-
1
-
-
34548392335
-
Analysis of protein phosphorylation on a proteome-scale
-
Collins, M.O., L. Yu, and J.S. Choudhary. 2007. Analysis of protein phosphorylation on a proteome-scale. Proteomics 7:2751-2768.
-
(2007)
Proteomics
, vol.7
, pp. 2751-2768
-
-
Collins, M.O.1
Yu, L.2
Choudhary, J.S.3
-
2
-
-
33645566839
-
Characterizing phosphoproteins and phosphoproteomes using mass spectrometry. Brief. Funct. Genomics and Proteomics
-
Goshe, M.B. 2006. Characterizing phosphoproteins and phosphoproteomes using mass spectrometry. Brief. Funct. Genomics and Proteomics 4:363-376.
-
(2006)
, vol.4
, pp. 363-376
-
-
Goshe, M.B.1
-
4
-
-
34248383337
-
Two-dimensional gel analysis of posttranslational modifications
-
J.E. Celis Ed, Academic Press, New York
-
Patterson, S.D. and J.I. Garrels. 1994. Two-dimensional gel analysis of posttranslational modifications, p. 249-257. In J.E. Celis (Ed.), Cell Biology: A Laboratory Handbook. Academic Press, New York.
-
(1994)
Cell Biology: A Laboratory Handbook
, pp. 249-257
-
-
Patterson, S.D.1
Garrels, J.I.2
-
6
-
-
0040113635
-
Simultaneous analysis of phosphoproteins and total cellular proteins from PC12 cells
-
Harrington, M.G., L. Hood, and C. Puckett. 1991. Simultaneous analysis of phosphoproteins and total cellular proteins from PC12 cells. Methods: Companion Methods Enzymol. 3:135-141.
-
(1991)
Methods: Companion Methods Enzymol
, vol.3
, pp. 135-141
-
-
Harrington, M.G.1
Hood, L.2
Puckett, C.3
-
7
-
-
0027133538
-
Evaluation of storage phosphor imaging for quantitative analysis of 2-D gels using the Quest II system
-
Patterson, S.D. and G.I. Latter. 1993. Evaluation of storage phosphor imaging for quantitative analysis of 2-D gels using the Quest II system. BioTechniques 15:1076-1083.
-
(1993)
BioTechniques
, vol.15
, pp. 1076-1083
-
-
Patterson, S.D.1
Latter, G.I.2
-
8
-
-
0024513231
-
Phosphoamino acid analysis of protein immoblized on polyvinylidene difluoride membrane
-
Hildebrandt, E. and V.A. Fried. 1989. Phosphoamino acid analysis of protein immoblized on polyvinylidene difluoride membrane. Anal. Biochem. 177:407-412.
-
(1989)
Anal. Biochem
, vol.177
, pp. 407-412
-
-
Hildebrandt, E.1
Fried, V.A.2
-
9
-
-
0025998840
-
Phosphopeptide mapping and phosphoamino acid analysis by two-dimensional separation on thin-layer cellulose plates
-
Boyle, W.J., P. van der Geer, and T. Hunter. 1991. Phosphopeptide mapping and phosphoamino acid analysis by two-dimensional separation on thin-layer cellulose plates. Methods Enzymol. 201:110-149.
-
(1991)
Methods Enzymol
, vol.201
, pp. 110-149
-
-
Boyle, W.J.1
van der Geer, P.2
Hunter, T.3
-
10
-
-
8544233570
-
Protein kinase C Theta inhibits insulin signaling by phosphorylating IRS1 at Ser(1101)
-
Li, Y., T.J. Soos, X. Li, J. Wu, M. Degennaro, X. Sun, D.R. Littman, M.J. Birnbaum, and R.D. Polakiewicz. 2004. Protein kinase C Theta inhibits insulin signaling by phosphorylating IRS1 at Ser(1101). J. Biol. Chem. 279:45304-45307.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 45304-45307
-
-
Li, Y.1
Soos, T.J.2
Li, X.3
Wu, J.4
Degennaro, M.5
Sun, X.6
Littman, D.R.7
Birnbaum, M.J.8
Polakiewicz, R.D.9
-
11
-
-
0027168907
-
Identification of the major phosphorylation sites of the Raf-1 kinase
-
Morrison, D.K., G. Heidecker, U.R. Rapp, and T.D. Copeland. 1993. Identification of the major phosphorylation sites of the Raf-1 kinase. J. Biol. Chem. 268:17309-17316.
