메뉴 건너뛰기




Volumn 74, Issue 9, 2008, Pages 2604-2611

Rapid differentiation of phenotypically similar yeast species by single-strand conformation polymorphism analysis of ribosomal DNA

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; CONFORMATIONS; DNA SEQUENCES; FRAGRANCES; POLYMORPHISM;

EID: 43049129605     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.02223-07     Document Type: Article
Times cited : (22)

References (68)
  • 1
    • 0037390015 scopus 로고    scopus 로고
    • Single-stranded conformational polymorphism analysis using automated capillary array electrophoresis apparatuses
    • Baba, S., Y. Kukita, K. Higasa, T. Tahira, and K. Hayashi. 2003. Single-stranded conformational polymorphism analysis using automated capillary array electrophoresis apparatuses. BioTechniques 34:746-750.
    • (2003) BioTechniques , vol.34 , pp. 746-750
    • Baba, S.1    Kukita, Y.2    Higasa, K.3    Tahira, T.4    Hayashi, K.5
  • 2
    • 0033973054 scopus 로고    scopus 로고
    • Taxonomic relationships among the taxa in the Candida guilliermondii complex, as revealed by comparative electrophoretic karyotyping
    • Bai, F.-Y., H.-Y. Liang, and J.-H. Jia. 2000. Taxonomic relationships among the taxa in the Candida guilliermondii complex, as revealed by comparative electrophoretic karyotyping. Int. J. Syst. Evol. Microbiol. 50:417-422.
    • (2000) Int. J. Syst. Evol. Microbiol , vol.50 , pp. 417-422
    • Bai, F.-Y.1    Liang, H.-Y.2    Jia, J.-H.3
  • 3
    • 0035200609 scopus 로고    scopus 로고
    • Phylogenetic analysis of strains originally assigned to Bullera variabilis: Descriptions of Bullera pseudohuiaensis sp. nov., Bullera komagatae sp. nov. and Bullera pseudoschimicola sp. nov
    • Bai, F.-Y., M. Takashima, and T. Nakase. 2001. Phylogenetic analysis of strains originally assigned to Bullera variabilis: descriptions of Bullera pseudohuiaensis sp. nov., Bullera komagatae sp. nov. and Bullera pseudoschimicola sp. nov. Int. J. Syst. Evol. Microbiol. 51:2177-2187.
    • (2001) Int. J. Syst. Evol. Microbiol , vol.51 , pp. 2177-2187
    • Bai, F.-Y.1    Takashima, M.2    Nakase, T.3
  • 4
    • 0038293440 scopus 로고    scopus 로고
    • Bullera anomala sp. nov. and Bullera pseudovariabilis sp. nov., two new ballistoconidium-forming yeast species from Yunnan, China
    • Bai, F.-Y., M. Takashima, J.-H. Zhao, J.-H. Jia, and T. Nakase. 2003. Bullera anomala sp. nov. and Bullera pseudovariabilis sp. nov., two new ballistoconidium-forming yeast species from Yunnan, China. Antonie van Leeuwenhoek 83:257-263.
    • (2003) Antonie van Leeuwenhoek , vol.83 , pp. 257-263
    • Bai, F.-Y.1    Takashima, M.2    Zhao, J.-H.3    Jia, J.-H.4    Nakase, T.5
  • 5
    • 0020210930 scopus 로고
    • Ultrasensitive staining of nucleic acids with silver
    • Beidler, J. L., P. R. Hilliard, and R. L. Rill. 1982. Ultrasensitive staining of nucleic acids with silver. Anal. Biochem. 126:374-380.
    • (1982) Anal. Biochem , vol.126 , pp. 374-380
    • Beidler, J.L.1    Hilliard, P.R.2    Rill, R.L.3
  • 6
    • 15844383833 scopus 로고    scopus 로고
    • Gut feeling for yeasts
    • Boekhout, T. 2005. Gut feeling for yeasts. Nature 434:449-451.
    • (2005) Nature , vol.434 , pp. 449-451
    • Boekhout, T.1
  • 9
    • 0034130743 scopus 로고    scopus 로고
    • Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes
    • Chen, Y. C., J. D. Eisner, M. M. Kattar, S. L. Rassoulian-Barrett, K. Lafe, S. L. Yarfitz, A. P. Limaye, and B. T. Cookson. 2000. Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes. J. Clin. Microbiol. 38:2302-2310.
