-
1
-
-
0024710643
-
Direct cell lineage analysis in Drosophila melanogaster by time-lapse, three-dimensional optical microscopy of living embryos
-
2503522
-
Minden JS Agard DA Sedat JW Alberts BM Direct cell lineage analysis in Drosophila melanogaster by time-lapse, three-dimensional optical microscopy of living embryos. J Cell Biol 1989 109 505-516 2503522
-
(1989)
J Cell Biol J Cell Biol
, vol.109
, pp. 505-516
-
-
Minden, J.S.1
Agard, D.A.2
Sedat, J.W.3
Alberts, B.M.4
-
2
-
-
0033572278
-
A three-dimensional model of the mouse at embryonic day 9
-
10642785
-
Burne RM Bard JB Dubreuil C Guest E Hill W Kaufman M Stark M Davidson D Baldock RA A three-dimensional model of the mouse at embryonic day 9. Dev Biol 1999 216 457-468 10642785
-
(1999)
Dev Biol
, vol.216
, pp. 457-468
-
-
Burne, R.M.1
Bard, J.B.2
Dubreuil, C.3
Guest, E.4
Hill, W.5
Kaufman, M.6
Stark, M.7
Davidson, D.8
Baldock, R.A.9
-
3
-
-
0034528870
-
The Caenorhabditis elegans dosage compensation machinery is recruited to X chromosome DNA attached to an autosome
-
1461385 11102361
-
Lieb JD de Solórzano CO Rodriguez EG Jones A Angelo M Lockett S Meyer BJ The Caenorhabditis elegans dosage compensation machinery is recruited to X chromosome DNA attached to an autosome. Genetics 2000 156 1603-1621 1461385 11102361
-
(2000)
Genetics
, vol.156
, pp. 1603-1621
-
-
Lieb, J.D.1
de Solórzano, C.O.2
Rodriguez, E.G.3
Jones, A.4
Angelo, M.5
Lockett, S.6
Meyer, B.J.7
-
4
-
-
12244265472
-
BEST: A novel computational approach for comparing gene expression patterns from early stages of Drosophila melanogaster development
-
1462359 12524369
-
Kumar S Jayaraman K Panchanathan S Gurunathan R Marti-Subirana A Newfield SJ BEST: A novel computational approach for comparing gene expression patterns from early stages of Drosophila melanogaster development. Genetics 2002 162 2037-2047 1462359 12524369
-
(2002)
Genetics
, vol.162
, pp. 2037-2047
-
-
Kumar, S.1
Jayaraman, K.2
Panchanathan, S.3
Gurunathan, R.4
Marti-Subirana, A.5
Newfield, S.J.6
-
5
-
-
0242580739
-
Digitizing life at the level of the cell: High-performance laser-scanning microscopy and image analysis for in toto imaging of development
-
14623446
-
Megason SG Fraser SE Digitizing life at the level of the cell: high-performance laser-scanning microscopy and image analysis for in toto imaging of development. Mechanisms Dev 2003 120 1407-1420 14623446
-
(2003)
Mechanisms Dev
, vol.120
, pp. 1407-1420
-
-
Megason, S.G.1
Fraser, S.E.2
-
6
-
-
3142734333
-
Dynamic control of positional information in the early Drosophila embryo
-
15254541
-
Jaeger J Surkova S Blagov M Janssens H Kosman D Kozlov KN Manu Myasnikova E Vanario-Alonso CE Samsonova M Dynamic control of positional information in the early Drosophila embryo. Nature 2004 430 368-371 15254541
-
(2004)
Nature
, vol.430
, pp. 368-371
-
-
Jaeger, J.1
Surkova, S.2
Blagov, M.3
Janssens, H.4
Kosman, D.5
Kozlov, K.N.6
Manu7
Myasnikova, E.8
Vanario-Alonso, C.E.9
Samsonova, M.10
-
7
-
-
4043090758
-
Optical sectioning deep inside live embryos by selective plane illumination microscopy
-
15310904
-
Huisken J Swoger J Del Bene F Wittbrodt J Stelzer EH Optical sectioning deep inside live embryos by selective plane illumination microscopy. Science 2004 305 1007-1009 15310904