-
(1993)
J. Biol. Chem
, vol.268
, pp. 17309-17316
-
-
Morrison, D.K.1
Heidecker, G.2
Rapp, U.R.3
Copeland, T.D.4
-
12
-
-
0001878525
-
Mass spectrometry-based methods for protein identification and phosphorylation site analysis
-
S.R. Pennington and M.J. Dunn Eds, BIOS Scientific Publishers, Oxford, UK
-
Patterson, S.D., R. Aebersold, and D.R. Goodlett. 2001. Mass spectrometry-based methods for protein identification and phosphorylation site analysis, p. 87-130. In S.R. Pennington and M.J. Dunn (Eds.), Proteomics: From Protein Sequence to Function. BIOS Scientific Publishers, Oxford, UK.
-
(2001)
Proteomics: From Protein Sequence to Function
, pp. 87-130
-
-
Patterson, S.D.1
Aebersold, R.2
Goodlett, D.R.3
-
13
-
-
0001810338
-
Current problems and technical solutions in protein biochemistry
-
R.H. Angeletti Ed, Academic Press, San Diego, CA
-
Aebersold, R. and S.D. Patterson. 1998. Current problems and technical solutions in protein biochemistry, p. 3-120. In R.H. Angeletti (Ed.), Proteins: Analysis & Design. Academic Press, San Diego, CA.
-
(1998)
Proteins: Analysis & Design
, pp. 3-120
-
-
Aebersold, R.1
Patterson, S.D.2
-
14
-
-
34248335169
-
Proteomic analysis of p38alpha mitogen-activated protein kinase-regulated changes in membrane fractions of RAS-transformed fibroblasts
-
Alfonso, P., I. Dolado, A. Swat, A. Nunez, A. Cuadrado, A.R. Nebreda, and J.I. Casal. 2006. Proteomic analysis of p38alpha mitogen-activated protein kinase-regulated changes in membrane fractions of RAS-transformed fibroblasts. Proteomics 6:S262-S271.
-
(2006)
Proteomics
, vol.6
-
-
Alfonso, P.1
Dolado, I.2
Swat, A.3
Nunez, A.4
Cuadrado, A.5
Nebreda, A.R.6
Casal, J.I.7
-
15
-
-
29144440954
-
Global analysis of the Hortaea werneckii proteome: Studying steroid response in yeast
-
Matis, M., M. Zakelj-Mavric, and J. Peter-Katalinic. 2005. Global analysis of the Hortaea werneckii proteome: studying steroid response in yeast. J. Proteome Res. 4:2043-2051.
-
(2005)
J. Proteome Res
, vol.4
, pp. 2043-2051
-
-
Matis, M.1
Zakelj-Mavric, M.2
Peter-Katalinic, J.3
-
16
-
-
15944413138
-
Identification of dynamic proteome changes upon ligand activation of Trk-receptors using two-dimensional fluorescence difference gel electrophoresis and mass spectrometry
-
Sitek, B., O. Apostolov, K. Stuhler, K. Pfeiffer, H.E. Meyer, A. Eggert, and A. Schramm. 2005. Identification of dynamic proteome changes upon ligand activation of Trk-receptors using two-dimensional fluorescence difference gel electrophoresis and mass spectrometry. Mol. Cell. Proteomics 4:291-299.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 291-299
-
-
Sitek, B.1
Apostolov, O.2
Stuhler, K.3
Pfeiffer, K.4
Meyer, H.E.5
Eggert, A.6
Schramm, A.7
-
17
-
-
4744350841
-
Proteomic identification of Bcl2-associated athanogene 2 as a novel MAPK-activated protein kinase 2 substrate
-
Ueda, K., H. Kosako, Y. Fukui, and S. Hattori. 2004. Proteomic identification of Bcl2-associated athanogene 2 as a novel MAPK-activated protein kinase 2 substrate. J. Biol. Chem. 279:41815-41821.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 41815-41821
-
-
Ueda, K.1
Kosako, H.2
Fukui, Y.3
Hattori, S.4
-
18
-
-
3242683662
-
Single cell profiling of potentiated phospho-protein networks in cancer cells
-
Irish, J.M., R. Hovland, P.O. Krutzik, O.D. Perez, O. Bruserud, B.T. Gjertsen, and G.P. Nolan. 2004. Single cell profiling of potentiated phospho-protein networks in cancer cells. Cell 118:217-228.
