-
1
-
-
0043173644
-
Oxidation of glyceraldehyde-3-phosphate dehydrogenase enhances its binding to nucleic acids
-
Arutyunova, E.I., Danshina, P.V., Domnina, L.V., Pleten, A.P., and Muronetz, V.I. (2003). Oxidation of glyceraldehyde-3-phosphate dehydrogenase enhances its binding to nucleic acids. Biochem. Biophys. Res. Commun. 307, 547-552.
-
(2003)
Biochem. Biophys. Res. Commun.
, vol.307
, pp. 547-552
-
-
Arutyunova, E.I.1
Danshina, P.V.2
Domnina, L.V.3
Pleten, A.P.4
Muronetz, V.I.5
-
2
-
-
0025305691
-
Effect of deletions at structural domains of group II intron bl1 on self-splicing in vitro
-
Bachl, J., and Schmelzer, C. (1990). Effect of deletions at structural domains of group II intron bl1 on self-splicing in vitro. J. Mol. Biol. 212, 113-125.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 113-125
-
-
Bachl, J.1
Schmelzer, C.2
-
3
-
-
0032758073
-
StreptoTag: A novel method for the isolation of RNA-binding proteins
-
Bachler, M., Schroeder, R., and von Ahsen, U. (1999). StreptoTag: a novel method for the isolation of RNA-binding proteins. RNA 5, 1509-1516.
-
(1999)
RNA
, vol.5
, pp. 1509-1516
-
-
Bachler, M.1
Schroeder, R.2
von Ahsen, U.3
-
4
-
-
4344716427
-
Isolating group II intron binding proteins with the streptotag method
-
Diploma thesis, University of Vienna, Austria
-
Böck, P. (2002). Isolating group II intron binding proteins with the streptotag method. Diploma thesis, University of Vienna, Austria.
-
(2002)
-
-
Böck, P.1
-
5
-
-
0035368207
-
The ins and outs of group II introns
-
Bonen, L., and Vogel, J. (2001). The ins and outs of group II introns. Trends Genet. 17, 322-331.
-
(2001)
Trends Genet.
, vol.17
, pp. 322-331
-
-
Bonen, L.1
Vogel, J.2
-
6
-
-
0033575329
-
The bacterial magnesium transporter CorA can functionally substitute for its putative homologue Mrs2p in the yeast inner mitochondrial membrane
-
Bui, D.M., Gregan, J., Jarosch, E., Ragnini, A., and Schweyen, R.J. (1999). The bacterial magnesium transporter CorA can functionally substitute for its putative homologue Mrs2p in the yeast inner mitochondrial membrane. J. Biol. Chem. 274, 20438-20443.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 20438-20443
-
-
Bui, D.M.1
Gregan, J.2
Jarosch, E.3
Ragnini, A.4
Schweyen, R.J.5
-
7
-
-
0029869019
-
A tyrosyl-tRNA synthetase protein induces tertiary folding of the group I intron catalytic core
-
Caprara, M.G., Mohr, G., and Lambowitz, A.M. (1996). A tyrosyl-tRNA synthetase protein induces tertiary folding of the group I intron catalytic core. J. Mol. Biol. 257, 512-531.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 512-531
-
-
Caprara, M.G.1
Mohr, G.2
Lambowitz, A.M.3
-
8
-
-
0025810123
-
Intron phylogeny: A new hypothesis
-
Cavalier-Smith, T. (1991). Intron phylogeny: a new hypothesis. Trends Genet. 7, 145-148.
-
(1991)
Trends Genet.
, vol.7
, pp. 145-148
-
-
Cavalier-Smith, T.1
-
9
-
-
0029760743
-
Specific interaction in vitro and in vivo of glyceraldehyde-3-phosphate dehydrogenase and LA protein with cis-acting RNAs of human parainfluenza virus type 3
-
De, B.P., Gupta, S., Zhao, H., Drazba, J.A., and Banerjee, A. K. (1996). Specific interaction in vitro and in vivo of glyceraldehyde-3-phosphate dehydrogenase and LA protein with cis-acting RNAs of human parainfluenza virus type 3. J. Biol. Chem. 271, 24728-24735.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 24728-24735
-
-
De, B.P.1
Gupta, S.2
Zhao, H.3
Drazba, J.A.4
Banerjee, A.K.5
-
10
-
-
0037316278
-
Interaction of glyceraldehyde-3-phosphate dehydrogenase with secondary and tertiary RNA structural elements of the hepatitis A virus 3′ translated and non-translated regions
-
Dollenmaler, G., and Weitz, M. (2003). Interaction of glyceraldehyde-3-phosphate dehydrogenase with secondary and tertiary RNA structural elements of the hepatitis A virus 3′ translated and non-translated regions. J. Gen. Virol. 84, 403-414.
