Genetic networks of cooperative redox regulation of osteopontin

Matrix Biology

Volumn 27, Issue 5, 2008, Pages 462-474

  Partridge, C R ^a,b   He, Q ^a   Brun, M ^a   Ramos, K S ^a  

^a UNIVERSITY OF LOUISVILLE   (United States)

^b University of Louisville School of Medicine   (United States)

Author keywords

Computational prediction; NF kappa B; Osteopontin; Oxidative stress; TGF 1

Indexed keywords

ALGORITHMS; ANIMALS; ANTIOXIDANTS; ARGINASE; CELLS, CULTURED; COMPUTATIONAL BIOLOGY; DNA-BINDING PROTEINS; EXPRESSED SEQUENCE TAGS; GALECTIN 3; GENE EXPRESSION REGULATION; GENE REGULATORY NETWORKS; HYDROGEN PEROXIDE; MICE; MUSCLE, SMOOTH, VASCULAR; MUTAGENESIS, SITE-DIRECTED; MYOCYTES, SMOOTH MUSCLE; NF-KAPPA B; OSTEOPONTIN; OXIDATION-REDUCTION; PROMOTER REGIONS (GENETICS); RATS; RESPONSE ELEMENTS; SEQUENCE DELETION; TRANSCRIPTION FACTORS; TRANSFECTION; TRANSFORMING GROWTH FACTOR BETA1;

MURINAE;

EID: 45049085983     PISSN: 0945053X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.matbio.2008.01.009     Document Type: Article

References (58)