    • (2000) J. Clin. Microbiol , vol.38 , pp. 2302-2310
    • Chen, Y.C.1    Eisner, J.D.2    Kattar, M.M.3    Rassoulian-Barrett, S.L.4    Lafe, K.5    Yarfitz, S.L.6    Limaye, A.P.7    Cookson, B.T.8
  • 12
    • 11144358342 scopus 로고    scopus 로고
    • Identification of species of the genus Candida by analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers
    • de Llanos Frutos, R., M. T. Fernandez-Espinar, and A. Querol. 2004. Identification of species of the genus Candida by analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. Antonie van Leeuwenhoek 85:175-185.
    • (2004) Antonie van Leeuwenhoek , vol.85 , pp. 175-185
    • de Llanos Frutos, R.1    Fernandez-Espinar, M.T.2    Querol, A.3
  • 13
    • 33748541096 scopus 로고    scopus 로고
    • Microcoding and flow cytometry as a high-throughput fungal identification system for Malassezia species
    • Diaz, M. R., T. Boekhout, B. Theelen, M. Bovers, F. J. Cabañes, and J. W. Fell. 2006. Microcoding and flow cytometry as a high-throughput fungal identification system for Malassezia species. J. Med. Microbiol. 55:1197-1209.
    • (2006) J. Med. Microbiol , vol.55 , pp. 1197-1209
    • Diaz, M.R.1    Boekhout, T.2    Theelen, B.3    Bovers, M.4    Cabañes, F.J.5    Fell, J.W.6
  • 14
    • 0025831498 scopus 로고
    • Non-isotopic detection of single strand conformation polymorphism (PCR-SSCP): A rapid and sensitive technique in diagnosis of phenylketonuria
    • Dockhorn-Dworniczak, B., B. Dworniczak, L. Brömmelkamp, J. Bülles, J. Horst, and W. W. Böcker. 1991. Non-isotopic detection of single strand conformation polymorphism (PCR-SSCP): a rapid and sensitive technique in diagnosis of phenylketonuria. Nucleic Acids Res. 19:2500.
    • (1991) Nucleic Acids Res , vol.19 , pp. 2500
    • Dockhorn-Dworniczak, B.1    Dworniczak, B.2    Brömmelkamp, L.3    Bülles, J.4    Horst, J.5    Böcker, W.W.6
  • 15
    • 0031717334 scopus 로고    scopus 로고
    • Rapid identification of Candida species with species-specific DNA probes
    • Elie, C. M., T. J. Lott, E. Reiss, and C. J. Morrison. 1998. Rapid identification of Candida species with species-specific DNA probes. J. Clin. Microbiol. 36:3260-3265.
    • (1998) J. Clin. Microbiol , vol.36 , pp. 3260-3265
    • Elie, C.M.1    Lott, T.J.2    Reiss, E.3    Morrison, C.J.4
  • 16
    • 0032931479 scopus 로고    scopus 로고
    • Identification of yeasts by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers
    • Esteve-Zarzoso, B., C. Belloch, F. Uruburu, and A. Querol. 1999. Identification of yeasts by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. Int. J. Syst. Bacteriol. 49:329-337.
    • (1999) Int. J. Syst. Bacteriol , vol.49 , pp. 329-337
    • Esteve-Zarzoso, B.1    Belloch, C.2    Uruburu, F.3    Querol, A.4
  • 17
    • 0034115579 scopus 로고    scopus 로고
    • Biodiversity and systematics of basidiomycetous yeasts as determined by large-subunit rDNA D1/D2 domain sequence analysis
    • Fell, J. W., T. Boekhout, A. Fonseca, G. Scorzetti, and A. Statzell-Tallman. 2000. Biodiversity and systematics of basidiomycetous yeasts as determined by large-subunit rDNA D1/D2 domain sequence analysis. Int. J. Syst. Evol. Microbiol. 50:1351-1371.
    • (2000) Int. J. Syst. Evol. Microbiol , vol.50 , pp. 1351-1371
    • Fell, J.W.1    Boekhout, T.2    Fonseca, A.3    Scorzetti, G.4    Statzell-Tallman, A.5
  • 18
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 19
    • 0033826282 scopus 로고    scopus 로고
    • RFLP analysis of the ribosomal internal transcribed spacers and the 5.8S rRNA gene region of the genus Saccharomyces: A fast method for species identification and the differentiation of flor yeasts
    • Fernádez-Espinar, M. T., B. Esteve-Zarzoso, A. Querol, and E. Barrio. 2000. RFLP analysis of the ribosomal internal transcribed spacers and the 5.8S rRNA gene region of the genus Saccharomyces: a fast method for species identification and the differentiation of flor yeasts. Antonie van Leeuwenhoek 78:87-97.
