Starting to unravel the toxoglossan knot: Molecular phylogeny of the "turrids" (Neogastropoda: Conoidea)

Molecular Phylogenetics and Evolution

Volumn 47, Issue 3, 2008, Pages 1122-1134

  Puillandre, N ^a,b   Samadi, S ^a   Boisselier, M C ^a   Sysoev, A V ^c   Kantor, Y I ^d   Cruaud, C ^e   Couloux, A ^e   Bouchet, P ^b  

^a UPMC ^*  (France)

^b MUSÉUM NATIONAL D'HISTOIRE NATURELLE   (France)

^c MOSCOW STATE UNIVERSITY   (Russian Federation)

^d SEVERTSOV INSTITUTE OF ECOLOGY AND EVOLUTION   (Russian Federation)

^e CENTRE NATIONAL DE SÉQUENÇAGE   (France)

Author keywords

18S rRNA; 28S rRNA; Classification; COI gene; Conidae; Conoidea; H3 gene; Molecular phylogeny; Toxoglossa; Turridae; West Pacific

Indexed keywords

ANIMAL; ARTICLE; CLASSIFICATION; GASTROPOD; GENETIC DATABASE; GENETICS; MOLECULAR EVOLUTION; PHYLOGENY;

ANIMALS; DATABASES, GENETIC; EVOLUTION, MOLECULAR; GASTROPODA; PHYLOGENY;

CONIDAE; CONOIDEA; MOLLUSCA; NEOGASTROPODA; TOXOGLOSSA; TURRIDAE;

EID: 44149107347     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2007.11.007     Document Type: Article

References (68)

