-
2
-
-
0037264009
-
Electrostatic interactions
-
P. E. Boume and H. Weissing, editors. Wiley-Liss, Hoboken, NJ
-
Baker, N. A., and J. A. McCammon. 2003. Electrostatic interactions. In Structural Bioinformatics. P. E. Boume and H. Weissing, editors. Wiley-Liss, Hoboken, NJ. 427-440.
-
(2003)
Structural Bioinformatics
, pp. 427-440
-
-
Baker, N.A.1
McCammon, J.A.2
-
3
-
-
84986452939
-
The fast multipole boundary element method for molecular electrostatics: An optimal approach for large systems
-
Bharadwaj, R., A. Windemuth, S. Sridharan, B. Honig, and A. Nicholls. 1995. The fast multipole boundary element method for molecular electrostatics: an optimal approach for large systems. J. Comput. Chem. 16:898-913.
-
(1995)
J. Comput. Chem.
, vol.16
, pp. 898-913
-
-
Bharadwaj, R.1
Windemuth, A.2
Sridharan, S.3
Honig, B.4
Nicholls, A.5
-
4
-
-
0037328258
-
Boundary element solution of the linear Poisson-Boltzmann equation and a multipole method for the rapid calculation of forces on macromolecules in solution
-
Bordner, A. J., and G. A. Huber. 2003. Boundary element solution of the linear Poisson-Boltzmann equation and a multipole method for the rapid calculation of forces on macromolecules in solution. J. Comput. Chem. 24:353-367.
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 353-367
-
-
Bordner, A.J.1
Huber, G.A.2
-
5
-
-
4444376373
-
The role of solvent permittivity in electrostatic interactions in proteins
-
F. T. Hong, editor. Plenum Press, New York, NY
-
Buravtsev, V. N., P. I. Lazarev, V. S. Sivozhelezov, and A. I. Rubinstein. 1989. The role of solvent permittivity in electrostatic interactions in proteins. In Molecular Electronics: Biosensors and Biocomputers. F. T. Hong, editor. Plenum Press, New York, NY. 97-104.
-
(1989)
Molecular Electronics: Biosensors and Biocomputers
, pp. 97-104
-
-
Buravtsev, V.N.1
Lazarev, P.I.2
Sivozhelezov, V.S.3
Rubinstein, A.I.4
-
6
-
-
0015414319
-
Phenomenological theory of polar systems
-
Dogonadze, R. R., and A. A. Kornyshev. 1972. Phenomenological theory of polar systems. Phys. Stat. Sol. 53:439-450.
-
(1972)
Phys. Stat. Sol.
, vol.53
, pp. 439-450
-
-
Dogonadze, R.R.1
Kornyshev, A.A.2
-
7
-
-
0039553312
-
Polar solvent structure in the theory of ionic solvation
-
Dogonadze, R. R., and A. A. Kornyshev. 1974. Polar solvent structure in the theory of ionic solvation. J. Chem. Soc. Faraday Trans. 70: 1121-1132.
-
(1974)
J. Chem. Soc. Faraday Trans.
, vol.70
, pp. 1121-1132
-
-
Dogonadze, R.R.1
Kornyshev, A.A.2
-
8
-
-
4444295955
-
Aspects of electrodynamics of electrochemical systems
-
Dogonadze, R. R., A. A. Kornyshev, A. M. Kuznetsov, and T. A. Marsagishvili. 1977. Aspects of electrodynamics of electrochemical systems. J. Phys. (Paris). 38:35-48.
-
(1977)
J. Phys. (Paris)
, vol.38
, pp. 35-48
-
-
Dogonadze, R.R.1
Kornyshev, A.A.2
Kuznetsov, A.M.3
Marsagishvili, T.A.4
-
9
-
-
0004039485
-
Theoretical approaches to solvation
-
R. R. Dogonadze, E. Kaiman, A, A. Komyshev, and J. Ulstrup, editors. Elsevier, Amsterdam, The Netherlands
-
Dogonadze, R. R., A. A. Kornyshev, and J. Ulstrup. 1985. Theoretical approaches to solvation. In The Chemical Physics of Solvation. R. R. Dogonadze, E. Kaiman, A, A. Komyshev, and J. Ulstrup, editors. Elsevier, Amsterdam, The Netherlands. 3-35.
-
(1985)
The Chemical Physics of Solvation
, pp. 3-35
-
-
Dogonadze, R.R.1
Kornyshev, A.A.2
Ulstrup, J.3
-
10
-
-
0034759640
-
Molecular mechanisms of protein-protein recognision: Whether the surface placed charged residues determine the recognision process
-
Drozdov-Tikhomirov, L. D., D. M. Linde, V. V. Poroikov, A. A. Alexandrov, and G. I. Skurida. 2001. Molecular mechanisms of protein-protein recognision: whether the surface placed charged residues determine the recognision process. J. Biomol. Struct. Dyn. 19:279-284.