1. Acosta-Rodríguez E.V., Montes C.L., Motrán C.C., Zuniga E.I., Liu F.T., Rabinovich G.A., and Gruppi A. Galectin-3 mediates IL-4-induced survival and differentiation of B cells: functional cross-talk and implications during Trypanosoma cruzi infection. Journal of Immunology 172 (2004) 493-502
2. Ashkar S., Weber G.F., Panoutsakopoulou V., Sanchirico M.E., Jansson M., Zawaideh S., Rittling S.R., Denhardt D.T., Glimcher M.J., and Cantor H. Eta-1 (osteopontin): an early component of type-1 (cell-mediated) immunity. Science 287 (2000) 860-864
3. Beinke S., and Ley S.C. Functions of NF-kappaB1 and NF-kappaB2 in immune cell biology. Biochemical Journal 382 Pt 2 (2004) 393-409
4. Berhane B.T., Zong C., Liem D.A., Huang A., Le S., Edmondson R.D., Jones R.C., Qiao X., Whitelegge J.P., Ping P., and Vondriska T.M. Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project pilot phase. Proteomics 5 13 (2005) 3520-3530
5. Bolstad B.M., Irizarry R.A., Astrand M., and Speed T.P. A comparison of normalization methods for high density oligonucleotide array data based on bias and variance. Bioinformatics 19 2 (2003) 185-193
6. Bradford M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 72 (1976) 248-254
7. Brazier S.P., Mason H.S., Bateson A.N., and Kemp P.J. Cloning of the human TASK-2 (KCNK5) promoter and its regulation by chronic hypoxia. Biochemical and Biophysical Research Communications 336 (2005) 1251-1258
8. Carystinos G.D., Kandouz M., Alaoui-Jamali M.A., and Batist G. Unexpected induction of the human connexin 43 promoter by the Ras signaling pathway is mediated by a novel putative promoter sequence. Molecular Pharmacology 63 4 (2003) 821-831
9. Chabas D. Osteopontin, a multi-faceted molecule. Medical Science (Paris) 21 10 (2005) 832-838
10. Ckless K., Vliet A., and Heininger Y.J. Oxidative-nitrosative stress and post-translational protein modifications: implications to lung structure-function relations. Arginase modulates NF-kappaB activity via a nitric oxide-dependent mechanism. American Journal of Respiratory Cell and Molecular Biology 36 6 (2007) 645-653
11. Cook T., and Urrutia R. TIEG proteins join the Smads as TGF-beta-regulated transcription factors that control pancreatic cell growth. American Journal of Physiology: Gastrointestinal and Liver Physiology 278 4 (2000) G513-G521
12. Cook T., Gebelein B., Mesa K., Mladek A., and Urrutia R. Molecular cloning and characterization of TIEG2 reveals a new subfamily of transforming growth factor-beta-inducible Sp1-like zinc finger-encoding genes involved in the regulation of cell growth. Journal of Biological Chemistry 273 40 (1998) 25929-25936
13. Cook T., Gebelein B., Belal M., Mesa K., and Urrutia R. Three conserved transcriptional repressor domains are a defining feature of the TIEG subfamily of Sp1-like zinc finger proteins. Journal of Biological Chemistry 274 41 (1999) 29500-29504
14. Daftarian P.M., Kurnar A., Kryworchko M., and Diaz-Mitoma F. IL-10 production is enhanced in human T cells by IL-12 and IL-6 and in monocytes by tumor necrosis factor-alpha. Journal of Immunology 157 (1996) 12-20
15. Durante W., Liao L., Reyna S.V., Peyton K.J., and Schafer A.I. Transforming growth factor-b1 stimulates l-arginine transport and metabolism in vascular smooth muscle cells: role in polyamine and collagen synthesis. Circulation 103 8 (2001) 1121-1127
16. Geissinger E., Weisser C., Fischer P., Schart M., and Wellbrock C. Autocrine stimulation by osteopontin contributes to antiapoptotic signalling of melanocytes in dermal collagen. Cancer Research 62 (2002) 4820-4828
17. Grohe C., Kahlert S., Loebbert K., Stimpel M., Karas R.H., Vetter H., and Neyses L. Cardiac myocytes and fibroblasts contain functional estrogen receptors. FEBS Letter 416 (1997) 107-112
18. Harris-White M.E., and Frautschy S.A. Low density lipoprotein receptor-related proteins (LRPs), Alzheimer's and cognition. Current Drug Targets. CNS and Neurological Disorder 4 5 (2005) 469-480
19. Hedges S.R., Bjarnadottir M., Agace W., Hang L., and Svanborg C. Immunoregulatory cytokines modify Escherichia coli induced uroepithelial cell IL-6 and IL-8 responses. Cytokine 8 (1996) 686-697
20. Hesse M., Modolell M., Flamme A.C., Schito M., Fuentes J.M., Cheever A.W., Pearce E.J., and Wynn T.A. Differential regulation of nitric oxide synthase-2 and arginase-1 by type 1/type 2 cytokines in vivo: granulomatous pathology is shaped by the pattern of l-arginine metabolism1. Journal of Immunology 167 (2001) 6533-6544
21. Hsieh T.J., Chen R., Zhang S.L., Liu F., Brezniceanu M.L., Whiteside C.I., Fantus I.G., Ingelfinger J.R., Hamet, P., and Chan J.S.D. Upregulation of osteopontin gene expression in diabetic rat proximal tubular cells revealed by microarray profiling. Kidney International 69 (2006) 1005-1015
