-
1
-
-
0030030902
-
The eve stripe 2 enhancer employs multiple modes of transcriptional synergy
-
Arnosti D.N., Barolo S., Levine M., and Small S. The eve stripe 2 enhancer employs multiple modes of transcriptional synergy. Development 122 (1996) 205-214
-
(1996)
Development
, vol.122
, pp. 205-214
-
-
Arnosti, D.N.1
Barolo, S.2
Levine, M.3
Small, S.4
-
3
-
-
15744394192
-
Transcriptional regulation by the numbers: models
-
Bintu L., Buchler N.E., Garcia H.G., Gerland U., Hwa T., Kondev J., and Phillips R. Transcriptional regulation by the numbers: models. Curr. Opin. Genet. Dev. 15 (2004) 116-124
-
(2004)
Curr. Opin. Genet. Dev.
, vol.15
, pp. 116-124
-
-
Bintu, L.1
Buchler, N.E.2
Garcia, H.G.3
Gerland, U.4
Hwa, T.5
Kondev, J.6
Phillips, R.7
-
4
-
-
0347987855
-
A self-organizing system of repressor gradients establishes segmental complexity in Drosophila
-
Clyde D.E., Corado M.S., Wu X., Pare A., Papatsenko D., and Small S. A self-organizing system of repressor gradients establishes segmental complexity in Drosophila. Nature 426 (2003) 849-853
-
(2003)
Nature
, vol.426
, pp. 849-853
-
-
Clyde, D.E.1
Corado, M.S.2
Wu, X.3
Pare, A.4
Papatsenko, D.5
Small, S.6
-
5
-
-
0001935440
-
Splines Minimizing Rotation-Invariant Semi-Norms in Sobolev Spaces
-
Schempp W., and Zeller K. (Eds), Springer-Verlag, Berlin
-
Duchon J. Splines Minimizing Rotation-Invariant Semi-Norms in Sobolev Spaces. In: Schempp W., and Zeller K. (Eds). Constructive Theory of Functions of Several Variables (1977), Springer-Verlag, Berlin 85-100
-
(1977)
Constructive Theory of Functions of Several Variables
, pp. 85-100
-
-
Duchon, J.1
-
6
-
-
0022551541
-
Cell cycle control by the nucleo-cytoplasmic ratio in early Drosophila development
-
Edgar B.A., Kiehle C.P., and Schubiger G. Cell cycle control by the nucleo-cytoplasmic ratio in early Drosophila development. Cell 44 (1986) 365-372
-
(1986)
Cell
, vol.44
, pp. 365-372
-
-
Edgar, B.A.1
Kiehle, C.P.2
Schubiger, G.3
-
7
-
-
0026062340
-
Interaction of the Drosophila gap gene giant with maternal and zygotic pattern-forming genes
-
Eldon E.D., and Pirrotta V. Interaction of the Drosophila gap gene giant with maternal and zygotic pattern-forming genes. Development 111 (1991) 367-378
-
(1991)
Development
, vol.111
, pp. 367-378
-
-
Eldon, E.D.1
Pirrotta, V.2
-
8
-
-
41949110823
-
-
Fowlkes, C.C., and Malik, J. (2006). Inferring nuclear movements from fixed material. Report no. UCB/EECS-2006-142. http://www.eecs.berkeley.edu/Pubs/TechRpts/2006/EECS-2006-142.pdf.
-
Fowlkes, C.C., and Malik, J. (2006). Inferring nuclear movements from fixed material. Report no. UCB/EECS-2006-142. http://www.eecs.berkeley.edu/Pubs/TechRpts/2006/EECS-2006-142.pdf.
-
-
-
-
9
-
-
34447099234
-
Probing the limits to positional information
-
Gregor T., Tank D.W., Wieschaus E.F., and Bialek W. Probing the limits to positional information. Cell 130 (2007) 153-164
-
(2007)
Cell
, vol.130
, pp. 153-164
-
-
Gregor, T.1
Tank, D.W.2
Wieschaus, E.F.3
Bialek, W.4
-
10
-
-
33749137281
-
Quantitative and predictive modeling of transcriptional control of the Drosophila melanogaster even skipped gene
-
Janssens H., Hou S., Jaeger J., Kim A., Myasnikova E., Sharp D., and Reinitz J. Quantitative and predictive modeling of transcriptional control of the Drosophila melanogaster even skipped gene. Nat. Genet. 38 (2006) 1159-1165
-
(2006)
Nat. Genet.