-
(2003)
J. Gen. Virol.
, vol.84
, pp. 403-414
-
-
Dollenmaler, G.1
Weitz, M.2
-
11
-
-
0035449356
-
2+ homeostasis is critical for group II intron splicing in vivo
-
2+ homeostasis is critical for group II intron splicing in vivo. Genes Dev. 15, 2229-2237.
-
(2001)
Genes Dev.
, vol.15
, pp. 2229-2237
-
-
Gregan, J.1
Kolisek, M.2
Schweyen, R.J.3
-
12
-
-
0029163563
-
RNA chaperones and the RNA folding problem
-
Herschlag, D. (1995). RNA chaperones and the RNA folding problem. J. Biol. Chem. 270, 20871-20874.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 20871-20874
-
-
Herschlag, D.1
-
13
-
-
0035865141
-
Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts
-
Jenkins, B.D., and Barkan, A. (2001). Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts. EMBO J. 20, 872-879.
-
(2001)
EMBO J.
, vol.20
, pp. 872-879
-
-
Jenkins, B.D.1
Barkan, A.2
-
14
-
-
0031106356
-
Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors
-
Jenkins, B.D., Kulhanek, D.J., and Barkan, A. (1997). Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors. Plant Cell 9, 283-296.
-
(1997)
Plant Cell
, vol.9
, pp. 283-296
-
-
Jenkins, B.D.1
Kulhanek, D.J.2
Barkan, A.3
-
15
-
-
0002671710
-
Group I and group II ribozymes as RNPs: Clues to the past and guides to the future
-
2nd Edition, R.F. Gesteland, T.R. Cech and J.F. Atkins, eds. (Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory Press)
-
Lambowitz, A., Caprara, M., Zimmerly, S., and Perlman, P. (1999). Group I and group II ribozymes as RNPs: clues to the past and guides to the future. In: The RNA World, 2nd Edition, R.F. Gesteland, T.R. Cech and J.F. Atkins, eds. (Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory Press), pp. 451-485.
-
(1999)
The RNA World
, pp. 451-485
-
-
Lambowitz, A.1
Caprara, M.2
Zimmerly, S.3
Perlman, P.4
-
16
-
-
0038049910
-
Group II introns: Structure and catalytic versatility of large natural ribozymes
-
Lehmann, K., and Schmidt, U. (2003). Group II introns: structure and catalytic versatility of large natural ribozymes. Crit. Rev. Biochem. Mol. Biol. 38, 249-303.
-
(2003)
Crit. Rev. Biochem. Mol. Biol.
, vol.38
, pp. 249-303
-
-
Lehmann, K.1
Schmidt, U.2
-
17
-
-
0033983545
-
Compartment-specific isoforms of TPI and GAPDH are imported into diatom mitochondria as a fusion protein: Evidence in favor of a mitochondrial origin of the eukaryotic glycolytic pathway
-
Liaud, M.F., Lichtle, C., Apt, K., Martin, W., and Cerff, R. (2000). Compartment-specific isoforms of TPI and GAPDH are imported into diatom mitochondria as a fusion protein: evidence in favor of a mitochondrial origin of the eukaryotic glycolytic pathway. Mol. Biol. Evol. 17, 213-223.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 213-223
-
-
Liaud, M.F.1
Lichtle, C.2
Apt, K.3
Martin, W.4
Cerff, R.5
-
18
-
-
0034713424
-
Specific interaction between the hepatitis delta virus RNA and glyceraldehyde 3-phosphate dehydrogenase: An enhancement on ribozyme catalysis
-
Lin, S.S., Chang, S.C., Wang, Y.H., Sun, C.Y., and Chang, M.F. (2000). Specific interaction between the hepatitis delta virus RNA and glyceraldehyde 3-phosphate dehydrogenase: an enhancement on ribozyme catalysis. Virology 271, 46-57.