22. Irby R.B., Mc Carthy S.M., and Yeatman T.J. Osteopontin regulates multiple functions contributing to human colon cancer development and progression. Clinical & Experimental Metastasis 21 6 (2004) 515-523
23. Isoda K., Nishikawa K., Kamezawa Y., Yoshida M., Kusuhara M., Moroi M., Tada N., and Ohsuzu F. Osteopontin plays an important role in the development of medial thickening and neointimal formation. Circulation Research 91 1 (2002) 77-82
24. Johnson C.D., Balagurunathan Y., Tadesse M.G., Falahatpisheh M.H., Brun M., Walker M.K., Dougherty E.R., and Ramos K.S. Unraveling gene-gene interactions regulated by ligands of the aryl hydrocarbon receptor. Environmental Health Perspectives. Toxicogenomics 112 4 (2004) 403-412
25. Lai C.F., Seshadri V., Huang K., Shao J.S., Cai J., Vattikuti R., Schumacher A., Loewy A.P., Denhardt D.T., Rittling S.R., and Towler D.A. An osteopontin-NADPH oxidase signaling cascade promotes pro-matrix metalloproteinase 9 activation in aortic mesenchymal cells. Circulation Research 98 12 (2006) 1479-1489
26. Leborgne L., Pakala R., Dilcher C., Hellinga D., Seabron R., Tio F.O., and Waksman R. Effect of Antioxidants on atherosclerotic plaque formation in balloon-denuded and irradiated hypercholesterolemic rabbits. Journal of Cardiovascular Pharmacology 46 4 (2005) 540-547
27. Lee K.W., Chun K.S., Lee J.S., Kang K.S., Surh Y.J., and Lee H.J. Inhibition of cyclooxygenase-2 expression and restoration of gap junction intercellular communication in H-ras-transformed rat liver epithelial cells by caffeic acid phenethyl ester. Annals of the New York Academy of Science 1030 (2004) 501-507
28. Lo J.C., Basak S., James E.S., Quiambo R., Kinsella M.C., Alegre M.L., Weih F., Franzoso G., Hoffmann A., and Fu Y.X. Coordination between NF-kappaB family members p50 and p52 is essential for mediating LTbetaR signals in the development and organization of secondary lymphoid tissues. Blood 107 3 (2005) 1048-1055
29. Matemba S.F., Lie A., and Ransjo M. Regulation of osteoclastogenesis by gap junction communication. Journal of Cellular Biochemistry 99 (2006) 528-537
30. Matsui Y., Rittling S.R., Okamoto H., Inobe M., Jia N., Shimizu T., Akino M., Sugawara T., Morimoto J., Kimura C., Kon S., Denhardt D., Kitabatake A., and Uede T. Osteopontin deficiency attenuates atherosclerosis in female apolipoprotein E-deficient mice. Arteriosclerosis, Thrombosis, and Vascular Biology 23 6 (2003) 1029-1034
31. Modolell M., Corraliza I., Link F., Soler G., and Eichmann K. Reciprocal regulation of the nitric oxide synthase/arginase balance in mouse bone marrowderived macrophages by TH1 and TH2 cytokines. European Journal of Immunology 25 (1995) 1101
32. Munder M., Eichmann K., Moran J.M., Centeno F., Soler G., and Modolell M. Th1/Th2-regulated expression of arginase isoforms in murine macrophages and dendritic cells. Journal of Immunology. 163 (1999) 3771
33. Noda M., Yoon K., Prince C.W., Butler W.T., and Rodan G.A. Transcriptional regulation of osteopontin production in rat osteosarcoma cells by type,6 transforming growth factor. Journal of Biological Chemistry 263 27 (1988) 13916-13921
34. Ou X.M., Chen K., and Shih J.C. Dual functions of transcription factors, transforming growth factor-beta-inducible early gene (TIEG)2 and Sp3, are mediated by CACCC element and Sp1 sites of human monoamine oxidase (MAO) B gene. Journal of Biological Chemistry 279 20 (2004) 21021-21028
35. Partridge C.R., Williams E.S., Barhoumi R., Tadesse M.G., Johnson C.D., Lu K.P., Meininger G.A., Wilson E., and Ramos K.S. Novel genomic targets in oxidant-induced vascular injury. Journal of Molecular and Cellular Cardiology 38 (2005) 983-996
36. Pelzer T., De Jager T., Muck J., Stimpel M., and Neyses L. Scientific Conference on Molecular, Cellular and Integrated Physiological Approaches to the Failing Heart, Snowbird (1999), UT Press, USA
37. Philip S., and Kundu G.C. Osteopontin induces nuclear factor kappa B-mediated promatrix metalloproteinase-2 activation through I kappa B alpha /IKK signaling pathways, and curcumin (diferulolylmethane) down-regulates these pathways. Journal of Biological Chemistry 278 16 (2003) 14487-14497
38. Rama A., Matsushita T., Charolidi N., Rothery S., Dupont E., and Severs N.J. Up-regulation of connexin43 correlates with increased synthetic activity and enhanced contractile differentiation in TGF-β-treated human aortic smooth muscle cells. European Journal of Cell Biology 85 (2006) 375-386
39. Ramos K.S. Redox regulation of c-Ha-ras and osteopontin signaling in vascular smooth muscle cells: implications in chemical atherogenesis. Annual Review of Pharmacology and Toxicology 39 (1999) 243-265