-
(2004)
Science
, vol.305
, pp. 1007-1009
-
-
Huisken, J.1
Swoger, J.2
Del Bene, F.3
Wittbrodt, J.4
Stelzer, E.H.5
-
8
-
-
55449133888
-
A digital atlas to characterize the mouse brain transcriptome
-
Carson JP Ju T Lu HC Thaller C Xu M Pallas SL Crair MC Warren J Chiu W Eichele G A digital atlas to characterize the mouse brain transcriptome. PLoS Computat Biol 2005 1 e41
-
(2005)
PLoS Computat Biol
, vol.1
-
-
Carson, J.P.1
Ju, T.2
Lu, H.C.3
Thaller, C.4
Xu, M.5
Pallas, S.L.6
Crair, M.C.7
Warren, J.8
Chiu, W.9
Eichele, G.10
-
10
-
-
34347212381
-
Berkeley Drosophila Transcription NetworkProject
-
Berkeley Drosophila Transcription NetworkProject http://bdtnp.lbl.gov/
-
-
-
-
11
-
-
0036045767
-
Mapping organism expression levels at cellular resolution in developing Drosophila
-
Bellingham: Society of Photo-Optical Instrumentation Engineers Conchello JA, Cogswell CJ, Wilson T
-
Knowles DW Keränen SVE Biggin M Sudar S Mapping organism expression levels at cellular resolution in developing Drosophila. Three-dimensional and Multidimensional Microscopy: Image Acquisition and Processing IX Bellingham: Society of Photo-Optical Instrumentation Engineers Conchello JA, Cogswell CJ, Wilson T 2002 4621 57-64
-
(2002)
Three-dimensional and Multidimensional Microscopy: Image Acquisition and Processing IX
, vol.4621
, pp. 57-64
-
-
Knowles, D.W.1
Keränen, S.V.E.2
Biggin, M.3
Sudar, S.4
-
12
-
-
12744263842
-
Computational identification of developmental enhancers: Conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseodoobscura
-
522868 15345045
-
Berman BP Pfeiffer BD Laverty TR Salzberg SL Rubin GM Eisen MB Celniker SE Computational identification of developmental enhancers: Conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseodoobscura Genome Biol 2004 5 R61 522868 15345045
-
(2004)
Genome Biol
, vol.5
-
-
Berman, B.P.1
Pfeiffer, B.D.2
Laverty, T.R.3
Salzberg, S.L.4
Rubin, G.M.5
Eisen, M.B.6
Celniker, S.E.7
-
14
-
-
0004105225
-
-
Oxford: Blackwell Scientific Publications
-
Lawrence P The Making of a Fly Oxford: Blackwell Scientific Publications 1992
-
(1992)
The Making of a Fly
-
-
Lawrence, P.1
-
16
-
-
26444591973
-
Genomic regulatory networks and animal development
-
16198288
-
Stathopoulos A Levine M Genomic regulatory networks and animal development. Dev Cell 2005 9 449-462 16198288
-
(2005)
Dev Cell
, vol.9
, pp. 449-462
-
-
Stathopoulos, A.1
Levine, M.2
-
18
-
-
34347246535
-
Visualization for validation and improvement of three-dimensional segmentation algorithms
-
Aire-la-Ville: Eurographics Association Brodlie K, Duke D, Joy KI
-
Weber GH Luengo Hendriks CL Keränen SVE Dillard SE Ju DY Sudar D Hamann B Visualization for validation and improvement of three-dimensional segmentation algorithms. Data Visualization 2005: Proceedings of the Eurographics/IEEE-VGTC Symposium on Visualization (August 29-September 2, Dublin, Ireland) Aire-la-Ville: Eurographics Association Brodlie K, Duke D, Joy KI 2005 93 100
-
(2005)
Data Visualization 2005: Proceedings of the Eurographics/IEEE-VGTC Symposium on Visualization (August 29-September 2, Dublin, Ireland)