-
(2004)
Cell
, vol.118
, pp. 217-228
-
-
Irish, J.M.1
Hovland, R.2
Krutzik, P.O.3
Perez, O.D.4
Bruserud, O.5
Gjertsen, B.T.6
Nolan, G.P.7
-
19
-
-
0037435030
-
Mass spectrometry-based proteomics
-
Aebersold, R. and M. Mann. 2003. Mass spectrometry-based proteomics. Nature 422:198-207.
-
(2003)
Nature
, vol.422
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
20
-
-
4544347338
-
How much of the proteome do we see with discovery-based proteomics methods and how much do we need to see? Current
-
Patterson, S.D. 2004. How much of the proteome do we see with discovery-based proteomics methods and how much do we need to see? Current Proteomics 1:3-12.
-
(2004)
Proteomics
, vol.1
, pp. 3-12
-
-
Patterson, S.D.1
-
21
-
-
0037370373
-
Proteomics: The first decade and beyond
-
Patterson, S.D. and R.H. Aebersold. 2003. Proteomics: the first decade and beyond. Nat. Genet. 33:311-323.
-
(2003)
Nat. Genet
, vol.33
, pp. 311-323
-
-
Patterson, S.D.1
Aebersold, R.H.2
-
22
-
-
43249103655
-
Mass spectrometry: M/z 1983-2008.
-
Zhou, M. and T.D. Veenstra. 2008 Mass spectrometry: m/z 1983-2008. BioTechniques. 44:667-670.
-
(2008)
BioTechniques
, vol.44
, pp. 667-670
-
-
Zhou, M.1
Veenstra, T.D.2
-
23
-
-
0043192615
-
Proteomics: Evolution of the technology
-
Patterson, S.D. 2003. Proteomics: evolution of the technology. BioTechniques 35:440-444.
-
(2003)
BioTechniques
, vol.35
, pp. 440-444
-
-
Patterson, S.D.1
-
24
-
-
30544452187
-
Mapping posttranslational modifications of proteins by MS-based selective detection: Application to phosphoproteomics
-
Carr, S.A., R.S. Annan, and M.J. Huddleston. 2005. Mapping posttranslational modifications of proteins by MS-based selective detection: application to phosphoproteomics. Methods Enzymol. 405:82-115.
-
(2005)
Methods Enzymol
, vol.405
, pp. 82-115
-
-
Carr, S.A.1
Annan, R.S.2
Huddleston, M.J.3
-
25
-
-
0030218817
-
Selective detection and sequencing of phosphopeptides at the femtomole level by mass spectrometry
-
Carr, S.A., M.J. Huddleston, and R.S. Annan. 1996. Selective detection and sequencing of phosphopeptides at the femtomole level by mass spectrometry. Anal. Biochem. 239:180-192.
-
(1996)
Anal. Biochem
, vol.239
, pp. 180-192
-
-
Carr, S.A.1
Huddleston, M.J.2
Annan, R.S.3
-
26
-
-
0035298820
-
Detection of tyrosine phosphorylated peptides by precursor ion scanning quadrupole TOF mass spectrometry in positive ion mode
-
Steen, H., B. Kuster, M. Fernandez, A. Pandey, and M. Mann. 2001. Detection of tyrosine phosphorylated peptides by precursor ion scanning quadrupole TOF mass spectrometry in positive ion mode. Anal. Chem. 73:1440-1448.
-
(2001)
Anal. Chem
, vol.73
, pp. 1440-1448
-
-
Steen, H.1
Kuster, B.2
Fernandez, M.3
Pandey, A.4
Mann, M.5
-
27
-
-
0027277098
-
On target with a new mechanism for the regulation of protein phosphorylation
-
Hubbard, M.J. and P. Cohen. 1993. On target with a new mechanism for the regulation of protein phosphorylation. Trends Biochem. Sci. 18:172-177.
-
(1993)
Trends Biochem. Sci
, vol.18
, pp. 172-177
-
-
Hubbard, M.J.1
Cohen, P.2
-
28
-
-
0000109995
-
Transforming gene product of Rous sarcoma virus phosphorylates tyrosine
-
Hunter, T. and B.M. Sefton. 1980. Transforming gene product of Rous sarcoma virus phosphorylates tyrosine. Proc. Natl. Acad. Sci. USA 77:1311-1315.
-
(1980)
Proc. Natl. Acad. Sci. USA
, vol.77
, pp. 1311-1315
-
-
Hunter, T.1
Sefton, B.M.2
-
29
-
-
0023649672
-
Activation and suppression of pp60c-src transforming ability by mutation of its primary sites of tyrosine phosphorylation
-
Kmiecik, T.E. and D. Shalloway. 1987. Activation and suppression of pp60c-src transforming ability by mutation of its primary sites of tyrosine phosphorylation. Cell 49:65-73.