-
(2001)
J. Biomol. Struct. Dyn.
, vol.19
, pp. 279-284
-
-
Drozdov-Tikhomirov, L.D.1
Linde, D.M.2
Poroikov, V.V.3
Alexandrov, A.A.4
Skurida, G.I.5
-
11
-
-
0033850087
-
High apparent dielectric constants in the interior of a protein reflect water penetration
-
Dwyer, J. J., A. G. Gittis, D. A. Karp, E. E. Lattman, D. S. Spencer, W. E. Stiles, and E. B. Garcia-Moreno. 2000. High apparent dielectric constants in the interior of a protein reflect water penetration. Biophys. J. 79:1610-1620.
-
(2000)
Biophys. J.
, vol.79
, pp. 1610-1620
-
-
Dwyer, J.J.1
Gittis, A.G.2
Karp, D.A.3
Lattman, E.E.4
Spencer, D.S.5
Stiles, W.E.6
Garcia-Moreno, E.B.7
-
12
-
-
0032500555
-
Solvation, reorganization energy, and biological catalysis
-
Cannon, W. R., and S. J. Benkovic. 1998. Solvation, reorganization energy, and biological catalysis. J. Biol. Chem. 273:26257-26260.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 26257-26260
-
-
Cannon, W.R.1
Benkovic, S.J.2
-
13
-
-
0024566409
-
Role of arginin-38 in regulation of the cytochrome c oxidation-reduction equilibrium
-
Cutler, R. L., A. M. Davies, S. Creighton, A. Warshel, G. R. Moore, M. Smith, and A. G. Mauk. 1989. Role of arginin-38 in regulation of the cytochrome c oxidation-reduction equilibrium. Biochemistry. 28: 3188-3197.
-
(1989)
Biochemistry
, vol.28
, pp. 3188-3197
-
-
Cutler, R.L.1
Davies, A.M.2
Creighton, S.3
Warshel, A.4
Moore, G.R.5
Smith, M.6
Mauk, A.G.7
-
14
-
-
0020861687
-
Water and proteins. II. The location and dynamics of water in proteins and its relation to their stability and properties
-
Edsall, J. T., and H. A. McKenzie. 1983. Water and proteins. II. The location and dynamics of water in proteins and its relation to their stability and properties. Adv. Biophys. 16:53-183.
-
(1983)
Adv. Biophys.
, vol.16
, pp. 53-183
-
-
Edsall, J.T.1
McKenzie, H.A.2
-
16
-
-
0029066848
-
Theory of electrostatic interactions in macromolecules
-
Gilson, M. K. 1995. Theory of electrostatic interactions in macromolecules. Curr. Opin. Struct. Biol. 5:216-223.
-
(1995)
Curr. Opin. Struct. Biol.
, vol.5
, pp. 216-223
-
-
Gilson, M.K.1
-
17
-
-
0022816745
-
The dielectric constant of a folded protein
-
Gilson, M. K., and B. H. Honig. 1986. The dielectric constant of a folded protein. Biopolymers. 25:2097-2119.
-
(1986)
Biopolymers
, vol.25
, pp. 2097-2119
-
-
Gilson, M.K.1
Honig, B.H.2
-
18
-
-
0023899747
-
Energetics of charge-charge interactions in proteins
-
Gilson, M. K., and B. H. Honig. 1988. Energetics of charge-charge interactions in proteins. Proteins. 3:32-52.
-
(1988)
Proteins
, vol.3
, pp. 32-52
-
-
Gilson, M.K.1
Honig, B.H.2
-
19
-
-
0021813940
-
On the calculation of electrostatic interactions in proteins
-
Gilson, M. K., A. Rashin, R. Fine, and B. Honig. 1985. On the calculation of electrostatic interactions in proteins. J. Mol. Biol. 183:503-516.
-
(1985)
J. Mol. Biol.
, vol.183
, pp. 503-516
-
-
Gilson, M.K.1
Rashin, A.2
Fine, R.3
Honig, B.4
-
21
-
-
0036533445
-
A critical analysis of continuum electrostatics: The screened Coulomb potential-implicit solvent model and the study of the alanine dipeptide and discrimination of misfolded structures of proteins
-
Hassan, S. A., and E. L. Mehler. 2002. A critical analysis of continuum electrostatics: the screened Coulomb potential-implicit solvent model and the study of the alanine dipeptide and discrimination of misfolded structures of proteins. Proteins. 47:45-61.