, pp. 93-100
-
-
Weber, G.H.1
Luengo Hendriks, C.L.2
Keränen, S.V.E.3
Dillard, S.E.4
Ju, D.Y.5
Sudar, D.6
Hamann, B.7
-
19
-
-
34347232160
-
PointCloudXplore: Visual analysis of 3D gene expression data using physical views and parallel coordinates
-
Aire-la-Ville: Eurographics Association Santos BC, Ertl T, Joy KI
-
Rübel O Weber GH Keränen SVE Fowlkes CC Luengo Hendriks CL Simirenko L Shah NY Eisen MB Biggin MD Hagen H PointCloudXplore: Visual analysis of 3D gene expression data using physical views and parallel coordinates. Data Visualization 2006: Proceedings of the Eurographics/ IEEE-VGTC Symposium on Visualization. (4-8 September, Vienna, Austria) Aire-la-Ville: Eurographics Association Santos BC, Ertl T, Joy KI 2006 203-210
-
(2006)
Data Visualization 2006: Proceedings of the Eurographics/IEEE-VGTC Symposium on Visualization. (4-8 September, Vienna, Austria)
, pp. 203-210
-
-
Rübel, O.1
Weber, G.H.2
Keränen, S.V.E.3
Fowlkes, C.C.4
Luengo Hendriks, C.L.5
Simirenko, L.6
Shah, N.Y.7
Eisen, M.B.8
Biggin, M.D.9
Hagen, H.10
-
21
-
-
0025342635
-
Two-photon laser scanning fluorescence microscopy
-
2321027
-
Denk W Strickler JH Webb WW Two-photon laser scanning fluorescence microscopy. Science 1990 248 73-76 2321027
-
(1990)
Science
, vol.248
, pp. 73-76
-
-
Denk, W.1
Strickler, J.H.2
Webb, W.W.3
-
22
-
-
30944450665
-
Deep tissue two-photon microscopy
-
16299478
-
Helmchen F Denk W Deep tissue two-photon microscopy. Nat Methods 2005 2 932-940 16299478
-
(2005)
Nat Methods
, vol.2
, pp. 932-940
-
-
Helmchen, F.1
Denk, W.2
-
23
-
-
0024448849
-
Microtubule distribution reveals superficial metameric patterns in the early Drosophila embryo
-
2516799
-
Callaini G Microtubule distribution reveals superficial metameric patterns in the early Drosophila embryo. Development 1989 107 35-41 2516799
-
(1989)
Development
, vol.107
, pp. 35-41
-
-
Callaini, G.1
-
24
-
-
0035110623
-
Real-time imaging of cell-cell adherens junctions reveals that Drosophila mesoderm invagination begins with two phases of apical constriction of cells
-
11171319
-
Oda H Tsukita S Real-time imaging of cell-cell adherens junctions reveals that Drosophila mesoderm invagination begins with two phases of apical constriction of cells. J Cell Sci 2001 114 493-501 11171319
-
(2001)
J Cell Sci
, vol.114
, pp. 493-501
-
-
Oda, H.1
Tsukita, S.2
-
25
-
-
0035694783
-
Two new roles for the Drosophila AP patterning system in early morphogenesis
-
11748148
-
Blankenship JT Wieschaus E Two new roles for the Drosophila AP patterning system in early morphogenesis. Development 2001 128 5129-5138 11748148
-
(2001)
Development
, vol.128
, pp. 5129-5138
-
-
Blankenship, J.T.1
Wieschaus, E.2
-
26
-
-
0030780535
-
Integration of the head and trunk segmentation systems controls cephalic furrow formation in Drosophila
-
9367430
-
Vincent A Blankenship JT Wieschaus E Integration of the head and trunk segmentation systems controls cephalic furrow formation in Drosophila Development 1997 124 3747-3754 9367430
-
(1997)
Development
, vol.124
, pp. 3747-3754
-
-
Vincent, A.1
Blankenship, J.T.2
Wieschaus, E.3
-
27
-
-
0025812705
-
Gastrulation in Drosophila: The formation of the ventral furrow and posterior midgut invaginations
