of iridescent viruses
-
Williams, T., and J. S. Cory. 1994. Proposals for a new classification of iridescent viruses. J. Gen. Virol. 75:1291-1301.
-
(1994)
J. Gen. Virol.
, vol.75
, pp. 1291-1301
-
-
Williams, T.1
Cory, J.S.2
-
92
-
-
0022379385
-
Trans activation of an immediate-early frog virus 3 promoter by a virion protein
-
Willis, D. B., and A. Granoff. 1985. Trans activation of an immediate-early frog virus 3 promoter by a virion protein. J. Virol. 56:495-501.
-
(1985)
J. Virol.
, vol.56
, pp. 495-501
-
-
Willis, D.B.1
Granoff, A.2
-
93
-
-
0014315606
-
Laboratory studies with the mosquito iridescent virus (MIV)
-
Woodard, D. B., and H. C. Chapman. 1968. Laboratory studies with the mosquito iridescent virus (MIV). J. Invertebr. Pathol. 11:296-301.
-
(1968)
J. Invertebr. Pathol.
, vol.11
, pp. 296-301
-
-
Woodard, D.B.1
Chapman, H.C.2
-
94
-
-
0000424606
-
A second virus disease of the leather jacket, Tipula paludosa
-
Xeros, N. 1954. A second virus disease of the leather jacket, Tipula paludosa. Nature 174:562.
-
(1954)
Nature
, vol.174
, pp. 562
-
-
Xeros, N.1
-
95
-
-
0033974652
-
Structure and assembly of large lipid-containing dsDNA viruses
-
Yan, X., N. H. Olson, J. L. Van Etten, M. Bergoin, M. G. Rossmann, and T. S. Baker. 2000. Structure and assembly of large lipid-containing dsDNA viruses. Nat. Struct. Biol. 7:101-103.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 101-103
-
-
Yan, X.1
Olson, N.H.2
Van Etten, J.L.3
Bergoin, M.4
Rossmann, M.G.5
Baker, T.S.6
-
96
-
-
0038168110
-
A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5
-
Yeo, M., P. S. Lin, M. E. Dahmus, and G. N. Gill. 2003. A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J. Biol. Chem. 278:26078-26085.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 26078-26085
-
-
Yeo, M.1
Lin, P.S.2
Dahmus, M.E.3
Gill, G.N.4
-
97
-
-
0033928201
-
Evidence for nucleic acid binding ability and nucleosome association of Bombyx mon nucleopolyhedrovirus BRO proteins
-
Zemskov, E. A., W. Kang, and S. Maeda. 2000. Evidence for nucleic acid binding ability and nucleosome association of Bombyx mon nucleopolyhedrovirus BRO proteins. J. Virol. 74:6784-6789.
-
(2000)
J. Virol.
, vol.74
, pp. 6784-6789
-
-
Zemskov, E.A.1
Kang, W.2
Maeda, S.3
-
98
-
-
2942635075
-
Complete genomic sequence of lymphocystis disease virus isolated from China
-
Zhang, Q.-Y., F. Xiao, J. Xie, Z.-Q. Li, and J.-F. Gui. 2004. Complete genomic sequence of lymphocystis disease virus isolated from China. J. Virol. 78:6982-6994.
-
(2004)
J. Virol.
, vol.78
, pp. 6982-6994
-
-
Zhang, Q.-Y.1
Xiao, F.2
Xie, J.3
Li, Z.-Q.4
Gui, J.-F.5
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