-
(2000)
Virology
, vol.271
, pp. 46-57
-
-
Lin, S.S.1
Chang, S.C.2
Wang, Y.H.3
Sun, C.Y.4
Chang, M.F.5
-
19
-
-
0027169132
-
Evidence for a chimeric nature of nuclear genomes: Eubacterial origin of eukaryotic glyceraldehyde-3-phosphate dehydrogenase genes
-
Martin, W., Brinkmann, H., Savonna, C., and Cerff, R. (1993). Evidence for a chimeric nature of nuclear genomes: eubacterial origin of eukaryotic glyceraldehyde-3-phosphate dehydrogenase genes. Proc. Natl. Acad. Sci. USA 90, 8692-8696.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 8692-8696
-
-
Martin, W.1
Brinkmann, H.2
Savonna, C.3
Cerff, R.4
-
20
-
-
0035197418
-
An overview of endosymbiotic models for the origins of eukaryotes, their ATP-producing organelles (mitochondria and hydrogenosomes), and their heterotrophic lifestyle
-
Martin, W., Hoffmeister, M., Rotte, C., and Henze, K. (2001). An overview of endosymbiotic models for the origins of eukaryotes, their ATP-producing organelles (mitochondria and hydrogenosomes), and their heterotrophic lifestyle. Biol. Chem. 382, 1521-1539.
-
(2001)
Biol. Chem.
, vol.382
, pp. 1521-1539
-
-
Martin, W.1
Hoffmeister, M.2
Rotte, C.3
Henze, K.4
-
21
-
-
0037126592
-
Mechanism of maturase-promoted group II intron splicing
-
Matsuura, M., Noah, J.W., and Lambowitz, A.M. (2001). Mechanism of maturase-promoted group II intron splicing. EMBO J. 20, 7259-7270.
-
(2001)
EMBO J.
, vol.20
, pp. 7259-7270
-
-
Matsuura, M.1
Noah, J.W.2
Lambowitz, A.M.3
-
22
-
-
0029066770
-
Structure and activities of group II introns
-
Michel, F., and Ferat, J.L. (1995). Structure and activities of group II introns. Annu. Rev. Biochem. 64, 435-461.
-
(1995)
Annu. Rev. Biochem.
, vol.64
, pp. 435-461
-
-
Michel, F.1
Ferat, J.L.2
-
23
-
-
0024428420
-
Comparative and functional anatomy of group II catalytic introns - A review
-
Michel, F., Umesono, K., and Ozeki, H. (1989). Comparative and functional anatomy of group II catalytic introns - a review. Gene 82, 5-30.
-
(1989)
Gene
, vol.82
, pp. 5-30
-
-
Michel, F.1
Umesono, K.2
Ozeki, H.3
-
24
-
-
0028816615
-
+-binding region (Rossmann fold)
-
+-binding region (Rossmann fold). J. Biol. Chem. 270, 2755-2763.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 2755-2763
-
-
Nagy, E.1
Rigby, W.F.2
-
25
-
-
0029151794
-
Overexpression of DEAD box protein pMSS116 promotes ATP-dependent splicing of a yeast group II intron in vitro
-
[corrected and republished with original paging in Nucleic Acids Res. 23 (1995), pp. 2966-2972]
-
Niemer, I., Schmelzer, C., and Borner, G.V. (1995). Overexpression of DEAD box protein pMSS116 promotes ATP-dependent splicing of a yeast group II intron in vitro [corrected and republished with original paging in Nucleic Acids Res. 23 (1995), pp. 2966-2972]. Nucleic Acids Res. 23, 2966-2972.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2966-2972
-
-
Niemer, I.1
Schmelzer, C.2
Borner, G.V.3
-
26
-
-
1842832249
-
Crystal structure of E. coli YhbY: A representative of a novel class of RNA binding proteins
-
Ostheimer, G.J., Barkan, A., and Matthews, B.W. (2002). Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins. Structure 10, 1593-1601.
-
(2002)
Structure
, vol.10
, pp. 1593-1601
-
-
Ostheimer, G.J.1
Barkan, A.2
Matthews, B.W.3
-
27
-
-
0042525906
-
Group II intron splicing factors derived by diversification of an ancient RNA-binding domain
-
Ostheimer, G.J., Williams-Carrier, R., Belcher, S., Osborne, E., Gierke, J., and Barkan, A. (2003). Group II intron splicing factors derived by diversification of an ancient RNA-binding domain. EMBO J. 22, 3919-3929.
-
(2003)
EMBO J.