-
(1987)
Cell
, vol.49
, pp. 65-73
-
-
Kmiecik, T.E.1
Shalloway, D.2
-
30
-
-
0037458030
-
Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry
-
Salomon, A.R., S.B. Ficarro, L.M. Brill, A. Brinker, Q.T. Phung, C. Ericson, K. Sauer, A. Brock, et al. 2003. Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry. Proc. Natl. Acad. Sci. USA 100:443-448.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 443-448
-
-
Salomon, A.R.1
Ficarro, S.B.2
Brill, L.M.3
Brinker, A.4
Phung, Q.T.5
Ericson, C.6
Sauer, K.7
Brock, A.8
-
31
-
-
0033565503
-
Immobilized gallium(III) affinity chromatography of phosphopeptides
-
Posewitz, M.C. and P. Tempst. 1999. Immobilized gallium(III) affinity chromatography of phosphopeptides. Anal. Chem. 71:2883-2892.
-
(1999)
Anal. Chem
, vol.71
, pp. 2883-2892
-
-
Posewitz, M.C.1
Tempst, P.2
-
32
-
-
0036198435
-
Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae
-
Ficarro, S.B., M.L. McCleland, P.T. Stukenberg, D.J. Burke, M.M. Ross, J. Shabanowitz, D.F. Hunt, and F.M. White. 2002. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. Nat. Biotechnol. 20:301-305.
-
(2002)
Nat. Biotechnol
, vol.20
, pp. 301-305
-
-
Ficarro, S.B.1
McCleland, M.L.2
Stukenberg, P.T.3
Burke, D.J.4
Ross, M.M.5
Shabanowitz, J.6
Hunt, D.F.7
White, F.M.8
-
33
-
-
1442284524
-
Quantitation of phosphopeptides using affinity chromatography and stable isotope labeling
-
He, T., K. Alving, B. Feild, J. Norton, E.G. Joseloff, S.D. Patterson, and B. Domon. 2004. Quantitation of phosphopeptides using affinity chromatography and stable isotope labeling. J. Am. Soc. Mass Spectrom. 15:363-373.
-
(2004)
J. Am. Soc. Mass Spectrom
, vol.15
, pp. 363-373
-
-
He, T.1
Alving, K.2
Feild, B.3
Norton, J.4
Joseloff, E.G.5
Patterson, S.D.6
Domon, B.7
-
34
-
-
3242688830
-
Selective isolation at the femtomole level of phosphopeptides from proteolytic digests using 2D-NanoLC-ESI-MS/MS and titanium oxide precolumns
-
Pinkse, M.W., P.M. Uitto, M.J. Hilhorst, B. Ooms, and A.J. Heck. 2004. Selective isolation at the femtomole level of phosphopeptides from proteolytic digests using 2D-NanoLC-ESI-MS/MS and titanium oxide precolumns. Anal. Chem. 76:3935-3943.
-
(2004)
Anal. Chem
, vol.76
, pp. 3935-3943
-
-
Pinkse, M.W.1
Uitto, P.M.2
Hilhorst, M.J.3
Ooms, B.4
Heck, A.J.5
-
35
-
-
24944519450
-
Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns
-
Larsen, M.R., T.E. Thingholm, O.N. Jensen, P. Roepstorff, and T.J. Jorgensen. 2005. Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns. Mol. Cell. Proteomics 4:873-886.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 873-886
-
-
Larsen, M.R.1
Thingholm, T.E.2
Jensen, O.N.3
Roepstorff, P.4
Jorgensen, T.J.5
-
36
-
-
4344574540
-
Large-scale characterization of HeLa cell nuclear phosphoproteins
-
Beausoleil, S.A., M. Jedrychowski, D. Schwartz, J.E. Elias, J. Villen, J. Li, M.A. Cohn, L.C. Cantley, et al. 2004. Large-scale characterization of HeLa cell nuclear phosphoproteins. Proc. Natl. Acad. Sci. USA 101:12130-12135.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 12130-12135
-
-
Beausoleil, S.A.1
Jedrychowski, M.2
Schwartz, D.3
Elias, J.E.4
Villen, J.5
Li, J.6
Cohn, M.A.7
Cantley, L.C.8
-
37
-
-
15944377809
-
Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway
-
Gruhler, A., J.V. Olsen, S. Mohammed, P. Mortensen, N.J. Faergeman, M. Mann, and O.N. Jensen. 2005. Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway. Mol. Cell. Proteomics 4:310-327.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 310-327
-
-
Gruhler, A.1
Olsen, J.V.2
Mohammed, S.3
Mortensen, P.4
Faergeman, N.J.5
Mann, M.6
Jensen, O.N.7
-
38
-
-
0026338542
-
Determination of the tyrosine phosphorylation sites of the nicotinic acetylcholine receptor
-
Wagner, K., K. Edson, L. Heginbotham, M. Post, R.L. Huganir, and A.J. Czernik. 1991. Determination of the tyrosine phosphorylation sites of the nicotinic acetylcholine receptor. J. Biol. Chem. 266:23784-23789.