    • (2000) Antonie van Leeuwenhoek , vol.78 , pp. 87-97
    • Fernádez-Espinar, M.T.1    Esteve-Zarzoso, B.2    Querol, A.3    Barrio, E.4
  • 20
    • 4644332478 scopus 로고    scopus 로고
    • Identification and typing of Malassezia species by amplified fragment length polymorphism and sequence analyses of the internal transcribed spacer and large-subunit regions of ribosomal DNA
    • Gupta, A. K., T. Boekhout, B. Theelen, R. Summerbell, and R. Batra. 2004. Identification and typing of Malassezia species by amplified fragment length polymorphism and sequence analyses of the internal transcribed spacer and large-subunit regions of ribosomal DNA. J. Clin. Microbiol. 42:4253-4260.
    • (2004) J. Clin. Microbiol , vol.42 , pp. 4253-4260
    • Gupta, A.K.1    Boekhout, T.2    Theelen, B.3    Summerbell, R.4    Batra, R.5
  • 21
    • 0026207465 scopus 로고
    • PCR-SSCP: A simple and sensitive method for detection of mutations in the genomic DNA
    • Hayashi, K. 1991. PCR-SSCP: a simple and sensitive method for detection of mutations in the genomic DNA. PCR Methods Appl. 1:34-38.
    • (1991) PCR Methods Appl , vol.1 , pp. 34-38
    • Hayashi, K.1
  • 22
    • 0027434131 scopus 로고
    • How sensitive is PCR-SSCP?
    • Hayashi, K., and D. W. Yandell. 1993. How sensitive is PCR-SSCP? Hum. Mutat. 2:338-346.
    • (1993) Hum. Mutat , vol.2 , pp. 338-346
    • Hayashi, K.1    Yandell, D.W.2
  • 23
    • 0345279870 scopus 로고    scopus 로고
    • Use of DNA toolbox for the characterization of mutation scanning methods. II. Evaluation of single-strand conformation polymorphism analysis
    • Highsmith, W. E., Jr., A. J. Nataraj, Q. Jin, J. M. O'Connor, S. H. El-Nabi, N. Kusukawa, and M. M. Garner. 1999. Use of DNA toolbox for the characterization of mutation scanning methods. II. Evaluation of single-strand conformation polymorphism analysis. Electrophoresis 20:1195-1203.
    • (1999) Electrophoresis , vol.20 , pp. 1195-1203
    • Highsmith Jr., W.E.1    Nataraj, A.J.2    Jin, Q.3    O'Connor, J.M.4    El-Nabi, S.H.5    Kusukawa, N.6    Garner, M.M.7
  • 24
    • 27744535455 scopus 로고    scopus 로고
    • Phylloplane yeasts from Portugal: Seven novel anamorphic species in the Tremellales lineage of the Hymenomycetes (Basidiomycota) producing orange-coloured colonies
    • Inácio, J., L. Portugal, I. Spencer-Martins, and A. Fonseca. 2005. Phylloplane yeasts from Portugal: seven novel anamorphic species in the Tremellales lineage of the Hymenomycetes (Basidiomycota) producing orange-coloured colonies. FEMS Yeast Res. 5:1167-1183.
    • (2005) FEMS Yeast Res , vol.5 , pp. 1167-1183
    • Inácio, J.1    Portugal, L.2    Spencer-Martins, I.3    Fonseca, A.4
  • 25
    • 33947249122 scopus 로고    scopus 로고
    • Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood
    • Innings, Å., M. Ullberg, A. Johansson, C. J. Rubin, N. Noreus, M. Isaksson, and B. Herrmann. 2007. Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood. J. Clin. Microbiol. 45:874-880.
    • (2007) J. Clin. Microbiol , vol.45 , pp. 874-880
    • Innings, A.1    Ullberg, M.2    Johansson, A.3    Rubin, C.J.4    Noreus, N.5    Isaksson, M.6    Herrmann, B.7
  • 26
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 27
    • 0041666538 scopus 로고    scopus 로고
    • Single-strand-conformation polymorphism of ribosomal DNA for rapid species differentiation in genus Phytophthora
    • Kong, P., C. Hong, P. A. Richardson, and M. E. Gallegly. 2003. Single-strand-conformation polymorphism of ribosomal DNA for rapid species differentiation in genus Phytophthora. Fungal Genet. Biol. 39:238-249.