, vol.22
, pp. 3919-3929
-
-
Ostheimer, G.J.1
Williams-Carrier, R.2
Belcher, S.3
Osborne, E.4
Gierke, J.5
Barkan, A.6
-
28
-
-
0033571587
-
A factor related to pseudouridine synthases is required for chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii
-
Perron, K., Goldschmidt-Clermont, M., and Rochaix, J.D. (1999). A factor related to pseudouridine synthases is required for chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii. EMBO J. 18, 6481-6490.
-
(1999)
EMBO J.
, vol.18
, pp. 6481-6490
-
-
Perron, K.1
Goldschmidt-Clermont, M.2
Rochaix, J.D.3
-
29
-
-
0032704837
-
Human hepatic glyceraldehyde-3-phosphate dehydrogenase binds to the poly(U) tract of the 3′ non-coding region of hepatitis C virus genomic RNA
-
Petrik, J., Parker, H., and Alexander, G.J. (1999). Human hepatic glyceraldehyde-3-phosphate dehydrogenase binds to the poly(U) tract of the 3′ non-coding region of hepatitis C virus genomic RNA. J. Gen. Virol. 80, 3109-3113.
-
(1999)
J. Gen. Virol.
, vol.80
, pp. 3109-3113
-
-
Petrik, J.1
Parker, H.2
Alexander, G.J.3
-
30
-
-
0032103821
-
The architectural organization and mechanistic function of group II intron structural elements
-
Qin, P.Z., and Pyle, A.M. (1998). The architectural organization and mechanistic function of group II intron structural elements. Curr. Opin. Struct. Biol. 8, 301-308.
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 301-308
-
-
Qin, P.Z.1
Pyle, A.M.2
-
31
-
-
0035794689
-
Identification of an RNA-protein complex involved in chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii
-
Rivier, C., Goldschmidt-Clermont, M., and Rochaix, J.D. (2001). Identification of an RNA-protein complex involved in chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii. EMBO J. 20, 1765-1773.
-
(2001)
EMBO J.
, vol.20
, pp. 1765-1773
-
-
Rivier, C.1
Goldschmidt-Clermont, M.2
Rochaix, J.D.3
-
32
-
-
0030266995
-
Post-transcriptional regulation of chloroplast gene expression in Chlamydomonas reinhardtii
-
Rochaix, J.D. (1996). Post-transcriptional regulation of chloroplast gene expression in Chlamydomonas reinhardtii. Plant Mol. Biol. 32, 327-341.
-
(1996)
Plant Mol. Biol.
, vol.32
, pp. 327-341
-
-
Rochaix, J.D.1
-
34
-
-
0024961642
-
Mitochondrial splicing requires a protein from a novel helicase family
-
Seraphin, B., Simon, M., Boulet, A., and Faye, G. (1989). Mitochondrial splicing requires a protein from a novel helicase family. Nature 337, 84-87.
-
(1989)
Nature
, vol.337
, pp. 84-87
-
-
Seraphin, B.1
Simon, M.2
Boulet, A.3
Faye, G.4
-
35
-
-
0027518424
-
Sequence-specific binding of transfer RNA by glyceraldehyde-3-phosphate dehydrogenase
-
Singh, R., and Green, M.R. (1993). Sequence-specific binding of transfer RNA by glyceraldehyde-3-phosphate dehydrogenase. Science 259, 365-368.
-
(1993)
Science
, vol.259
, pp. 365-368
-
-
Singh, R.1
Green, M.R.2
-
36
-
-
0029870382
-
Enhancement of hammerhead ribozyme catalysis by glyceraldehyde-3-phosphate dehydrogenase
-
Sioud, M., and Jespersen, L. (1996). Enhancement of hammerhead ribozyme catalysis by glyceraldehyde-3-phosphate dehydrogenase. J. Mol. Biol. 257, 775-789.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 775-789
-
-
Sioud, M.1
Jespersen, L.2
-
37
-
-
0032973950
-
New insights into an old protein: The functional diversity of mammalian glyceraldehyde-3-phosphate dehydrogenase
-
Sirover, M.A. (1999). New insights into an old protein: the functional diversity of mammalian glyceraldehyde-3-phosphate dehydrogenase. Biochim. Biophys. Acta 1432, 159-184.
-
(1999)
Biochim. Biophys. Acta
, vol.1432
, pp. 159-184
-
-
Sirover, M.A.1
-
38
-
-
0036233276
-
A novel mechanism for protein-assisted group I intron splicing
-
Solem, A., Chatterjee, P., and Caprara, M.G. (2002). A novel mechanism for protein-assisted group I intron splicing. RNA 8, 412-425.