40. Ramos K.S., He Q., Kalbfleisch T., Montoya-Durango D.E., Teneng I., Stribinskis V., and Brun M. Computational and biological inference of gene regulatory networks of the LINE-1 retrotransposon. Genomics 90 (2007) 176-185
41. Rittling S.R., and Chambers A.F. Role of osteopontin in tumour progression. British Journal of Cancer 90 10 (2004) 1877-1881
42. Singh U., Devaraj S., Jialal I., and Vitamin E. Oxidative stress, and inflammation. Annual Review of Nutrition 25 (2005) 151-174
43. Skayian Y., and Kreydiyyeh S.I. Tumor necrosis factor alpha alters Na+-K+ ATPase activity in rat cardiac myocytes: involvement of NF-κB, AP-1 and PGE2. Life Sciences 80 (2006) 173-180
44. Sonoki T., Nagasaki A., Gotoh T., Takiguchi M., Takeya M., Matsuzaki H., and Mori M. Coinduction of nitric-oxide synthase and arginase I in cultured rat peritoneal macrophages and rat tissues in vivo by lipopolysaccharide. Journal of Biological Chemistry 272 6 (1997) 3689-3693
45. Strom A., Franzen A., Wangnerud C., Knutsson A.K., Heinegard D., and Hultgardh-Nilsson A. Altered vascular remodeling in osteopontin-deficient atherosclerotic mice. Journal of Vascular Research 41 4 (2004) 314-322
46. Subramaniam M., Harris S.A., Oursler M.J., Rasmussen K., Riggs B.L., and Spelsberg T.C. Identification of a novel TGF-beta-regulated gene encoding a putative zinc finger protein in human osteoblasts. Nucleic Acids Research 23 23 (1995) 4907-4912
47. Subramaniam M., Gorny G., Johnsen S.A., Monroe D.G., Evans G.L., Fraser D.G., Rickard D.J., Rasmussen K., van Deursen J.M., Turner R.T., Oursler M.J., and Spelsberg T.C. TIEG1 null mouse-derived osteoblasts are defective in mineralization and in support of osteoclast differentiation in vitro. Molecular and Cellular Biology 25 3 (2005) 1191-1199
48. Tachibana I., Imoto M., Adjei P.N., Gores G.J., Subramaniam M., Spelsberg T.C., and Urrutia R. Overexpression of the TGFbeta-regulated zinc finger encoding gene, TIEG, induces apoptosis in pancreatic epithelial cells. Journal of Clinical Investigation 99 10 (1997) 2365-2374
49. Thackaberry E.A., Jiang Z., Johnson C.D., Ramos K.S., and Walker M.K. Toxicogenomic profile of 2,3,7,8-tetrachlorodibenzo-p-dioxin in the murine fetal heart: modulation of cell cycle and extracellular matrix genes. Toxicological Sciences 88 1 (2005) 231-241
50. Tian J.Y., Sørensen E.S., Butler W.T., Lopez C.A., Sy M.S., Desai N.K., and Denhardt D.T. Regulation of no synthesis induced by inflammatory mediators in RAW264.7 cells: collagen prevents inhibition by osteopontin. Cytokine 12 5 (2000) 450-457
51. Umegaki N., Tamai K., Nakano H., Moritsugu R., Yamazaki T., Hanada K., Katayama I., and Kaneda Y. Differential regulation of karyopherin alpha 2 expression by TGF-beta1 and IFN-gamma in normal human epidermal keratinocytes: evident contribution of KPNA2 for nuclear translocation of IRF-1. Journal of Investigative Dermatology 127 (2007) 1456-1464
52. Urashima M., Ogata A., Chauhan D., Hatziyanni M., Vidriales M.B., Dedera D.A., Schlossman R.L., and Anderson K.C. Transforming growth factor-P 1: differential effects on multiple myeloma versus normal B cells. Blood 87 5 (1996) 1928-1938
53. Vermes C., Roebuck K.A., Chandrasekaran R., Dobai J.G., Jacobs J.J., and Glant T.T. Particulate wear debris activates protein tyrosine kinases and nuclear factor kappaB, which down-regulates type I collagen synthesis in human osteoblasts. Journal of Bone and Mineral Research 15 9 (2000) 1756-1765
54. Vivanco F., Martin-Ventura J.L., Duran M.C., Barderas M.G., Blanco-Colio L., Darde V.M., Mas S., Meilhac O., Michel J.B., Tunon J., and Egido J. Quest for novel cardiovascular biomarkers by proteomic analysis. Journal of Proteome Research 4 4 (2005) 1181-1191
55. Wai P.Y., Mi Z.Y., Gao C., Guo H., Marroquin C., and Kuo P.C. Ets-1 and Runx2 regulate transcription of a metastatic gene, osteopontin, in murine colorectal cancer cells. Journal of Biological Chemistry 281 (2006) 18973-18982
56. Wang Z., Peters B., Klussmann S., Bender H., Herb A., and Krieglstein K. Gene structure and evolution of Tieg3, a new member of the Tieg family of proteins. Gene 325 (2004) 25-34
57. Witte M.B., Barbul A., Schick M.A., Vogt N., and Becker H.D. Upregulation of arginase expression in wound-derived fibroblasts. Journal of Surgical Research 105 (2002) 35-42
58. Zeitz O., Maass A.E., Nguyen P.V., Hensmann G., Kögler H., Möller K., Hasenfuss G., and Paul M.L. Janssen hydroxyl radical-induced acute diastolic dysfunction is due to calcium overload via reverse-mode Na(+)-Ca(2+) exchange. Circulation Research 90 (2002) 988