-
(1991)
J. Biol. Chem
, vol.266
, pp. 23784-23789
-
-
Wagner, K.1
Edson, K.2
Heginbotham, L.3
Post, M.4
Huganir, R.L.5
Czernik, A.J.6
-
39
-
-
0029558408
-
In vitro phosphorylation of the epidermal growth factor receptor autophosphorylation domain by c-src: Identification of phosphorylation sites and c-src SH2 domain binding sites
-
Lombardo, C.R., T.G. Consler, and D.B. Kassel. 1995. In vitro phosphorylation of the epidermal growth factor receptor autophosphorylation domain by c-src: identification of phosphorylation sites and c-src SH2 domain binding sites. Biochemistry 34:16456-16466.
-
(1995)
Biochemistry
, vol.34
, pp. 16456-16466
-
-
Lombardo, C.R.1
Consler, T.G.2
Kassel, D.B.3
-
40
-
-
0028541590
-
Protein epitope mapping by mass spectrometry
-
Zhao, Y. and B.T. Chait. 1994. Protein epitope mapping by mass spectrometry. Anal. Chem. 66:3723-3726.
-
(1994)
Anal. Chem
, vol.66
, pp. 3723-3726
-
-
Zhao, Y.1
Chait, B.T.2
-
41
-
-
0032898117
-
Identification of Tyr438 as the major in vitro c-Src phosphorylation site in human gelsolin: A mass spectrometric approach
-
De Corte, V., H. Demol, M. Goethals, J. Van Damme, J. Gettemans, and J. Vandekerckhove. 1999. Identification of Tyr438 as the major in vitro c-Src phosphorylation site in human gelsolin: a mass spectrometric approach. Protein Sci. 8:234-241.
-
(1999)
Protein Sci
, vol.8
, pp. 234-241
-
-
De Corte, V.1
Demol, H.2
Goethals, M.3
Van Damme, J.4
Gettemans, J.5
Vandekerckhove, J.6
-
42
-
-
21144458164
-
Immunoaffinity profiling of tyrosine phosphorylation in cancer cells
-
Rush, J., A. Moritz, K.A. Lee, A. Guo, V.L. Goss, E.J. Spek, H. Zhang, X.M. Zha, et al. 2005. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. Nat. Biotechnol. 23:94-101.
-
(2005)
Nat. Biotechnol
, vol.23
, pp. 94-101
-
-
Rush, J.1
Moritz, A.2
Lee, K.A.3
Guo, A.4
Goss, V.L.5
Spek, E.J.6
Zhang, H.7
Zha, X.M.8
-
43
-
-
0035356565
-
Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analyses
-
Goshe, M.B., T.P. Conrads, E.A. Panisko, N.H. Angell, T.D. Veenstra, and R.D. Smith. 2001. Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analyses. Anal. Chem. 73:2578-2586.
-
(2001)
Anal. Chem
, vol.73
, pp. 2578-2586
-
-
Goshe, M.B.1
Conrads, T.P.2
Panisko, E.A.3
Angell, N.H.4
Veenstra, T.D.5
Smith, R.D.6
-
44
-
-
0348014634
-
Improved beta-elimination-based affinity purification strategy for enrichment of phosphopeptides
-
McLachlin, D.T. and B.T. Chait. 2003. Improved beta-elimination-based affinity purification strategy for enrichment of phosphopeptides. Anal. Chem. 75:6826-6836.
-
(2003)
Anal. Chem
, vol.75
, pp. 6826-6836
-
-
McLachlin, D.T.1
Chait, B.T.2
-
45
-
-
0142040631
-
Phosphoprotein isotope-coded solid-phase tag approach for enrichment and quantitative analysis of phosphopeptides from complex mixtures
-
Qian, W.J., M.B. Goshe, D.G. Camp II, L.R. Yu, K. Tang, and R.D. Smith. 2003. Phosphoprotein isotope-coded solid-phase tag approach for enrichment and quantitative analysis of phosphopeptides from complex mixtures. Anal. Chem. 75:5441-5450.