-
(2002)
Proteins
, vol.47
, pp. 45-61
-
-
Hassan, S.A.1
Mehler, E.L.2
-
23
-
-
0028204490
-
Do salt bridges stabilize proteins? A continuum electrostatic analysis
-
Hendsch, Z. S., and B. Tidor. 1994. Do salt bridges stabilize proteins? A continuum electrostatic analysis. Protein Sci. 3:211-226.
-
(1994)
Protein Sci.
, vol.3
, pp. 211-226
-
-
Hendsch, Z.S.1
Tidor, B.2
-
24
-
-
0001747704
-
Response of metal surfaces to static and moving point charges and to polarizable charge distributions
-
Heinrichs, J. 1973. Response of metal surfaces to static and moving point charges and to polarizable charge distributions. Phys. Rev. B. 8:1346-1364.
-
(1973)
Phys. Rev. B
, vol.8
, pp. 1346-1364
-
-
Heinrichs, J.1
-
25
-
-
84990406847
-
Dielectric effects in biopolymers: The theory of ionic saturation revisited
-
Hingerty, B. E., T. L. Ferrell, and J. E. Turner. 1985. Dielectric effects in biopolymers: the theory of ionic saturation revisited. Biopolymers. 24:427-439.
-
(1985)
Biopolymers
, vol.24
, pp. 427-439
-
-
Hingerty, B.E.1
Ferrell, T.L.2
Turner, J.E.3
-
26
-
-
0029016182
-
Classical electrostatics in biology and chemistry
-
Honig, B., and A. J. Nicholls. 1995. Classical electrostatics in biology and chemistry. Science. 268:1144-1149.
-
(1995)
Science
, vol.268
, pp. 1144-1149
-
-
Honig, B.1
Nicholls, A.J.2
-
28
-
-
0022964504
-
Focusing of electric fields in the active site of Cu, Zn Superoxide dismutase. I
-
Klapper, R., R. Hagstrom, K. Fine, K. Sharp, and B. Honig. 1986. Focusing of electric fields in the active site of Cu, Zn Superoxide dismutase. I. Proteins. 1:47-79.
-
(1986)
Proteins
, vol.1
, pp. 47-79
-
-
Klapper, R.1
Hagstrom, R.2
Fine, K.3
Sharp, K.4
Honig, B.5
-
29
-
-
0019397257
-
Nonlocal screening of ions in a structurized polar liquid - New aspects of solvent description in electrolyte theory
-
Kornyshev, A. A. 1981. Nonlocal screening of ions in a structurized polar liquid - new aspects of solvent description in electrolyte theory. Electrochim. Acta. 26:1-20.
-
(1981)
Electrochim. Acta
, vol.26
, pp. 1-20
-
-
Kornyshev, A.A.1
-
30
-
-
0002952471
-
Nonlocal electrostatics of solvations
-
R. R. Dogonadze, E. Kalman, A. A. Kornyshev, and J. Ulstrup, editors. Elsevier, Amsterdam, The Netherlands
-
Kornyshev, A. A. 1985. Nonlocal electrostatics of solvations. In The Chemical Physics of Solvation, Part A. R. R. Dogonadze, E. Kalman, A. A. Kornyshev, and J. Ulstrup, editors. Elsevier, Amsterdam, The Netherlands. 77-118.
-
(1985)
The Chemical Physics of Solvation, Part A
, pp. 77-118
-
-
Kornyshev, A.A.1
-
31
-
-
0035896663
-
Sequence recognition in the pairing of DNA duplexes
-
Kornyshev, A. A., and S. Leikin. 2001. Sequence recognition in the pairing of DNA duplexes. Phys. Rev. Lett. 86:366-369.
-
(2001)
Phys. Rev. Lett.
, vol.86
, pp. 366-369
-
-
Kornyshev, A.A.1
Leikin, S.2
-
34
-
-
0344115788
-
Electrochemical Interfaces
-
A. J. Bard, M. Stratmann, and G. S. Frankel, editors. Wiley-VCH, New York, NY
-
Kornyshev, A. A., A. Spohr, and M. A. Vorotyntsev. 2002. Electrochemical Interfaces. In Encyclopedia of Electrochemistry, Vol. 1. A. J. Bard, M. Stratmann, and G. S. Frankel, editors. Wiley-VCH, New York, NY.
-
(2002)
Encyclopedia of Electrochemistry
, vol.1
-
-
Kornyshev, A.A.1
Spohr, A.2
Vorotyntsev, M.A.3
-
35
-
-
0001226011
-
The shape of nonlocal dielectric function of polar liquids and the implications for thermodynamic properties of electrolytes
-
Kornyshev, A. A., and G. Sutmann. 1996. The shape of nonlocal dielectric function of polar liquids and the implications for thermodynamic properties of electrolytes. J. Chem. Phys. 104:1524-1544.