    • (2003) Fungal Genet. Biol , vol.39 , pp. 238-249
    • Kong, P.1    Hong, C.2    Richardson, P.A.3    Gallegly, M.E.4
  • 28
    • 0029760862 scopus 로고    scopus 로고
    • Single-strand conformation polymorphism analysis of PCR-amplified ribosomal DNA internal transcribed spacers to differentiate species of Aspergillus section Flavi
    • Kumeda, Y., and T. Asao. 1996. Single-strand conformation polymorphism analysis of PCR-amplified ribosomal DNA internal transcribed spacers to differentiate species of Aspergillus section Flavi. Appl. Environ. Microbiol. 62:2947-2952.
    • (1996) Appl. Environ. Microbiol , vol.62 , pp. 2947-2952
    • Kumeda, Y.1    Asao, T.2
  • 29
    • 0344256533 scopus 로고    scopus 로고
    • Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora
    • Kurtzman, C. P. 2003. Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora. FEMS Yeast Res. 4:233-245.
    • (2003) FEMS Yeast Res , vol.4 , pp. 233-245
    • Kurtzman, C.P.1
  • 30
    • 84884867971 scopus 로고    scopus 로고
    • Definition, classification and nomenclature of the yeasts
    • C. P. Kurtzman and J. W. Fell ed, 4th ed. Elsevier, Amsterdam, The Netherlands
    • Kurtzman, C. P., and J. W. Fell. 1998. Definition, classification and nomenclature of the yeasts, p. 3-5. In C. P. Kurtzman and J. W. Fell (ed.), The yeasts, a taxonomic study, 4th ed. Elsevier, Amsterdam, The Netherlands.
    • (1998) The yeasts, a taxonomic study , pp. 3-5
    • Kurtzman, C.P.1    Fell, J.W.2
  • 31
    • 0030907763 scopus 로고    scopus 로고
    • Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5′ end of the large-subunit (26S) ribosomal DNA gene
    • Kurtzman, C. P., and C. J. Robnett. 1997. Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5′ end of the large-subunit (26S) ribosomal DNA gene. J. Clin. Microbiol. 35:1216-1223.
    • (1997) J. Clin. Microbiol , vol.35 , pp. 1216-1223
    • Kurtzman, C.P.1    Robnett, C.J.2
  • 32
    • 0031792246 scopus 로고    scopus 로고
    • Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences
    • Kurtzman, C. P., and C. J. Robnett. 1998. Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie van Leeuwenhoek 73:331-371.
    • (1998) Antonie van Leeuwenhoek , vol.73 , pp. 331-371
    • Kurtzman, C.P.1    Robnett, C.J.2
  • 33
    • 0037540048 scopus 로고    scopus 로고
    • Phylogenetic relationships among yeasts of the 'Saccharomyces complex' determined from multigene sequence analyses
    • Kurtzman, C. P., and C. J. Robnett. 2003. Phylogenetic relationships among yeasts of the 'Saccharomyces complex' determined from multigene sequence analyses. FEMS Yeast Res. 3:417-432.
    • (2003) FEMS Yeast Res , vol.3 , pp. 417-432
    • Kurtzman, C.P.1    Robnett, C.J.2
  • 34
    • 0002069169 scopus 로고    scopus 로고
    • Ecology and yeasts
    • C. P. Kurtzman and J. W. Fell ed, 4th ed. Elsevier, Amsterdam, The Netherlands
    • Lachance, M.-A., and W. T. Starmer. 1998. Ecology and yeasts, p. 21-30. In C. P. Kurtzman and J. W. Fell (ed.), The yeasts, a taxonomic study, 4th ed. Elsevier, Amsterdam, The Netherlands.
    • (1998) The yeasts, a taxonomic study , pp. 21-30
    • Lachance, M.-A.1    Starmer, W.T.2
  • 35
    • 0032982405 scopus 로고    scopus 로고
    • High-throughput single-strand conformation polymorphism analysis by automated capillary electrophoresis: Robust multiplex analysis and pattern-based identification of allelic variants
    • Larsen, L. A., M. Christiansen, J. Vuust, and P. S. Andersen. 1999. High-throughput single-strand conformation polymorphism analysis by automated capillary electrophoresis: robust multiplex analysis and pattern-based identification of allelic variants. Hum. Mutat. 13:318-327.