-
(2003)
Anal. Chem
, vol.75
, pp. 5441-5450
-
-
Qian, W.J.1
Goshe, M.B.2
Camp II, D.G.3
Yu, L.R.4
Tang, K.5
Smith, R.D.6
-
46
-
-
0029156626
-
Mass spectrometric analysis of 21 phosphorylation sites in the internal repeat of rat profilaggrin, precursor of an intermediate filament associated protein
-
Resing, K.A., R.S. Johnson, and K.A. Walsh. 1995. Mass spectrometric analysis of 21 phosphorylation sites in the internal repeat of rat profilaggrin, precursor of an intermediate filament associated protein. Biochemistry 34:9477-9487.
-
(1995)
Biochemistry
, vol.34
, pp. 9477-9487
-
-
Resing, K.A.1
Johnson, R.S.2
Walsh, K.A.3
-
47
-
-
0038337889
-
Characterization of protein phosphorylation by mass spectrometry using immobilized metal ion affinity chromatography with on-resin beta-elimination and Michael addition
-
Thompson, A.J., S.R. Hart, C. Franz, K. Barnouin, A. Ridley, and R. Cramer. 2003. Characterization of protein phosphorylation by mass spectrometry using immobilized metal ion affinity chromatography with on-resin beta-elimination and Michael addition. Anal. Chem. 75:3232-3243.
-
(2003)
Anal. Chem
, vol.75
, pp. 3232-3243
-
-
Thompson, A.J.1
Hart, S.R.2
Franz, C.3
Barnouin, K.4
Ridley, A.5
Cramer, R.6
-
48
-
-
0033827629
-
Comparative quantification and identification of phosphoproteins using stable isotope labeling and liquid chromatography/mass spectrometry
-
Weckwerth, W., L. Willmitzer, and O. Fiehn. 2000. Comparative quantification and identification of phosphoproteins using stable isotope labeling and liquid chromatography/mass spectrometry. Rapid Commun. Mass Spectrom. 14:1677-1681.
-
(2000)
Rapid Commun. Mass Spectrom
, vol.14
, pp. 1677-1681
-
-
Weckwerth, W.1
Willmitzer, L.2
Fiehn, O.3
-
49
-
-
0034845380
-
Phosphopeptide analysis by positive and negative ion matrix-assisted laser desorption/ionization mass spectrometry
-
Janek, K., H. Wenschuh, M. Bienert, and E. Krause. 2001. Phosphopeptide analysis by positive and negative ion matrix-assisted laser desorption/ionization mass spectrometry. Rapid Commun. Mass Spectrom. 15:1593-1599.
-
(2001)
Rapid Commun. Mass Spectrom
, vol.15
, pp. 1593-1599
-
-
Janek, K.1
Wenschuh, H.2
Bienert, M.3
Krause, E.4
-
50
-
-
0036127198
-
Mass spectrometric analysis of the kinetics of in vivo rhodopsin phosphorylation
-
Lee, K.A., K.B. Craven, G.A. Niemi, and J.B. Hurley. 2002. Mass spectrometric analysis of the kinetics of in vivo rhodopsin phosphorylation. Protein Sci. 11:862-874.
-
(2002)
Protein Sci
, vol.11
, pp. 862-874
-
-
Lee, K.A.1
Craven, K.B.2
Niemi, G.A.3
Hurley, J.B.4
-
51
-
-
14744299376
-
The role of electron capture dissociation in biomolecular analysis
-
Cooper, H.J., K. Hakansson, and A.G. Marshall. 2005. The role of electron capture dissociation in biomolecular analysis. Mass Spectrom. Rev. 24:201-222.
-
(2005)
Mass Spectrom. Rev
, vol.24
, pp. 201-222
-
-
Cooper, H.J.1
Hakansson, K.2
Marshall, A.G.3
-
52
-
-
19444383866
-
Electron transfer dissociation of peptide anions
-
Coon, J.J., J. Shabanowitz, D.F. Hunt, and J.E. Syka. 2005. Electron transfer dissociation of peptide anions. J. Am. Soc. Mass Spectrom. 16:880-882.