, vol.38
, pp. 1159-1165
-
-
Janssens, H.1
Hou, S.2
Jaeger, J.3
Kim, A.4
Myasnikova, E.5
Sharp, D.6
Reinitz, J.7
-
11
-
-
3142734333
-
Dynamic control of positional information in the early Drosophila embryo
-
Jaeger J., Surkova S., Blagov M., Janssens H., Kosman D., Kozlov K.N., Manu, Myasnikova E, Vanario-Alonso C.E., Samsonova M., Sharp D.H., et al. Dynamic control of positional information in the early Drosophila embryo. Nature 430 (2004) 368-371
-
(2004)
Nature
, vol.430
, pp. 368-371
-
-
Jaeger, J.1
Surkova, S.2
Blagov, M.3
Janssens, H.4
Kosman, D.5
Kozlov, K.N.6
Manu7
Myasnikova E8
Vanario-Alonso, C.E.9
Samsonova, M.10
Sharp, D.H.11
-
12
-
-
34247208442
-
3D morphology and gene expression in the Drosophila blastoderm at cellular resolution II: dynamics
-
Keränen S.V.E., Fowlkes C.C., Luengo Hendriks C.L., Sudar D., Knowles D.W., Malik J., and Biggin M.D. 3D morphology and gene expression in the Drosophila blastoderm at cellular resolution II: dynamics. Genome Biol. 7 (2006) R124
-
(2006)
Genome Biol.
, vol.7
-
-
Keränen, S.V.E.1
Fowlkes, C.C.2
Luengo Hendriks, C.L.3
Sudar, D.4
Knowles, D.W.5
Malik, J.6
Biggin, M.D.7
-
13
-
-
0035214296
-
A gene expression screen in zebrafish embryogenesis
-
Kudoh T., Tsang M., Hukriede N.A., Chen X., Dedekian M., Clarke C.J., Kiang A., Schultz S., Epstein J., Toyama R., and Dawid I. A gene expression screen in zebrafish embryogenesis. Genome Res. 11 (2001) 1979-1987
-
(2001)
Genome Res.
, vol.11
, pp. 1979-1987
-
-
Kudoh, T.1
Tsang, M.2
Hukriede, N.A.3
Chen, X.4
Dedekian, M.5
Clarke, C.J.6
Kiang, A.7
Schultz, S.8
Epstein, J.9
Toyama, R.10
Dawid, I.11
-
14
-
-
3843139305
-
Multiplex detection of RNA expression in Drosophila embryos
-
Kosman D., Mizutani C.M., Lemons D., Cox W.G., McGinnis W., and Bier E. Multiplex detection of RNA expression in Drosophila embryos. Science 305 (2004) 846
-
(2004)
Science
, vol.305
, pp. 846
-
-
Kosman, D.1
Mizutani, C.M.2
Lemons, D.3
Cox, W.G.4
McGinnis, W.5
Bier, E.6
-
15
-
-
0030057803
-
Redundant control of Ultrabithorax by zeste involves functional levels of zeste binding at the Ultrabithorax promoter
-
Laney J.D., and Biggin M.D. Redundant control of Ultrabithorax by zeste involves functional levels of zeste binding at the Ultrabithorax promoter. Development 122 (1996) 2303-2311
-
(1996)
Development
, vol.122
, pp. 2303-2311
-
-
Laney, J.D.1
Biggin, M.D.2
-
16
-
-
33846252240
-
Genome-wide atlas of gene expression in the adult mouse brain
-
Lein E.S., Hawrylycz M.J., Ao N., Ayres M., Bensigner A., Bernard A., Boe A.F., Boguski M.S., Brockway K.S., Byrnes E.J., et al. Genome-wide atlas of gene expression in the adult mouse brain. Nature 445 (2007) 168-176
-
(2007)
Nature
, vol.445
, pp. 168-176
-
-
Lein, E.S.1
Hawrylycz, M.J.2
Ao, N.3
Ayres, M.4
Bensigner, A.5
Bernard, A.6
Boe, A.F.7
Boguski, M.S.8
Brockway, K.S.9
Byrnes, E.J.10
-
17
-
-
19344368645
-
Functional evolution of a cis-regulatory module
-
Ludwig M., Palsson A., Alekseeva E., Bergman C., Nathan J., and Kreitman M. Functional evolution of a cis-regulatory module. PLoS Biol. 3 (2005) 588-598
-
(2005)
PLoS Biol.