    • (1999) Hum. Mutat , vol.13 , pp. 318-327
    • Larsen, L.A.1    Christiansen, M.2    Vuust, J.3    Andersen, P.S.4
  • 36
    • 33644912365 scopus 로고    scopus 로고
    • Identification of medically important yeast species by sequence analysis of the internal transcribed spacer regions
    • Leaw, S. N., H. C. Chang, H. F. Sun, R. Barton, J.-P. Bouchara, and T. C. Chang. 2006. Identification of medically important yeast species by sequence analysis of the internal transcribed spacer regions. J. Clin. Microbiol. 44: 693-699.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 693-699
    • Leaw, S.N.1    Chang, H.C.2    Sun, H.F.3    Barton, R.4    Bouchara, J.-P.5    Chang, T.C.6
  • 37
    • 34547644612 scopus 로고    scopus 로고
    • Identification of medically important Candida and non-Candida yeast species by an oligonucleotide array
    • Leaw, S. N., H. C. Chang, R. Barton, J.-P. Bouchara, and T. C. Chang. 2007. Identification of medically important Candida and non-Candida yeast species by an oligonucleotide array. J. Clin. Microbiol. 45:2220-2229.
    • (2007) J. Clin. Microbiol , vol.45 , pp. 2220-2229
    • Leaw, S.N.1    Chang, H.C.2    Barton, R.3    Bouchara, J.-P.4    Chang, T.C.5
  • 38
    • 26944441639 scopus 로고    scopus 로고
    • Development of a DNA microarray for detection and identification of fungal pathogens involved in invasive mycoses
    • Leinberger, D. M., U. Schumacher, I. B. Autenrieth, and T. T. Bachmann. 2005. Development of a DNA microarray for detection and identification of fungal pathogens involved in invasive mycoses. J. Clin. Microbiol. 43:4943-4953.
    • (2005) J. Clin. Microbiol , vol.43 , pp. 4943-4953
    • Leinberger, D.M.1    Schumacher, U.2    Autenrieth, I.B.3    Bachmann, T.T.4
  • 39
    • 36549062092 scopus 로고    scopus 로고
    • Single-strand conformation polymorphism of microsatellite for rapid strain typing of Candida albicans
    • Li, J., and F.-Y. Bai. 2007. Single-strand conformation polymorphism of microsatellite for rapid strain typing of Candida albicans. Med. Mycol. 45: 629-635.
    • (2007) Med. Mycol , vol.45 , pp. 629-635
    • Li, J.1    Bai, F.-Y.2
  • 40
    • 33845571193 scopus 로고    scopus 로고
    • Candida pseudorugosa sp. nov., a novel yeast species from sputum
    • Li, J., Y.-C. Xu, and F.-Y. Bai. 2006. Candida pseudorugosa sp. nov., a novel yeast species from sputum. J. Clin. Microbiol. 44:4486-4490.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 4486-4490
    • Li, J.1    Xu, Y.-C.2    Bai, F.-Y.3
  • 42
    • 0036701671 scopus 로고    scopus 로고
    • Rapid identification of pathogenic fungi directly from cultures by using multiplex PCR
    • Luo, G., and T. G. Mitchell. 2002. Rapid identification of pathogenic fungi directly from cultures by using multiplex PCR. J. Clin. Microbiol. 40:2860-2865.
    • (2002) J. Clin. Microbiol , vol.40 , pp. 2860-2865
    • Luo, G.1    Mitchell, T.G.2
  • 43
    • 0028260525 scopus 로고
    • Detection of a wide range of medically important fungi by the polymerase chain reaction
    • Makimura, K., Y. S. Murayama, and H. Yamaguchi. 1994. Detection of a wide range of medically important fungi by the polymerase chain reaction. J. Med. Microbiol. 40:358-364.
    • (1994) J. Med. Microbiol , vol.40 , pp. 358-364
    • Makimura, K.1    Murayama, Y.S.2    Yamaguchi, H.3
  • 44
    • 1842638563 scopus 로고    scopus 로고
    • PCR-DGGE differentiation of strains of Saccharomyces sensu stricto
    • Manzano, M., L. Cocolin, B. Longo, and G. Comi. 2004. PCR-DGGE differentiation of strains of Saccharomyces sensu stricto. Antonie van Leeuwenhoek 85:23-27.