-
(2002)
RNA
, vol.8
, pp. 412-425
-
-
Solem, A.1
Chatterjee, P.2
Caprara, M.G.3
-
39
-
-
0034844560
-
CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin
-
Till, B., Schmitz-Linneweber, C., Williams-Carrier, R., and Barkan, A. (2001). CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin. RNA 7, 1227-1238.
-
(2001)
RNA
, vol.7
, pp. 1227-1238
-
-
Till, B.1
Schmitz-Linneweber, C.2
Williams-Carrier, R.3
Barkan, A.4
-
40
-
-
0036712305
-
RNA chaperone StpA loosens interactions of the tertiary structure in the td group I intron in vivo
-
Waldsich, C., Grossberger, R., and Schroeder, R. (2002). RNA chaperone StpA loosens interactions of the tertiary structure in the td group I intron in vivo. Genes Dev. 16, 2300-2312.
-
(2002)
Genes Dev.
, vol.16
, pp. 2300-2312
-
-
Waldsich, C.1
Grossberger, R.2
Schroeder, R.3
-
41
-
-
0031965013
-
In vitro selection and characterization of streptomycin-binding RNAs: Recognition discrimination between antibiotics
-
Wallace, S.T., and Schroeder, R. (1998). In vitro selection and characterization of streptomycin-binding RNAs: recognition discrimination between antibiotics. RNA 4, 112-123.
-
(1998)
RNA
, vol.4
, pp. 112-123
-
-
Wallace, S.T.1
Schroeder, R.2
-
42
-
-
0033180584
-
A reverse transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA
-
Wank, H., SanFilippo, J., Singh, R.N., Matsuura, M., and Lambowitz, A.M. (1999). A reverse transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA. Mol. Cell 4, 239-250.
-
(1999)
Mol. Cell
, vol.4
, pp. 239-250
-
-
Wank, H.1
SanFilippo, J.2
Singh, R.N.3
Matsuura, M.4
Lambowitz, A.M.5
-
43
-
-
0026700037
-
The nuclear gene MRS2 is essential for the excision of group II introns from yeast mitochondrial transcripts in vivo
-
Wiesenberger, G., Waldherr, M., and Schweyen, R.J. (1992). The nuclear gene MRS2 is essential for the excision of group II introns from yeast mitochondrial transcripts in vivo. J. Biol. Chem. 267, 6963-6969.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 6963-6969
-
-
Wiesenberger, G.1
Waldherr, M.2
Schweyen, R.J.3
-
44
-
-
0033934137
-
Functional significance of the interaction of hepatitis A virus RNA with glyceraldehyde 3-phosphate dehydrogenase (GAPDH): Opposing effects of GAPDH and polypyrimidine tract binding protein on internal ribosome entry site function
-
Yi, M., Schultz, D.E., and Lemon, S.M. (2000). Functional significance of the interaction of hepatitis A virus RNA with glyceraldehyde 3-phosphate dehydrogenase (GAPDH): opposing effects of GAPDH and polypyrimidine tract binding protein on internal ribosome entry site function. J. Virol. 74, 6459-6468.
-
(2000)
J. Virol.
, vol.74
, pp. 6459-6468
-
-
Yi, M.1
Schultz, D.E.2
Lemon, S.M.3
-
45
-
-
0032529511
-
Identification of glyceraldehyde-3-phosphate dehydrogenase as a cellular protein that binds to the hepatitis B virus posttranscriptional regulatory element
-
Zang, W.Q., Fieno, A.M., Grant, R.A., and Yen, T.S. (1998). Identification of glyceraldehyde-3-phosphate dehydrogenase as a cellular protein that binds to the hepatitis B virus posttranscriptional regulatory element. Virology 248, 46-52.
-
(1998)
Virology
, vol.248
, pp. 46-52
-
-
Zang, W.Q.1
Fieno, A.M.2
Grant, R.A.3
Yen, T.S.4
-
46
-
-
0035280637
-
The human mitochondrial Mrs2 protein functionally substitutes for its yeast homologue, a candidate magnesium transporter
-
Zsurka, G., Gregan, J., and Schweyen, R.J. (2001). The human mitochondrial Mrs2 protein functionally substitutes for its yeast homologue, a candidate magnesium transporter. Genomics 72, 158-168.
-
(2001)
Genomics
, vol.72
, pp. 158-168
-
-
Zsurka, G.1
Gregan, J.2
Schweyen, R.J.3
|