-
(2005)
J. Am. Soc. Mass Spectrom
, vol.16
, pp. 880-882
-
-
Coon, J.J.1
Shabanowitz, J.2
Hunt, D.F.3
Syka, J.E.4
-
53
-
-
3042789073
-
Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry
-
Syka, J.E., J.J. Coon, M.J. Schroeder, J. Shabanowitz, and D.F. Hunt. 2004. Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry. Proc. Natl. Acad. Sci. USA 101:9528-9533.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 9528-9533
-
-
Syka, J.E.1
Coon, J.J.2
Schroeder, M.J.3
Shabanowitz, J.4
Hunt, D.F.5
-
54
-
-
18444391517
-
Shotgun identification of protein modifications from protein complexes and lens tissue
-
MacCoss, M.J., W.H. McDonald, A. Saraf, R. Sadygov, J.M. Clark, J.J. Tasto, K.L. Gould, D. Wolters, et al. 2002. Shotgun identification of protein modifications from protein complexes and lens tissue. Proc. Natl. Acad. Sci. USA 99:7900-7905.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7900-7905
-
-
MacCoss, M.J.1
McDonald, W.H.2
Saraf, A.3
Sadygov, R.4
Clark, J.M.5
Tasto, J.J.6
Gould, K.L.7
Wolters, D.8
-
55
-
-
24944544077
-
Precise and parallel characterization of coding polymorphisms, alternative splicing, and modifications in human proteins by mass spectrometry
-
Roth, M.J., A.J. Forbes, M.T. Boyne II, Y.B. Kim, D.E. Robinson, and N.L. Kelleher. 2005. Precise and parallel characterization of coding polymorphisms, alternative splicing, and modifications in human proteins by mass spectrometry. Mol. Cell. Proteomics 4:1002-1008.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1002-1008
-
-
Roth, M.J.1
Forbes, A.J.2
Boyne II, M.T.3
Kim, Y.B.4
Robinson, D.E.5
Kelleher, N.L.6
-
56
-
-
3242887156
-
ProSight PTM: An integrated environment for protein identification and characterization by top-down mass spectrometry
-
LeDuc, R.D., G.K. Taylor, Y.-B. Kim, T.E. Januszyk, L.H. Bynum, J.V. Sola, J.S. Garavelli, and N.L. Kelleher. 2004. ProSight PTM: an integrated environment for protein identification and characterization by top-down mass spectrometry. Nucleic Acids Res. 32:W340-W345.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
LeDuc, R.D.1
Taylor, G.K.2
Kim, Y.-B.3
Januszyk, T.E.4
Bynum, L.H.5
Sola, J.V.6
Garavelli, J.S.7
Kelleher, N.L.8
-
57
-
-
33745686436
-
Probabilistic enrichment of phosphopeptides by their mass defect
-
Bruce, C., M.A. Shifman, P. Miller, and E.E. Gulcicek. 2006. Probabilistic enrichment of phosphopeptides by their mass defect. Anal. Chem. 78:4374-4382.
-
(2006)
Anal. Chem
, vol.78
, pp. 4374-4382
-
-
Bruce, C.1
Shifman, M.A.2
Miller, P.3
Gulcicek, E.E.4
-
58
-
-
31344448066
-
Guidelines for the next 10 years of proteomics
-
Wilkins, M.R., R.D. Appel, J.E. Van Eyk, M.C. Chung, A. Gorg, M. Hecker, L.A. Huber, H. Langen, et al. 2006. Guidelines for the next 10 years of proteomics. Proteomics 6:4-8.
-
(2006)
Proteomics
, vol.6
, pp. 4-8
-
-
Wilkins, M.R.1
Appel, R.D.2
Van Eyk, J.E.3
Chung, M.C.4
Gorg, A.5
Hecker, M.6
Huber, L.A.7
Langen, H.8
-
59
-
-
43249118392
-
Quantitation of phosphoprotein biomarkers associated with inflammatory disease in whole blood
-
Means, G.D. 2007. Quantitation of phosphoprotein biomarkers associated with inflammatory disease in whole blood. American Drug Discovery 2:24-28.
-
(2007)
American Drug Discovery
, vol.2
, pp. 24-28
-
-
Means, G.D.1
-
60
-
-
0028819507
-
Quantitation of cellular receptors by a new immunocytochemical flow cytometry technique
-
Zagursky, R.J., D. Sharp, K.A. Solomon, and A. Schwartz. 1995. Quantitation of cellular receptors by a new immunocytochemical flow cytometry technique. BioTechniques 18:504-509.