    • (2004) Antonie van Leeuwenhoek , vol.85 , pp. 23-27
    • Manzano, M.1    Cocolin, L.2    Longo, B.3    Comi, G.4
  • 45
    • 0031920186 scopus 로고    scopus 로고
    • Intergenic transcribed spacer PCR ribotyping for differentiation of Saccharomyces species and interspecific hybrids
    • McCullough, M. J., K. V. Clemons, J. H. McCusker, and D. A. Stevens. 1998. Intergenic transcribed spacer PCR ribotyping for differentiation of Saccharomyces species and interspecific hybrids. J. Clin. Microbiol. 36:1035-1038.
    • (1998) J. Clin. Microbiol , vol.36 , pp. 1035-1038
    • McCullough, M.J.1    Clemons, K.V.2    McCusker, J.H.3    Stevens, D.A.4
  • 46
    • 2142746406 scopus 로고    scopus 로고
    • Identification and population dynamics of yeasts in sourdough fermentation processes by PCR-denaturing gradient gel electrophoresis
    • Meroth, C. B., W. P. Hammes, and C. Hertel. 2003. Identification and population dynamics of yeasts in sourdough fermentation processes by PCR-denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 69:7453-7461.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 7453-7461
    • Meroth, C.B.1    Hammes, W.P.2    Hertel, C.3
  • 47
    • 0034481166 scopus 로고    scopus 로고
    • Expanding world of ballistosporous yeasts: Distribution in the phyllosphere, systematics and phylogeny
    • Nakase, T. 2000. Expanding world of ballistosporous yeasts: distribution in the phyllosphere, systematics and phylogeny. J. Gen. Appl. Microbiol. 46: 189-216.
    • (2000) J. Gen. Appl. Microbiol , vol.46 , pp. 189-216
    • Nakase, T.1
  • 48
    • 85159248655 scopus 로고    scopus 로고
    • Nataraj, A. J., I. Olivos-Glander, N. Kusukawa, and W. E. Highsmith, Jr. 1999. Single-strand conformation polymorphism and heteroduplex analysis for gel-based mutation detection. Electrophoresis 20:1177-1185.
    • Nataraj, A. J., I. Olivos-Glander, N. Kusukawa, and W. E. Highsmith, Jr. 1999. Single-strand conformation polymorphism and heteroduplex analysis for gel-based mutation detection. Electrophoresis 20:1177-1185.
  • 49
    • 0033814080 scopus 로고    scopus 로고
    • Three new species in the Saccharomyces sensu stricto complex: Saccharomyces cariocanus, Saccharomyces kudriavzevii and Saccharomyces mikatae
    • Naumov, G. I., S. A. James, E. S. Naumova, E. J. Louis, and I. N. Roberts. 2000. Three new species in the Saccharomyces sensu stricto complex: Saccharomyces cariocanus, Saccharomyces kudriavzevii and Saccharomyces mikatae. Int. J. Syst. Evol. Microbiol. 50:1931-1942.
    • (2000) Int. J. Syst. Evol. Microbiol , vol.50 , pp. 1931-1942
    • Naumov, G.I.1    James, S.A.2    Naumova, E.S.3    Louis, E.J.4    Roberts, I.N.5
  • 50
    • 0024595101 scopus 로고
    • Detection of polymorphisms of human DNA by gel electrophoresis as single strand conformation polymorphisms
    • Orita, M., H. Iwahana, H. Kanazawa, K. Hayashi, and T. Sekiya. 1989. Detection of polymorphisms of human DNA by gel electrophoresis as single strand conformation polymorphisms. Proc. Natl. Acad. Sci. USA 86:2766-2770.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 2766-2770
    • Orita, M.1    Iwahana, H.2    Kanazawa, H.3    Hayashi, K.4    Sekiya, T.5
  • 51
    • 0024756969 scopus 로고
    • Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction
    • Orita, M., Y. Suzuki, T. Sekiya, and K. Hayashi. 1989. Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. Genomics 5:874-879.