-
1935689
-
Sweeton D Parks S Costa M Wieschaus E Gastrulation in Drosophila: The formation of the ventral furrow and posterior midgut invaginations. Development 1991 112 775-789 1935689
-
(1991)
Development
, vol.112
, pp. 775-789
-
-
Sweeton, D.1
Parks, S.2
Costa, M.3
Wieschaus, E.4
-
28
-
-
0037075022
-
Establishment of developmental precision and proportions in the early Drosophila embryo
-
11845210
-
Houchmandzadeh B Wieschaus E Leibler S Establishment of developmental precision and proportions in the early Drosophila embryo. Nature 2002 415 798-802 11845210
-
(2002)
Nature
, vol.415
, pp. 798-802
-
-
Houchmandzadeh, B.1
Wieschaus, E.2
Leibler, S.3
-
29
-
-
0023103747
-
Genes that control dorsoventral polarity affect gene expression along the anteroposterior axis of the Drosophila embryo
-
3653004
-
Carroll SB Winslow GM Twombly VJ Scott MP Genes that control dorsoventral polarity affect gene expression along the anteroposterior axis of the Drosophila embryo. Development 1987 99 327-332 3653004
-
(1987)
Development
, vol.99
, pp. 327-332
-
-
Carroll, S.B.1
Winslow, G.M.2
Twombly, V.J.3
Scott, M.P.4
-
30
-
-
0023441546
-
Complementary patterns of even-skipped and fushi tarazu expression involve their differential regulation by a common set of segmentation genes in Drosophila
-
2892761
-
Frasch M Levine M Complementary patterns of even-skipped and fushi tarazu expression involve their differential regulation by a common set of segmentation genes in Drosophila Genes Dev 1987 1 981-995 2892761
-
(1987)
Genes Dev
, vol.1
, pp. 981-995
-
-
Frasch, M.1
Levine, M.2
-
31
-
-
0023635756
-
The molecular basis for metameric pattern in the Drosophila embryo
-
2896587
-
Akam M The molecular basis for metameric pattern in the Drosophila embryo. Development 1987 101 1-22 2896587
-
(1987)
Development
, vol.101
, pp. 1-22
-
-
Akam, M.1
-
32
-
-
0027451576
-
Regulation of runt transcription by Drosophila segmentation genes
-
8240970
-
Klingler M Gergen JP Regulation of runt transcription by Drosophila segmentation genes. Mechanisms Dev 1993 43 3-19 8240970
-
(1993)
Mechanisms Dev
, vol.43
, pp. 3-19
-
-
Klingler, M.1
Gergen, J.P.2
-
33
-
-
0027297243
-
Control of segmental asymmetry in Drosophila embryos
-
7915670
-
Manoukian AS Krause HM Control of segmental asymmetry in Drosophila embryos. Development 1993 118 785-796 7915670
-
(1993)
Development
, vol.118
, pp. 785-796
-
-
Manoukian, A.S.1
Krause, H.M.2
-
34
-
-
0034687172
-
Targeted localized degradation of Paired protein in Drosophila development
-
Raj L Vivekanand P Das TK Badam E Fernandes M Finley RL Jr Brent R Appel LF Hanes SD Weir M Targeted localized degradation of Paired protein in Drosophila development. Curr Biol 2000 10 1265 1272 11069107
-
(2000)
Curr Biol
, vol.10
, pp. 1265-1272
-
-
Raj, L.1
Vivekanand, P.2
Das, T.K.3
Badam, E.4
Fernandes, M.5
Finley Jr., R.L.6
Brent, R.7
Appel, L.F.8
Hanes, S.D.9
Weir, M.10
-
35
-
-
0041381349
-
Segmenting the fly embryo: A logical analysis of the pair-rule cross-regulatory module
-
12957124
-
Sánchez L Thieffry D Segmenting the fly embryo: A logical analysis of the pair-rule cross-regulatory module. J Theor Biol 2003 224 517-537 12957124