, vol.3
, pp. 588-598
-
-
Ludwig, M.1
Palsson, A.2
Alekseeva, E.3
Bergman, C.4
Nathan, J.5
Kreitman, M.6
-
18
-
-
34247392710
-
3D morphology and gene expression in the Drosophila blastoderm at cellular resolution I: data acquisition pipeline
-
Luengo Hendriks C.L., Keränen S.V.E., Fowlkes C.C., Simirenko L., Weber G.H., Henriquez C., Kaszuba D.W., Hamann B., Eisen M.B., Malik J., et al. 3D morphology and gene expression in the Drosophila blastoderm at cellular resolution I: data acquisition pipeline. Genome Biol. 7 (2006) R123
-
(2006)
Genome Biol.
, vol.7
-
-
Luengo Hendriks, C.L.1
Keränen, S.V.E.2
Fowlkes, C.C.3
Simirenko, L.4
Weber, G.H.5
Henriquez, C.6
Kaszuba, D.W.7
Hamann, B.8
Eisen, M.B.9
Malik, J.10
-
19
-
-
34548307657
-
On cooperative quasi-equilibrium models of transcriptional regulation
-
Mjolsness E. On cooperative quasi-equilibrium models of transcriptional regulation. J. Bioinform. Comput. Biol. 5 2B (2007) 467-490
-
(2007)
J. Bioinform. Comput. Biol.
, vol.5
, Issue.2 B
, pp. 467-490
-
-
Mjolsness, E.1
-
20
-
-
0035115973
-
Registration of the expression patterns of Drosophila segmentation genes by two independent methods
-
Myasnikova E., Samsanova A., Kozlov K., Samsonova M., and Reinitz J. Registration of the expression patterns of Drosophila segmentation genes by two independent methods. Bioinformatics 17 (2001) 3-12
-
(2001)
Bioinformatics
, vol.17
, pp. 3-12
-
-
Myasnikova, E.1
Samsanova, A.2
Kozlov, K.3
Samsonova, M.4
Reinitz, J.5
-
21
-
-
3142630279
-
Gene regulatory network controlling embryonic specification in the sea urchin
-
Oliveri P., and Davidson E.H. Gene regulatory network controlling embryonic specification in the sea urchin. Curr. Opin. Genet. Dev. 14 (2004) 351-360
-
(2004)
Curr. Opin. Genet. Dev.
, vol.14
, pp. 351-360
-
-
Oliveri, P.1
Davidson, E.H.2
-
23
-
-
34347232160
-
PointCloudXplore: Visual analysis of 3D gene expression data using physical views and parallel coordinates
-
Santos B.C., Ertl T., and Joy K. (Eds), EuroVis 2006, Lisbon, Portugal
-
Rübel O., Weber G.H., Keränen S.V.E., Fowlkes C.C., Luengo Hendriks C.L., Shah N.Y., Biggin M.D., Hagen H., Knowles D.W., Malik J., et al. PointCloudXplore: Visual analysis of 3D gene expression data using physical views and parallel coordinates. In: Santos B.C., Ertl T., and Joy K. (Eds). Data Visualization 2006: Proceedings of the Eurographics/IEEE-VGTC Symposium on Visualization (2006), EuroVis 2006, Lisbon, Portugal
-
(2006)
Data Visualization 2006: Proceedings of the Eurographics/IEEE-VGTC Symposium on Visualization
-
-
Rübel, O.1
Weber, G.H.2
Keränen, S.V.E.3
Fowlkes, C.C.4
Luengo Hendriks, C.L.5
Shah, N.Y.6
Biggin, M.D.7
Hagen, H.8
Knowles, D.W.9
Malik, J.10
-
24
-
-
0026744792
-
Regulation of even-skipped stripe 2 in the Drosophila embryo
-
Small S., Blair A., and Levine M. Regulation of even-skipped stripe 2 in the Drosophila embryo. EMBO J. 11 (1992) 4047-4057
-
(1992)
EMBO J.