    • (1989) Genomics , vol.5 , pp. 874-879
    • Orita, M.1    Suzuki, Y.2    Sekiya, T.3    Hayashi, K.4
  • 52
    • 33748772568 scopus 로고    scopus 로고
    • Rapid identification of ascomycetous yeasts from clinical specimens by a molecular method based on flow cytometry and comparison with identifications from phenotypic assays
    • Page, B. T., C. E. Shields, W. G. Merz, and C. P. Kurtzman. 2006. Rapid identification of ascomycetous yeasts from clinical specimens by a molecular method based on flow cytometry and comparison with identifications from phenotypic assays. J. Clin. Microbiol. 44:3167-3171.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 3167-3171
    • Page, B.T.1    Shields, C.E.2    Merz, W.G.3    Kurtzman, C.P.4
  • 53
    • 5444272819 scopus 로고    scopus 로고
    • Rare and emerging opportunistic fungal pathogens: Concern for resistance beyond Candida albicans and Aspergillus fumigatus
    • Pfaller, M. A., and D. J. Diekema. 2004. Rare and emerging opportunistic fungal pathogens: concern for resistance beyond Candida albicans and Aspergillus fumigatus. J. Clin. Microbiol. 42:4419-4431.
    • (2004) J. Clin. Microbiol , vol.42 , pp. 4419-4431
    • Pfaller, M.A.1    Diekema, D.J.2
  • 54
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 55
    • 33947268285 scopus 로고    scopus 로고
    • Development of novel real-time PCR assays for detection and differentiation of eleven medically important Aspergillus and Candida species in clinical specimens
    • Schabereiter-Gurtner, C., B. Selitsch, M. L. Rotter, A. M. Hirschl, and B. Willinger. 2007. Development of novel real-time PCR assays for detection and differentiation of eleven medically important Aspergillus and Candida species in clinical specimens. J. Clin. Microbiol. 45:906-914.
    • (2007) J. Clin. Microbiol , vol.45 , pp. 906-914
    • Schabereiter-Gurtner, C.1    Selitsch, B.2    Rotter, M.L.3    Hirschl, A.M.4    Willinger, B.5
  • 56
    • 0036893398 scopus 로고    scopus 로고
    • Systematics of basidiomycetous yeasts: A comparison of large subunit D1/D2 and internal transcribed spacer rDNA regions
    • Scorzetti, G., J. W. Fell, A. Fonseca, and A. Statzell-Tallman. 2002. Systematics of basidiomycetous yeasts: a comparison of large subunit D1/D2 and internal transcribed spacer rDNA regions. FEMS Yeast Res. 2:495-517.
    • (2002) FEMS Yeast Res , vol.2 , pp. 495-517
    • Scorzetti, G.1    Fell, J.W.2    Fonseca, A.3    Statzell-Tallman, A.4
  • 57
    • 0027193630 scopus 로고
    • The sensitivity of single-strand conformation polymorphism analysis for the detection of single base substitutions
    • Sheffield, V. C., J. S. Beck, A. E. Kwitek, D. W. Sandstrom, and E. M. Stone. 1993. The sensitivity of single-strand conformation polymorphism analysis for the detection of single base substitutions. Genomics 16:325-332.
    • (1993) Genomics , vol.16 , pp. 325-332
    • Sheffield, V.C.1    Beck, J.S.2    Kwitek, A.E.3    Sandstrom, D.W.4    Stone, E.M.5
  • 58
    • 0032907183 scopus 로고    scopus 로고
    • Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification
    • Sugita, T., A. Nishikawa, R. Ikeda, and T. Shinoda. 1999. Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification. J. Clin. Microbiol. 37:1985-1993.
    • (1999) J. Clin. Microbiol , vol.37 , pp. 1985-1993
    • Sugita, T.1    Nishikawa, A.2    Ikeda, R.3    Shinoda, T.4
  • 59
    • 16444370369 scopus 로고    scopus 로고
    • The beetle gut: A hyperdiverse source of novel yeasts
    • Suh, S.-O., J. V. McHugh, D. D. Pollock, and M. Blackwell. 2005. The beetle gut: a hyperdiverse source of novel yeasts. Mycol. Res. 109:261-265.
    • (2005) Mycol. Res , vol.109 , pp. 261-265
    • Suh, S.-O.1    McHugh, J.V.2    Pollock, D.D.3    Blackwell, M.4
  • 60
    • 0035734587 scopus 로고    scopus 로고
    • Identification and typing of Malassezia yeasts using amplified fragment length polymorphism (AFLP), random amplified polymorphic DNA (RAPD) and denaturing gradient gel electrophoresis (DGGE)
    • Theelen, B., M. Silvestri, E. Guého, A. van Belkum, and T. Boekhout. 2001. Identification and typing of Malassezia yeasts using amplified fragment length polymorphism (AFLP), random amplified polymorphic DNA (RAPD) and denaturing gradient gel electrophoresis (DGGE). FEMS Yeast Res. 1:79-86.