1. Bergsten J. A review of long-branch attraction. Cladistics 21 (2005) 163-193
2. Bouchet P. Turrid genera and mode of development: the use and abuse of protoconch morphology. Malacologia 32 (1990) 69-77
3. Bouchet P., and Rocroi J.-P. Classification and nomenclator of Gastropods families. Malacologia 47 (2005)
4. Bouchet P., and Warén A. Revision of the north-east Atlantic bathyal and abyssal Turridae (Mollusca, Gastropoda). J. Molluscan Stud. Suppl. 8 (1980) 1-119
5. Chang C.-K. Reevaluation of the classification of Turridae. Bull. Malacol. Taiwan 19 (1995) 49
6. Chang C.-K. Small Turrids of Taiwan (2001), Thorsson, W.M., Taiwan
7. Colgan D.J., Ponder W.F., Beacham E., and Macaranas J. Gastropod phylogeny based on six fragments from four genes representing coding or non-coding and mitochondrial or nuclear DNA. Molluscan Res. 23 (2003) 123-148
8. Colgan D.J., Ponder W.F., Beacham E., and Macaranas J. Molecular phylogenetics of Caenogastropoda (Gastropoda: Mollusca). Mol. Phylogenet. Evol. 42 (2007) 717-737
9. Cossmann, M., 1896. Essais de Paléoconchologie comparée, 2ème livraison. Paris.
10. Darlu P., and Tassy P. La reconstruction phylogénétique. Concepts et méthodes (1993), Masson, Paris
11. Dayrat B., Tillier A., Lecointre G., and Tillier S. New clades of Euthyneuran Gastropods (Mollusca) from 28S rRNA sequences. Mol. Phylogenet. Evol. 19 (2001) 225-235
12. Duda T.F., and Kohn A.J. Species-level phylogeography and evolutionary history of the hyperdiverse marine gastropod genus Conus. Mol. Phylogenet. Evol. 34 (2005) 257-272
13. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
14. Felsenstein J. Inferring Phylogenies (2004), Sinauer Associates, Sunderland
15. Fischer P. Manuel de conchyliologie et de paléontologie conchyliologique (1887), F. Savy, Paris
16. Folmer O., Black M., Hoeh W., Lutz R., and Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3 (1994) 294-299
17. Fry B.G., Vidal N., Norman J.A., Vonk F.J., Scheib H., Ramjan S.F.R., Kuruppu S., Fung K., Hedges S.B., Richardson M.K., Hodgson W.C., Ignjatovic V., Summerhayes R., and Kochva E. Early evolution of the venom system in lizards and snakes. Nature 439 (2006) 584-588
18. Giribet G., Carranza S., Bagui J., Riutort M., and Ribera C. First molecular evidence for the existence of a Tardigrada + Arthropoda clade. Mol. Biol. Evol. 13 (1996) 76-84
19. Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
20. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41 (1999) 95-98
21. Harasewych M.G., Adamkewicz S.L., Blake J.A., Saudek D., Spriggs T., and Bult C.J. Neogastropod phylogeny: a molecular perspective. J. Molluscan Stud. 63 (1997) 327-351
22. Hassouna M., Michot B., and Bachellerie J.-P. The complete nucleotide sequence of mouse 28SrRNA gene. Implications for the process of size increase of the large subunit rRNA of higher eukaryotes. Nucleic Acids Res. 12 (1984) 3563-3583
23. Hebert P.D.N., Cywinska A., Ball S.L., and deWaard J.R. Biological identifications through DNA Barcodes. Proc. R. Soc. Lond. B 270 (2003) 313-321
24. Hedley C. A revision of the Australian Turridae. Rec. Aust. Mus. 13 (1922) 213-359
25. Hillis D.M., and Bull J.J. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst. Biol. 42 (1993) 182-192
26. Huelsenbeck J.P., Ronquist F., and Hall B. MrBayes: bayesian inference of phylogeny. Bioinformatics 17 (2001) 754-755
27. Jovelin R., and Justine J.-L. Phylogenetic relationships within the Polyopisthocotylean monogeneans (Plathyhelminthes) inferred from partial 28S rDNA sequences. Int. J. Parasitol. 31 (2001) 393-401
28. Kantor Y.I. On the morphology and homology of the "central tooth" in the radula of Turrinae (Conoidea: Turridae). Ruthenica 16 (2006) 47-52
29. Kantor Y.I., Medinskaya A.I., and Taylor J.D. Foregut anatomy and relationships of the Crassispirinae (Gastropoda, Conoidea). Bull. Nat. Hist. Mus. Lond. (Zool.) 63 (1997) 55-92
30. Kantor Y.I., and Taylor J.D. The foregut anatomy of Strictispira paxillus (Reeve, 1845) (Conoidea: Strictispiridae). J. Molluscan Stud. 60 (1994) 343-346
31. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 1. Subfamily Turrinae. Natal Mus. Ann. 25 (1983) 549-585
32. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 2. Subfamily Clavatulinae. Natal Mus. Ann. 26 (1985) 417-470
33. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 3. Subfamily Borsoniinae. Natal Mus. Ann. 27 (1986) 633-720
34. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 4. Subfamily Drilliinae, Crassispirinae and Strictispirinae. Natal Mus. Ann. 29 (1988) 167-320
35. Kilburn R.N. Notes on Ptychobela and Brachytoma, with the description of a new species from Mozambique (Mollusca: Gastropoda: Turridae). Natal Mus. Ann. 30 (1989) 185-196
36. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 5. Subfamily Taraninae. Natal Mus. Ann. 32 (1991) 325-339
37. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 6. Subfamily Mangeliinae, section 1. Natal Mus. Ann. 33 (1992) 461-575
38. Kilburn R.N. Turridae (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 6. Subfamily Mangeliinae, section 2. Natal Mus. Ann. 34 (1993) 317-367
39. Kilburn R.N. Turridae [s.l.] (Mollusca: Gastropoda) of southern Africa and Mozambique. Part 7. Subfamily Crassispirinae, section 2. Natal Mus. Ann. 35 (1994) 177-228
40. Kilburn R.N. Turridae (s.l.) of southern Africa and Mozambique (Mollusca: Gastropoda: Conoidea). Part 8. Conidae: subfamily Mangeliinae, section 3. Natal Mus. Ann. 36 (1995) 261-269
41. Kilburn R.N. The identities of Otitoma and Antimitra (Mollusca: Gastropoda: Conidae and Buccinidae). Afr. Invertebr. 45 (2004) 263-270
42. Kohn A.J. Tempo and mode of evolution in Conidae. Malacologia 32 (1990) 55-67
43. Mason-Gamer R.J., and Kellogg E.A. Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Graminae). Syst. Biol. 45 (1996) 524-545
44. McLean J.H. A revised classification of the family Turridae, with the proposal of new subfamilies, genera and subgenera from the Eastern pacific. Veliger 14 (1971) 114-130
45. Medinskaya A.I. Foregut anatomy of the Turrinae (Gastropoda, Conoidea, Turridae). Ruthenica 12 (2002) 135-159
46. Medinskaya A.I., and Sysoev A. The anatomy of Zemacies excelsa, with a description of a new subfamily of Turridae (Gastropoda, Conoidea). Ruthenica 13 (2003) 81-87
47. Morrison, J.P.E., 1965. On the families of Turridae. In: The 31st Annual Meeting of the American Malacologial Union, pp. 1-2.
48. Okusu A., Schwabe E., Eernisse D.J., and Giribet G. Towards a phylogeny of chitons (Mollusca, Polyplacophora) based on combined analysis of five molecular loci. Org. Divers. Evol. 3 (2003) 281-302
49. Posada D., and Crandall K.A. Selecting models of nucleotide substitution: an application to human immunodeficiency virus 1 (HIV-1). Mol. Biol. Evol. 18 (2001) 897-906
50. Powell A.W.B. The New-Zealand recent and fossil Mollusca of the family Turridae. With general notes on turrid nomenclature and systematics. Bull. Auckland Inst. Mus. 2 (1942) 1-192
51. Powell A.W.B. The molluscan families Speightiidae ans Turridae. An evaluation of the valid taxa, both recent and fossil, with list of characteristic species. Bull. Auckland Inst. Mus. 5 (1966) 1-184
52. Rosenberg G. Reproducibility of results in phylogenetic analysis of mollusks: a reanalysis of the Taylor, Kantor and Sysoev (1193) data set for conoidean gastropods. Am. Malac. Bull. 14 (1998) 219-228
53. Shimek R.L., and Kohn A.J. Functional morphology and evolution of the toxoglossan radula. Malacologia 20 (1981) 423-438
54. Shuto T. New turrid taxa from the Australian waters. Mem. Fac. Sci. Kyushu Univ. Serie D Geol. 25 (1983) 16
55. Soltis P.S., and Soltis D.E. Applying the bootstrap in phylogeny reconstruction. Stat. Sci. 18 (2003) 256-267
56. Strugnell J., Norman M., Jackson J., Drummond A.J., and Cooper A. Molecular phylogeny of coleoid cephalopods (Mollusca: Cephalopoda) using a multigene approach; the effect of data partitioning on resolving phylogenies in a bayesian framework. Mol. Phylogenet. Evol. 37 (2005) 426-441
57. Swofford D.L. PAUP*. Phylogenetic Analysis Using Parsimony* and Other Methods (2002), Sinauer Associates, Sunderland
58. Sysoev A., and Bouchet P. Taxonomic reevaluation of Gemmuloborsonia Shuto, 1989 (Gastropoda: Conoidea), with a description of recent deep-water species. J. Molluscan Stud. 62 (1996) 75-87
59. Sysoev A., and Kantor Y.I. A new genus and species of "Cochlespira-like" turrids. Apex 5 (1990) 1-6
60. Taylor, J.D., 1994. Foregut anatomy of the larger species of Turrinae, Clavatulinae and Crassispirinae (Gastropoda: Conoidea) from Hong-Kong. In: Third International Workshop on the Malacofauna of Hong-Kong and Southern China.
61. Taylor J.D., Kantor Y.I., and Sysoev A.V. Foregut anatomy, feedings mechanisms and classification of the Conoidea (= Toxoglossa)(Gastropoda). Bull. Nat. Hist. Mus. Lond. 59 (1993) 125-170
62. Terryn Y. A Collectors Guide to Recent Terebridae (Mollusca: Neogastropoda) (2007), ConchBooks, Hackenheim
63. Thiele J. Handbuch der systematischen weichtierkunde (1929), G. Fischer, Jena
64. Tippet D.L., and Tucker J.K. Taxonomic notes on Kenyonia Brazier and Conopleura Hinds (Gastropoda: Conoidea). Nautilus 108 (1995) 37-38
65. Tucker J.K. Catalogue of recent and fossil turrids (Mollusca: Gastropoda). Zootaxa 682 (2004) 1-1295
66. Wenz W. Teil 1: Allgemeiner Teil und Prosobranchia. In: Schindewolf O.H. (Ed). Handbuch de paläozoologie, Band 6, Gastropoda (1938-1944), Borntraeger, Berlin
67. Wiens J.J. Does adding characters with missing data increase or decrease phylogenetic accuracy?. Syst. Biol. 47 (1998) 625-640
68. Zander R.H. Minimal values for reliability of bootstrap and Jackknife proportions, Decay index, and bayesian posterior probability. PhyloInformatics 2 (2004) 1-13