-
(1996)
J. Chem. Phys.
, vol.104
, pp. 1524-1544
-
-
Kornyshev, A.A.1
Sutmann, G.2
-
36
-
-
0007801093
-
Polar solvent structural parameters from protonation equilibria of aliphatic and alicyclic diamines and from absorption bands of mixed-valence transition-metal complexes
-
Kornyshev, A. A., and J. Ulstrup. 1986. Polar solvent structural parameters from protonation equilibria of aliphatic and alicyclic diamines and from absorption bands of mixed-valence transition-metal complexes. Chem. Phys. Lett. 126:74-80.
-
(1986)
Chem. Phys. Lett.
, vol.126
, pp. 74-80
-
-
Kornyshev, A.A.1
Ulstrup, J.2
-
37
-
-
0021579156
-
On the evaluation of standard Gibbs energies of ion transfer between two solvents
-
Kornyshev, A. A., and A. G. Volkov. 1984. On the evaluation of standard Gibbs energies of ion transfer between two solvents. J. Electroanal. Chem. 180:363-381.
-
(1984)
J. Electroanal. Chem.
, vol.180
, pp. 363-381
-
-
Kornyshev, A.A.1
Volkov, A.G.2
-
38
-
-
0043162266
-
Nonlocal electrostatic approach to the double layer and adsorption at the electrode-electrolyte interface
-
Kornyshev, A. A., and M. A. Vorotyntsev. 1980. Nonlocal electrostatic approach to the double layer and adsorption at the electrode-electrolyte interface. Surf. Sci. 101:23-48.
-
(1980)
Surf. Sci.
, vol.101
, pp. 23-48
-
-
Kornyshev, A.A.1
Vorotyntsev, M.A.2
-
39
-
-
0007155342
-
Non-local screening effects in the long-range interionic interaction in a polar solvent
-
Kornyshev, A. A., M. A. Vorotyntsev, A. Nielsen, and J. Ulstrup. 1982. Non-local screening effects in the long-range interionic interaction in a polar solvent. J. Chem. Soc. Faraday Trans. 78:217-241.
-
(1982)
J. Chem. Soc. Faraday Trans.
, vol.78
, pp. 217-241
-
-
Kornyshev, A.A.1
Vorotyntsev, M.A.2
Nielsen, A.3
Ulstrup, J.4
-
40
-
-
0034691755
-
Effects of medium polarization and pre-existing field on activation energy of enzymatic charge-transfer reactions
-
Krishtalik, L. I., and V. V. Topolev. 2000. Effects of medium polarization and pre-existing field on activation energy of enzymatic charge-transfer reactions. Biochim. Biophys. Acta. 1459:88-105.
-
(2000)
Biochim. Biophys. Acta
, vol.1459
, pp. 88-105
-
-
Krishtalik, L.I.1
Topolev, V.V.2
-
41
-
-
0036708467
-
Relationship between ion pair geometries and electrostatic strengths in proteins
-
Kumar, S., and R. Nussinov. 2002a. Relationship between ion pair geometries and electrostatic strengths in proteins. Biophys. J. 83:1595-1612.
-
(2002)
Biophys. J.
, vol.83
, pp. 1595-1612
-
-
Kumar, S.1
Nussinov, R.2
-
42
-
-
0036902235
-
Close range electrostatic interactions in proteins
-
Kumar, S., and R. Nussinov. 2002b. Close range electrostatic interactions in proteins. Chembiochem. 3:604-617.
-
(2002)
Chembiochem.
, vol.3
, pp. 604-617
-
-
Kumar, S.1
Nussinov, R.2
-
44
-
-
0001494816
-
Theory of hydration forces. Nonlocal electrostatic interaction of neutral surface
-
Leikin, S., and A. A. Kornyshev. 1990. Theory of hydration forces. Nonlocal electrostatic interaction of neutral surface. J. Chem. Phys. 92:6890-6898.
-
(1990)
J. Chem. Phys.
, vol.92
, pp. 6890-6898
-
-
Leikin, S.1
Kornyshev, A.A.2
-
45
-
-
0024094768
-
Accurate simulation of protein dynamics in solution
-
Levitt, M., and R. Sharon. 1988. Accurate simulation of protein dynamics in solution. Proc. Natl. Acad. Sci. USA. 85:7557-7561.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 7557-7561
-
-
Levitt, M.1
Sharon, R.2
-
46
-
-
0032233055
-
Computer simulations with explicit solvent: Recent progress in the thermodynamic decomposition of free energies and in modeling electostatic effects
-
Levy, R. M., and E. Gallicchio. 1998. Computer simulations with explicit solvent: recent progress in the thermodynamic decomposition of free energies and in modeling electostatic effects. Annu. Rev. Phys. Chem. 49:531-567.