, vol.11
, pp. 4047-4057
-
-
Small, S.1
Blair, A.2
Levine, M.3
-
25
-
-
0036905707
-
Reconstruction of the dynamics of Drosophila genes expression from sets of images sharing a common pattern
-
Spirov A., Kazansky A., Timakin D., and Reinitz J. Reconstruction of the dynamics of Drosophila genes expression from sets of images sharing a common pattern. Real-Time Imaging 8 (2002) 507-518
-
(2002)
Real-Time Imaging
, vol.8
, pp. 507-518
-
-
Spirov, A.1
Kazansky, A.2
Timakin, D.3
Reinitz, J.4
-
26
-
-
2942706824
-
Quantitative contributions of CtBP-dependent and -independent repression activities of Knirps
-
Struffi P., Corado M., Kulkarni M., and Arnosti D.N. Quantitative contributions of CtBP-dependent and -independent repression activities of Knirps. Development 131 (2004) 2419-2429
-
(2004)
Development
, vol.131
, pp. 2419-2429
-
-
Struffi, P.1
Corado, M.2
Kulkarni, M.3
Arnosti, D.N.4
-
27
-
-
32944478048
-
A quantitative approach to the study of cell shapes and interactions during early chordate embryogenesis
-
Tassy O., Daian F., Hudson C., Bertrand V., and Lemaire P. A quantitative approach to the study of cell shapes and interactions during early chordate embryogenesis. Curr. Biol. 16 (2006) 345-358
-
(2006)
Curr. Biol.
, vol.16
, pp. 345-358
-
-
Tassy, O.1
Daian, F.2
Hudson, C.3
Bertrand, V.4
Lemaire, P.5
-
28
-
-
38349127974
-
Global analysis of patterns of gene expression during Drosophila embryogenesis
-
Tomancak P., Berman B.P., Beaton A., Weiszmann R., Kwan E., Hartenstein V., Celniker S.E., and Rubin G.M. Global analysis of patterns of gene expression during Drosophila embryogenesis. Genome Biol. 8 (2007) R145
-
(2007)
Genome Biol.
, vol.8
-
-
Tomancak, P.1
Berman, B.P.2
Beaton, A.3
Weiszmann, R.4
Kwan, E.5
Hartenstein, V.6
Celniker, S.E.7
Rubin, G.M.8
-
29
-
-
0017273327
-
Scanning electron microscopy of Drosophila embryogenesis
-
Turner F.R., and Mahowald A.P. Scanning electron microscopy of Drosophila embryogenesis. Dev. Biol. 50 (1976) 95-108
-
(1976)
Dev. Biol.
, vol.50
, pp. 95-108
-
-
Turner, F.R.1
Mahowald, A.P.2
-
30
-
-
0346494761
-
GenePaint.org: An atlas of gene expression patterns in the mouse embryo
-
Visel A., Thaller C., and Eichele G. GenePaint.org: An atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 32 (2004) D552-D556
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Visel, A.1
Thaller, C.2
Eichele, G.3
-
32
-
-
0013360501
-
Inheritance of egg size in Drosophila melanogaster
-
Warren D.C. Inheritance of egg size in Drosophila melanogaster. Genetics 9 (1924) 41-69
-
(1924)
Genetics
, vol.9
, pp. 41-69
-
-
Warren, D.C.1
-
33
-
-
67549148344
-
Visual exploration of three-dimensional gene expression using physical views and linked abstract views
-
10.1109/TCBB.2007.70249 Published online March 31, 2008
-
Weber G.H., Rübel O., Huang M.-Y., DePace A.H., Fowlkes C.C., Keränen S.V.E., Luengo Hendriks C.L., Hagen H., Knowles D.W., Malik J., et al. Visual exploration of three-dimensional gene expression using physical views and linked abstract views. IEEE/ACM Trans. Comput. Biol. Bioinform (2008) 10.1109/TCBB.2007.70249 Published online March 31, 2008
-
(2008)
IEEE/ACM Trans. Comput. Biol. Bioinform
-
-
Weber, G.H.1
Rübel, O.2
Huang, M.-Y.3
DePace, A.H.4
Fowlkes, C.C.5
Keränen, S.V.E.6
Luengo Hendriks, C.L.7
Hagen, H.8
Knowles, D.W.9
Malik, J.10
-
34
-
-
0035094449
-
Cis-regulatory logic in the endo16 gene: switching from a specification to a differentiation mode of control
-
Yuh C.H., Bolouri H., and Davidson E.H. Cis-regulatory logic in the endo16 gene: switching from a specification to a differentiation mode of control. Development 128 (2001) 617-629
-
(2001)
Development
, vol.128
, pp. 617-629
-
-
Yuh, C.H.1
Bolouri, H.2
Davidson, E.H.3
-
35
-
-
0017126746
-
Division and migration of nuclei during early embryogenesis of Drosophila melanogaster
-
Zalokar M., and Erk I. Division and migration of nuclei during early embryogenesis of Drosophila melanogaster. J. Micro. Cell. 25 (1976) 97-106
-
(1976)
J. Micro. Cell.
, vol.25
, pp. 97-106
-
-
Zalokar, M.1
Erk, I.2
|