-
(1995)
BioTechniques
, vol.18
, pp. 504-509
-
-
Zagursky, R.J.1
Sharp, D.2
Solomon, K.A.3
Schwartz, A.4
-
61
-
-
0029916201
-
Detection of apoptosis at the single-cell level by direct incorporation of fluorescein-dUTP in DNA strand breaks
-
Piqueras, B., B. Autran, P. Debre, and G. Gorochov. 1996. Detection of apoptosis at the single-cell level by direct incorporation of fluorescein-dUTP in DNA strand breaks. BioTechniques 20:634-640.
-
(1996)
BioTechniques
, vol.20
, pp. 634-640
-
-
Piqueras, B.1
Autran, B.2
Debre, P.3
Gorochov, G.4
-
62
-
-
38349043669
-
High-content single-cell drug screening with phosphospecific flow cytometry
-
Krutzik, P.O., J.M. Crane, M.R. Clutter, and G.P. Nolan. 2008. High-content single-cell drug screening with phosphospecific flow cytometry. Nat. Chem. Biol. 4:132-142.
-
(2008)
Nat. Chem. Biol
, vol.4
, pp. 132-142
-
-
Krutzik, P.O.1
Crane, J.M.2
Clutter, M.R.3
Nolan, G.P.4
-
63
-
-
33845662657
-
A strategic view on the use of pharmacodynamic biomarkers in early clinical drug development
-
Severino, M.E., R.F. Dubose, and S.D. Patterson. 2006. A strategic view on the use of pharmacodynamic biomarkers in early clinical drug development. IDrugs 9:849-853.
-
(2006)
IDrugs
, vol.9
, pp. 849-853
-
-
Severino, M.E.1
Dubose, R.F.2
Patterson, S.D.3
-
64
-
-
43249091488
-
-
Covey, T., S. Mu, and C.J.M. Saris. 2005. Monitoring signal transduction in whole blood by flow cytometry, Abstract #LB531. FASEB Experimental Biology 2005. FASEB, San Diego, CA.
-
Covey, T., S. Mu, and C.J.M. Saris. 2005. Monitoring signal transduction in whole blood by flow cytometry, Abstract #LB531. FASEB Experimental Biology 2005. FASEB, San Diego, CA.
-
-
-
-
65
-
-
32044450268
-
Transcending the biomarker mindset: Deciphering disease mechanisms at the single cell level
-
Danna, E.A. and G.P. Nolan. 2006. Transcending the biomarker mindset: deciphering disease mechanisms at the single cell level. Curr. Opin. Chem. Biol. 10:20-27.
-
(2006)
Curr. Opin. Chem. Biol
, vol.10
, pp. 20-27
-
-
Danna, E.A.1
Nolan, G.P.2
-
66
-
-
1642463417
-
Analysis of protein phosphorylation and cellular signaling events by flow cytometry: Techniques and clinical applications
-
Krutzik, P.O., J.M. Irish, G.P. Nolan, and O.D. Perez. 2004. Analysis of protein phosphorylation and cellular signaling events by flow cytometry: techniques and clinical applications. Clin. Immunol. 110:206-221.
-
(2004)
Clin. Immunol
, vol.110
, pp. 206-221
-
-
Krutzik, P.O.1
Irish, J.M.2
Nolan, G.P.3
Perez, O.D.4
-
67
-
-
33645318725
-
Phospho-proteomic immune analysis by flow cytometry: From mechanism to translational medicine at the single-cell level
-
Perez, O.D. and G.P. Nolan. 2006. Phospho-proteomic immune analysis by flow cytometry: from mechanism to translational medicine at the single-cell level. Immunol. Rev. 270:208-228.
-
(2006)
Immunol. Rev
, vol.270
, pp. 208-228
-
-
Perez, O.D.1
Nolan, G.P.2
-
68
-
-
43249122563
-
Translation of protein biomarkers for clinical development
-
J.E. Van Eyk and M.J. Dunn Eds, WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany
-
McCaffery, I., V.D. Fitzpatrick, S.-W. Wang, J. Rossi, S.V. Suggs, H. Bao, J. Ferbas, and S.D. Patterson. 2008. Translation of protein biomarkers for clinical development, p. 633-651. In J.E. Van Eyk and M.J. Dunn (Eds.), Clinical Proteomics: From Diagnosis to Therapy. WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany.
-
(2008)
Clinical Proteomics: From Diagnosis to Therapy
, pp. 633-651
-
-
McCaffery, I.1
Fitzpatrick, V.D.2
Wang, S.-W.3
Rossi, J.4
Suggs, S.V.5
Bao, H.6
Ferbas, J.7
Patterson, S.D.8
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