    • (2001) FEMS Yeast Res , vol.1 , pp. 79-86
    • Theelen, B.1    Silvestri, M.2    Guého, E.3    van Belkum, A.4    Boekhout, T.5
  • 61
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 62
    • 0002137512 scopus 로고    scopus 로고
    • Saccharomyces Meyen ex Reess
    • C. P. Kurtzman and J. W. Fell ed, 4th ed. Elsevier, Amsterdam, The Netherlands
    • Vaughan-Martini, A., and A. Martini. 1998. Saccharomyces Meyen ex Reess, p. 358-371. In C. P. Kurtzman and J. W. Fell (ed.), The yeasts, a taxonomic study, 4th ed. Elsevier, Amsterdam, The Netherlands.
    • (1998) The yeasts, a taxonomic study , pp. 358-371
    • Vaughan-Martini, A.1    Martini, A.2
  • 63
    • 33747584876 scopus 로고    scopus 로고
    • Identification of species in the genus Pichia by restriction of the internal transcribed spacers (ITS1 and ITS2) and the 5.8S ribosomal DNA gene
    • Villa-Carvajal, M., A. Querol, and C. Belloch. 2006. Identification of species in the genus Pichia by restriction of the internal transcribed spacers (ITS1 and ITS2) and the 5.8S ribosomal DNA gene. Antonie van Leeuwenhoek 90:171-181.
    • (2006) Antonie van Leeuwenhoek , vol.90 , pp. 171-181
    • Villa-Carvajal, M.1    Querol, A.2    Belloch, C.3
  • 64
    • 0028786704 scopus 로고
    • PCR and single-strand conformational polymorphism for recognition of medically important opportunistic fungi
    • Walsh, T. J., A. Francesconi, M. Kasai, and S. J. Chanock. 1995. PCR and single-strand conformational polymorphism for recognition of medically important opportunistic fungi. J. Clin. Microbiol. 33:3216-3220.
    • (1995) J. Clin. Microbiol , vol.33 , pp. 3216-3220
    • Walsh, T.J.1    Francesconi, A.2    Kasai, M.3    Chanock, S.J.4
  • 65
    • 1642398969 scopus 로고    scopus 로고
    • Four new yeast species of the genus Sporobolomyces from plant leaves
    • Wang, Q.-M., and F.-Y. Bai. 2004. Four new yeast species of the genus Sporobolomyces from plant leaves. FEMS Yeast Res. 4:579-586.
    • (2004) FEMS Yeast Res , vol.4 , pp. 579-586
    • Wang, Q.-M.1    Bai, F.-Y.2
  • 66
    • 5444262923 scopus 로고    scopus 로고
    • Bullera cylindrica, Bullera hubeiensis and Bullera nakasei, ballistoconidium-forming yeast species isolated from plant leaves
    • Wang, Q.-M., F.-Y. Bai, H.-Z. Lu, J.-H. Jia, and M. Takashima. 2004. Bullera cylindrica, Bullera hubeiensis and Bullera nakasei, ballistoconidium-forming yeast species isolated from plant leaves. Int. J. Syst. Evol. Microbiol. 54: 1877-1882.
    • (2004) Int. J. Syst. Evol. Microbiol , vol.54 , pp. 1877-1882
    • Wang, Q.-M.1    Bai, F.-Y.2    Lu, H.-Z.3    Jia, J.-H.4    Takashima, M.5
  • 67
    • 39749202783 scopus 로고    scopus 로고
    • Saccharomyces arboricolus sp. nov., a yeast species from tree bark
    • Wang, S.-A., and F.-Y. Bai. 2008. Saccharomyces arboricolus sp. nov., a yeast species from tree bark. Int. J. Syst. Evol. Microbiol. 58:510-514.
    • (2008) Int. J. Syst. Evol. Microbiol , vol.58 , pp. 510-514
    • Wang, S.-A.1    Bai, F.-Y.2
  • 68
    • 0002243618 scopus 로고    scopus 로고
    • Methods for the isolation, maintenance and identification of yeasts
    • C. P. Kurtzman and J. W. Fell ed, 4th ed. Elsevier, Amsterdam, The Netherlands
    • Yarrow, D. 1998. Methods for the isolation, maintenance and identification of yeasts, p. 77-100. In C. P. Kurtzman and J. W. Fell (ed.), The yeasts, a taxonomic study, 4th ed. Elsevier, Amsterdam, The Netherlands.
    • (1998) The yeasts, a taxonomic study , pp. 77-100
    • Yarrow, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.