-
(1998)
Annu. Rev. Phys. Chem.
, vol.49
, pp. 531-567
-
-
Levy, R.M.1
Gallicchio, E.2
-
48
-
-
0000972810
-
Strength of solvent-exposed salt-bridges
-
Luo, R., L. David, H. Hung, J. Devaney, and M. K. Gilson. 1999. Strength of solvent-exposed salt-bridges. J. Phys. Chem. 103:727-736.
-
(1999)
J. Phys. Chem.
, vol.103
, pp. 727-736
-
-
Luo, R.1
David, L.2
Hung, H.3
Devaney, J.4
Gilson, M.K.5
-
49
-
-
0031358503
-
Dielectric screening treatment of electrostatic salvation
-
Luo, R., J. Moult, and M. K. Gilson. 1997. Dielectric screening treatment of electrostatic salvation. J. Phys. Chem. 101:11226-11236.
-
(1997)
J. Phys. Chem.
, vol.101
, pp. 11226-11236
-
-
Luo, R.1
Moult, J.2
Gilson, M.K.3
-
50
-
-
33744799306
-
The Lorentz-Debye-Sack theory and dielectric screening of electrostatic effects in proteins and nucleic acids
-
J. S. Murray and K. Sen, editors. Elsevier Science, New York, NY
-
Mehler, E. L. 1996. The Lorentz-Debye-Sack theory and dielectric screening of electrostatic effects in proteins and nucleic acids. In Molecular Electrostatic Potentials: Concepts and Applications. Theoretical and Computational Chemistry. J. S. Murray and K. Sen, editors. Elsevier Science, New York, NY. 371-405.
-
(1996)
Molecular Electrostatic Potentials: Concepts and Applications. Theoretical and Computational Chemistry
, pp. 371-405
-
-
Mehler, E.L.1
-
51
-
-
0034050123
-
Low dielectric response in enzyme active site
-
Mertz, E. L., and L. I. Krishtalik. 2000. Low dielectric response in enzyme active site. Proc. Natl. Acad. Sci. USA. 97:2081-2086.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 2081-2086
-
-
Mertz, E.L.1
Krishtalik, L.I.2
-
52
-
-
0028184696
-
Microwave dielectric study on bound water of globule proteins in aqueous solution
-
Miura, N., N. Asaka, N. Shinyashiki, and S. Mashimo. 1994. Microwave dielectric study on bound water of globule proteins in aqueous solution. Biopolymers. 34:357-364.
-
(1994)
Biopolymers
, vol.34
, pp. 357-364
-
-
Miura, N.1
Asaka, N.2
Shinyashiki, N.3
Mashimo, S.4
-
53
-
-
0024086838
-
A theoretical study of the dielectric constant of protein
-
Nakamura, H., T. Sakamoto, and A. Wada. 1988. A theoretical study of the dielectric constant of protein. Protein Eng. 2:177-183.
-
(1988)
Protein Eng.
, vol.2
, pp. 177-183
-
-
Nakamura, H.1
Sakamoto, T.2
Wada, A.3
-
54
-
-
0037133342
-
Biological water at the protein surface: Dynamical solvation probed directly with femtosecond resolution
-
Pal, S. K., J. Peon, and A. H. Zewail. 2002. Biological water at the protein surface: dynamical solvation probed directly with femtosecond resolution. Proc. Natl. Acad. Sci. USA. 99:1763-1768.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 1763-1768
-
-
Pal, S.K.1
Peon, J.2
Zewail, A.H.3
-
55
-
-
0031335637
-
Continuum and dipole-lattice models of solvation
-
Papazyan, A., and A. Warshel. 1997. Continuum and dipole-lattice models of solvation. J. Phys. Chem. B. 101:11254-11264.
-
(1997)
J. Phys. Chem. B
, vol.101
, pp. 11254-11264
-
-
Papazyan, A.1
Warshel, A.2
-
56
-
-
0020482656
-
Building models of globular protein molecules from their amino acid sequences. I. Theory
-
Paul, C. H. 1982. Building models of globular protein molecules from their amino acid sequences. I. Theory. J. Mol. Biol. 155:53-62.
-
(1982)
J. Mol. Biol.
, vol.155
, pp. 53-62
-
-
Paul, C.H.1
-
57
-
-
0018094892
-
Electrostatic effects in proteins
-
Perutz, M. F. 1978. Electrostatic effects in proteins. Science. 201:1187-1191.
