Discrimination of six Pratylenchus species using PCR and species-specific primers

Journal of Nematology

Volumn 36, Issue 2, 2004, Pages 142-146

  Al Banna, L ^a,b   Ploeg, A T ^a   Williamson, V M ^c   Kaloshian, I ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF JORDAN   (Jordan)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

D3 26S rDNA; Diagnostic; PCR; Pratylenchus; Species specific primers

Indexed keywords

PRATYLENCHUS;

EID: 4444313986     PISSN: 0022300X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (28)

1. Al-Barma, L., V. Williamson, and S. L. Gardner. 1997. Phylogenetic analysis of nematodes of the genus Pratylenchus using nuclear 26 S rDNA. Molecular Phylogenetics and Evolution 7:94-102.
2. Baldridge, G. D., N. R. O'Neill, and D. A. Samac. 1998. Alfalfa (Medicago sativa L.) resistance to the root-lesion nematode, Pratylenchus penetrans: Defense-response gene mRNA and isoflavonoid phytoalexin levels in roots. Plant Molecular Biology 38:999-1010.
3. Café Filho, A. C., and C. S. Huang. 1989. Description of Pratylenchus pseudofallax n. sp. with a key to species of the genus Pratylenchus filipjev, 1936 (Nematoda: Pratylenchidae). Revue de Nématologie 12:7-16.
4. Doucet, M., J. Pinochet, and J. A. Di Rienzo. 1996. Comparative analysis of morphological and morphometrical characters in six isolates of Pratylenchus vulnus Allen & Jemen, 1951 (Nemata: Tylenchida). Fundamental and Applied Nematology 19:79-84.
5. Doucet, M. E., P. Lax, and J. Pinochet. 1998. Variability of some external characters in Pratylenchus vulnus Allen & Jensen, 1951 (Nematoda; Tylenchida). Fundamental and Applied Nematology 21:205-206.
6. Doucet, M., P. Lax, J. A. Di Rienzo, J. Pinochet, and P. Baujard. 2001. Temperature-induced morphometrical variability in an isolate of Pratylenchus vulnus Allen & Jensen, 1951 (Nematoda; Tylenchida). Nematology 3:1-8.
7. Gao, X., H. Cheng, and C. Fang. 1999. New diagnostic characters for Pratylenchus vulnus. Nematologia Mediterranea 27:9-13.
8. Hafez, S. L., D. Miller, and P. Sundararaj. 2000. Screening of alfalfa cultivars to the lesion nematode Pratylenchus penetrans for commercial release. Nematologia Mediterranea 28:157-161.
9. Handoo, Z. A., and A. M. Golden. 1989. A key and diagnostic compendium to the species of the genus Pratylenchus filipjev, 1936 (lesion nematodes). Journal of Nematology 21:202-218.
10. Huettel, R. N., and R. V. Rebois. 1985. Culturing plant-parasitic nematodes using root explants. Pp. 155-158 in B. M. Zuckermann, W. F. May, and M. B. Harrison, eds. Plant nematology laboratory manual. Amherst, MA: Agricultural Experiment Station, University of Massachusetts.
11. rd edition. San Francisco, CA: W. H. Freeman.
12. Loof, P. A. A. 1978. The genus Pratylenchus filipjev, 1936 (Nematoda: Pratylenchidae): A review of its anatomy, morphology, distribution, systematics, and identification. Research Information Center. Swedish University of Agricultural Sciences. Uppsala, Sweden.
13. McKenry, M. V., and P.A. Roberts. 1985. Phytonematology study guide. Publication No. 4045. Cooperative Extension, University of California. Division of Agricultural and Natural Resources. Oakland.
14. Niblack, T. L., and R. S. Hussey. 1985. Extracting nematodes from soil and plant tissue. Pp. 201-206 in B. M. Zuckermann, W. F. May, and M. B. Harrison, eds. Plant Nematology Laboratory Manual. Amherst, MA: Agricultural Experiment Station, University of Massachusetts.
15. O'Bannon, J. H., and L. Taylor. 1968. Migratory endoparasitic nematodes reared on carrot discs. Phytopathology 58:385.
16. Oliveira, O. C., M. A. Vallim, C. P. Semighini, W. L., Araujo, G. H. Goldman, and M. A. Machado. 2002. Quantification of Xylella fastidiosa from citrus trees by real-time polymerase chain reaction assay. Phytopathology 92:1048-1054.
17. Orui, Y. 1996. Discrimination of the main Pratylenchus species (Nematoda; Pratylenchidae) in Japan by PCR-RFLP analysis. Applied Entomology and Zoology 31:505-514.
18. Powers, T. O., and T. S. Harris. 1993. A polymerase chain reaction method for identification of five major Meloidogyne species. Journal of Nematology 25:1-6.
19. Roos, M. H., and W. N. Grant. 1993. Species-specific PCR for the parasitic nematodes Haemonchus contorus and Trichostrongylus colubriformus. International Journal of Parasitology 23:419-421.
20. Schaad, N. W., Y. Berthier-Schaad, A. Sechler, and D. Knorr. 1999. Detection of Clavibacter michiganensis subsp. sepedonicus in potato tubers by BIO-PCR and an automated real-time fluorescence detection system. Plant Disease 83:1095-1100.
21. Schneider, J. H. M., J. J. S'Jacob, and P. A. van de Pol. 1995. Rosa multiflora 'Ludiek', a rootstock with resistant features to the root lesion nematode Pratylenchus vulnus. Scientia Horticulturae 63:37-45.
22. Seinhorst, J. W. 1959. A rapid method for the transfer of nematodes from fixation to anhydrous glycerin. Nematologica 4:67-69.
23. Siddiqui, I. A., S. A. Sher, and A. M. French. 1973. Distribution of plant-parasitic nematodes in California. Sacramento, CA: State of California Department of Food and Agriculture.
24. Townshend, J. L. 1991. Morphological observations of Pratylenchus penetrans from celery and strawberry in southern Ontario. Journal of Nematology 23:205-209.
25. Uehara, T., T. Mizukubo, A. Kushida, and Y. Momota. 1998. Identification of Pratylenchus coffeae and P. loosi using specific primers for PCR amplification of ribosomal DNA. Nematologica 44:357-368.
26. Uehara, T., A. Kushida, and Y. Momota. 1999. Rapid and sensitive identification of Pratylenchus spp. using reverse dot blot hybridization. Nematology 1:549-555.
27. Waeyenberge, L., A. Ryss, M. Moens, J. Pinochet, and T. C. Vrain. 2000. Molecular characterization of 18 Pratylenchus species using rDNA restriction fragment length polymorphism. Nematology 2:135-142.
28. Williamson, V. M., E. P. Caswell-Chen, B. B. Westerdahl, F. F. Wu, and G. Caryl. 1997. A PCR assay to identify and distinguish single juveniles of Meloidogyne hapla and M. chitwoodi. Journal of Nematology 29:9-15.