-
(1978)
Science
, vol.201
, pp. 1187-1191
-
-
Perutz, M.F.1
-
58
-
-
0346149569
-
Waves and interactions in solid state plasmas
-
Academic Press, New York, NY
-
Platzman, P. M., and P. A. Wolf. 1973. Waves and interactions in solid state plasmas. In Solid State Physics. Academic Press, New York, NY.
-
(1973)
Solid State Physics
-
-
Platzman, P.M.1
Wolf, P.A.2
-
59
-
-
0000777707
-
Energetic coupling between DNA bending and base pair opening
-
Ramstein, J., and R. Lavery. 1988. Energetic coupling between DNA bending and base pair opening. Proc. Natl. Acad. Sci. USA. 85:7231-7235.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 7231-7235
-
-
Ramstein, J.1
Lavery, R.2
-
60
-
-
0028093487
-
A view of thermodynamics of hydration emerging from continuum studies
-
Rashin, A. A., and M. A. Bukatin. 1994. A view of thermodynamics of hydration emerging from continuum studies. Biophys. Chem. 51:167-192.
-
(1994)
Biophys. Chem.
, vol.51
, pp. 167-192
-
-
Rashin, A.A.1
Bukatin, M.A.2
-
62
-
-
0001030002
-
Water dynamical anomalies evidenced by molecular-dynamics simulations at the solvent-protein interface
-
Rocchi, C., A. R. Bizzarri, and S. Cannistraro. 1998. Water dynamical anomalies evidenced by molecular-dynamics simulations at the solvent-protein interface. Phys. Rev. 57:3315-3325.
-
(1998)
Phys. Rev.
, vol.57
, pp. 3315-3325
-
-
Rocchi, C.1
Bizzarri, A.R.2
Cannistraro, S.3
-
63
-
-
0022988144
-
The modelling of electrostatic interactions in the function of globular proteins
-
Rogers, N. K. 1986. The modelling of electrostatic interactions in the function of globular proteins. Prog. Biophys. Mol. Biol. 48:37-66.
-
(1986)
Prog. Biophys. Mol. Biol.
, vol.48
, pp. 37-66
-
-
Rogers, N.K.1
-
64
-
-
4444342985
-
Image force near the electrode-electrolyte solution interface
-
Rubinshtein, A. I. 1981. Image force near the electrode-electrolyte solution interface. Soviet Electrochemistry. 16:1436-1439.
-
(1981)
Soviet Electrochemistry
, vol.16
, pp. 1436-1439
-
-
Rubinshtein, A.I.1
-
65
-
-
0020844320
-
Image forces at the metal electrode-electrolyte solution interface: Account of spatial dispersion of the solution permittivity
-
Rubinshtein, A. I. 1983. Image forces at the metal electrode-electrolyte solution interface: account of spatial dispersion of the solution permittivity. Phys. Stat. Sol. (b). 120:65-76.
-
(1983)
Phys. Stat. Sol. (b)
, vol.120
, pp. 65-76
-
-
Rubinshtein, A.I.1
-
66
-
-
0022052721
-
Importance of spatial dispersion of dielectric permittivity of the electrolyte solution in the effect of the negative ionic adsorption
-
Rubinshtein, A. I. 1985. Importance of spatial dispersion of dielectric permittivity of the electrolyte solution in the effect of the negative ionic adsorption. Soviet Electrochemistry. 21:433-440.
-
(1985)
Soviet Electrochemistry
, vol.21
, pp. 433-440
-
-
Rubinshtein, A.I.1
-
67
-
-
0022670514
-
Effect of spatial structure of the contacting media on the adsorption behavior of ions at the metal/electrolyte solution interface
-
Rubinshtein, A. I. 1986. Effect of spatial structure of the contacting media on the adsorption behavior of ions at the metal/electrolyte solution interface. Soviet Electrochemistry. 22:184-192.
-
(1986)
Soviet Electrochemistry
, vol.22
, pp. 184-192
-
-
Rubinshtein, A.I.1
-
68
-
-
4444250523
-
The influence of the surrounding media on the structural propensities of amino acid residues in proteins
-
M. Lebl and R. A. Houghten, editors. American Peptide Society, San Diego, CA
-
Rubinstein, A., and S. Sherman. 2001. The influence of the surrounding media on the structural propensities of amino acid residues in proteins. In Peptides: The Wave of the Future. M. Lebl and R. A. Houghten, editors. American Peptide Society, San Diego, CA. 332-333.
-
(2001)
Peptides: The Wave of the Future
, pp. 332-333
-
-
Rubinstein, A.1
Sherman, S.2
-
69
-
-
0023660015
-
Electrostatic effects on modification of charged groups in the active site cleft of subtuisin by protein engineering
-
Russell, A. J., P. G. Thomas, and A. R. Fersht. 1987. Electrostatic effects on modification of charged groups in the active site cleft of subtuisin by protein engineering. J. Mol. Biol. 193:803-813.
-
(1987)
J. Mol. Biol.
, vol.193
, pp. 803-813
-
-
Russell, A.J.1
Thomas, P.G.2
Fersht, A.R.3
-
70
-
-
0025661993
-
A precise analytical method for calculating the electrostatic energy of macromolecules in aqueous solution
-
Schaefer, M., and C. Froemmel. 1990, A precise analytical method for calculating the electrostatic energy of macromolecules in aqueous solution. J. Mol. Biol. 216:1045-1066.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 1045-1066
-
-
Schaefer, M.1
Froemmel, C.2
-
71
-
-
0035451052
-
What are the dielectric "constant" of proteins and how to validate electrostatic models?
-
Schutz, C. N., and A. Warshel. 2001. What are the dielectric "constant" of proteins and how to validate electrostatic models? Proteins. 44:400-417.
-
(2001)
Proteins
, vol.44
, pp. 400-417
-
-
Schutz, C.N.1
Warshel, A.2
-
72
-
-
0010624785
-
The effect of protein relaxation on charge-charge interactions and dielectric constants of proteins
-
Sham, Y. Y., I. Muegge, and A. Warshel. 1998. The effect of protein relaxation on charge-charge interactions and dielectric constants of proteins. Biophys. J. 74:1744-1753.
-
(1998)
Biophys. J.
, vol.74
, pp. 1744-1753
-
-
Sham, Y.Y.1
Muegge, I.2
Warshel, A.3
-
73
-
-
84986430566
-
Incorporating solvent and ion screening into molecular dynamics using the finite-difference Poisson-Boltzmann method
-
Sharp, K. 1991. Incorporating solvent and ion screening into molecular dynamics using the finite-difference Poisson-Boltzmann method. J. Comput. Chem. 12:454-468.
-
(1991)
J. Comput. Chem.
, vol.12
, pp. 454-468
-
-
Sharp, K.1
-
75
-
-
0035746132
-
Stabilized of the α-helix structure by polar side-chain interactions: Complex salt bridges, cation-π interactions, and C-H ... O H-bonds
-
Shi, Z., C. A. Olson, A. J. Bell, Jr., and N. R. Kallenbach. 2001. Stabilized of the α-helix structure by polar side-chain interactions: complex salt bridges, cation-π interactions, and C-H ... O H-bonds. Biopolymers. 60:366-380.
-
(2001)
Biopolymers
, vol.60
, pp. 366-380
-
-
Shi, Z.1
Olson, C.A.2
Bell Jr., A.J.3
Kallenbach, N.R.4
-
76
-
-
0026012015
-
Microscopic theory of the dielectric properties of proteins
-
Simonson, T., D. Perahia, and A. T. Brunger. 1991. Microscopic theory of the dielectric properties of proteins. Biophys. J. 59:670-690.
-
(1991)
Biophys. J.
, vol.59
, pp. 670-690
-
-
Simonson, T.1
Perahia, D.2
Brunger, A.T.3
-
77
-
-
0035312551
-
Macromolecular electrostatics: Continuum models and their growing pains
-
Simonson, T. 2001. Macromolecular electrostatics: continuum models and their growing pains. Curr. Opin. Struct. Biol. 11:243-252.
-
(2001)
Curr. Opin. Struct. Biol.
, vol.11
, pp. 243-252
-
-
Simonson, T.1
-
78
-
-
0029833446
-
Charge screening and the dielectric constant of proteins: Insights from molecular dynamics
-
Simonson, T., and C. L. Brooks, III. 1996. Charge screening and the dielectric constant of proteins: insights from molecular dynamics. J. Am. Chem. Soc. 118:8452-8458.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 8452-8458
-
-
Simonson, T.1
Brooks III, C.L.2
-
79
-
-
0028876827
-
Internal and interfacial dielectric properties of cytochrome c from molecular dynamics in aqueous solution
-
Simonson, T., and D. Perahia. 1995. Internal and interfacial dielectric properties of cytochrome c from molecular dynamics in aqueous solution. Proc. Natl. Acad. Sci. USA. 92:1082-1086.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 1082-1086
-
-
Simonson, T.1
Perahia, D.2
-
80
-
-
0036890316
-
Electrostatics in protein binding and function
-
Sinha, N., and S. J. Smith-Gill. 2002. Electrostatics in protein binding and function. Curr. Protein Pept. Sci. 3:601-614.
-
(2002)
Curr. Protein Pept. Sci.
, vol.3
, pp. 601-614
-
-
Sinha, N.1
Smith-Gill, S.J.2
-
81
-
-
33751158897
-
Modeling solvent in bimolecular systems
-
Smith, P. E., and B. M. Pettitt. 1994. Modeling solvent in bimolecular systems. J. Phys. Chem. 98:9700-9711.
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 9700-9711
-
-
Smith, P.E.1
Pettitt, B.M.2
-
82
-
-
84994998532
-
Ion pairs in alpha helices
-
Sundaralingam, M., Y. C. Sekharudu, N. Yathindra, and V. Ravichandran. 1987. Ion pairs in alpha helices. Proteins. 2:64-71.
-
(1987)
Proteins
, vol.2
, pp. 64-71
-
-
Sundaralingam, M.1
Sekharudu, Y.C.2
Yathindra, N.3
Ravichandran, V.4
-
83
-
-
33947468892
-
Theory of protein titration curves. I. General equations for impenetrable spheres
-
Tanford, C., and J. G. Kirkwood. 1957. Theory of protein titration curves. I. General equations for impenetrable spheres. J. Am. Chem. Soc. 79:5333-5339.
-
(1957)
J. Am. Chem. Soc.
, vol.79
, pp. 5333-5339
-
-
Tanford, C.1
Kirkwood, J.G.2
-
84
-
-
0035797737
-
Salt bridges stabilize the folded state of barnase
-
Vijayakumar, M., and H. Zhou. 2001. Salt bridges stabilize the folded state of barnase. J. Phys. Chem. 105:7334-7340.
-
(2001)
J. Phys. Chem.
, vol.105
, pp. 7334-7340
-
-
Vijayakumar, M.1
Zhou, H.2
-
85
-
-
0036280690
-
Accurate representation of B-DNA double helical structure with implicit solvent and counter ions
-
Wang, L., B. E. Hingerty, A. R. Srinivasan, W. K. Olson, and S. Broyde. 2002. Accurate representation of B-DNA double helical structure with implicit solvent and counter ions. Biophys. J. 83:382-406.
-
(2002)
Biophys. J.
, vol.83
, pp. 382-406
-
-
Wang, L.1
Hingerty, B.E.2
Srinivasan, A.R.3
Olson, W.K.4
Broyde, S.5
-
86
-
-
0000467270
-
Electrostatic basis of structure-function correlation in proteins
-
Warshel, A. 1981. Electrostatic basis of structure-function correlation in proteins. Acc. Chem. Res. 14:284-290.
-
(1981)
Acc. Chem. Res.
, vol.14
, pp. 284-290
-
-
Warshel, A.1
-
87
-
-
0017100947
-
Theoretical studies of enzymic reactions: Dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme
-
Warshel, A., and M. Levitt. 1976. Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme. J. Mol. Biol. 103:227-249.
-
(1976)
J. Mol. Biol.
, vol.103
, pp. 227-249
-
-
Warshel, A.1
Levitt, M.2
-
88
-
-
0021476470
-
Calculation of electrostatic interactions in biological systems and in solutions
-
Warshel, A., and S. T. Russell. 1984. Calculation of electrostatic interactions in biological systems and in solutions. Q. Rev. Biophys. 17:283-422.
-
(1984)
Q. Rev. Biophys.
, vol.17
, pp. 283-422
-
-
Warshel, A.1
Russell, S.T.2
-
89
-
-
0021480222
-
Macroscopic models for studies of electrostatic interactions in proteins: Limitations and applicability
-
Warshel, A., S. T. Russell, and A. K. Chung. 1984. Macroscopic models for studies of electrostatic interactions in proteins: limitations and applicability. Proc. Natl. Acad. Sci. USA. 81:4785-4789.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 4785-4789
-
-
Warshel, A.1
Russell, S.T.2
Chung, A.K.3
-
90
-
-
0020475509
-
Calculation of the electric potential in the active site cleft due to alpha-helix dipoles
-
Warwicker, J., and H. C. Watson. 1982. Calculation of the electric potential in the active site cleft due to alpha-helix dipoles. J. Mol. Biol. 157:671-679.
-
(1982)
J. Mol. Biol.
, vol.157
, pp. 671-679
-
-
Warwicker, J.1
Watson, H.C.2
-
91
-
-
0037963208
-
An empirical model for electrostatic interactions in proteins incorporating multiple geometry-dependent dielectric constants
-
Wisz, M. S., and H. W. Hellinga. 2003. An empirical model for electrostatic interactions in proteins incorporating multiple geometry-dependent dielectric constants. Proteins. 51:360-377.
-
(2003)
Proteins
, vol.51
, pp. 360-377
-
-
Wisz, M.S.1
Hellinga, H.W.2
|