-
(2003)
J Theor Biol
, vol.224
, pp. 517-537
-
-
Sánchez, L.1
Thieffry, D.2
-
36
-
-
0023679744
-
The bicoid protein determines position in the Drosophila embryo in a concentration-dependent manner
-
3383245
-
Driever W Nüsslein-Volhard C The bicoid protein determines position in the Drosophila embryo in a concentration-dependent manner. Cell 1988 54 95-104 3383245
-
(1988)
Cell
, vol.54
, pp. 95-104
-
-
Driever, W.1
Nüsslein-Volhard, C.2
-
37
-
-
0026761537
-
Concentration-dependent activities of the Even-skipped protein in Drosophila embryos
-
1355458
-
Manoukian AS Krause HM Concentration-dependent activities of the Even-skipped protein in Drosophila embryos. Genes Dev 1992 6 1740-1751 1355458
-
(1992)
Genes Dev
, vol.6
, pp. 1740-1751
-
-
Manoukian, A.S.1
Krause, H.M.2
-
38
-
-
24944522339
-
Bicoid cooperative DNA binding is critical for embryonic patterning in Drosophila
-
1201621 16150708
-
Lebrecht D Foehr M Smith E Lopes FJ Vanario-Alonso CE Reinitz J Burz DS Hanes SD Bicoid cooperative DNA binding is critical for embryonic patterning in Drosophila Proc Natl Acad Sci USA 2005 102 13176-13181 1201621 16150708
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 13176-13181
-
-
Lebrecht, D.1
Foehr, M.2
Smith, E.3
Lopes, F.J.4
Vanario-Alonso, C.E.5
Reinitz, J.6
Burz, D.S.7
Hanes, S.D.8
-
39
-
-
0027480653
-
Complex regulation of early paired expression: Initial activation by gap genes and pattern modulation by pair-rule genes
-
8330531
-
Gutjahr T Frei E Noll M Complex regulation of early paired expression: initial activation by gap genes and pattern modulation by pair-rule genes. Development 1993 117 609-623 8330531
-
(1993)
Development
, vol.117
, pp. 609-623
-
-
Gutjahr, T.1
Frei, E.2
Noll, M.3
-
40
-
-
0028939021
-
Non-periodic cues generate seven ftz stripes in the Drosophila embryo
-
7619728
-
Yu Y Pick L Non-periodic cues generate seven ftz stripes in the Drosophila embryo. Mechanisms Dev 1995 50 163-175 7619728
-
(1995)
Mechanisms Dev
, vol.50
, pp. 163-175
-
-
Yu, Y.1
Pick, L.2
-
41
-
-
0035115973
-
Registration of the expression patterns of Drosophila segmentation genes by two independent methods
-
11222257
-
Myasnikova E Samsonova A Kozlov K Samsonova M Reinitz J Registration of the expression patterns of Drosophila segmentation genes by two independent methods. Bioinformatics 2001 17 3-12 11222257
-
(2001)
Bioinformatics
, vol.17
, pp. 3-12
-
-
Myasnikova, E.1
Samsonova, A.2
Kozlov, K.3
Samsonova, M.4
Reinitz, J.5
-
42
-
-
0036014564
-
A method for two-dimensional registration and construction of thetwo-dimensional atlas of gene expression patterns in situ
-
12066837
-
Kozlov K Myasnikova E Pisarev A Samsonova M Reinitz J A method for two-dimensional registration and construction of thetwo-dimensional atlas of gene expression patterns in situ In Silico Biol 2002 2 125-141 12066837
-
(2002)
In Silico Biol
, vol.2
, pp. 125-141
-
-
Kozlov, K.1
Myasnikova, E.2
Pisarev, A.3
Samsonova, M.4
Reinitz, J.5
-
43
-
-
0031980596
-
Double labeling with fluorescence in situ hybridization in Drosophila whole-mount embryos
-
9564514
-
Hughes SC Krause HM Double labeling with fluorescence in situ hybridization in Drosophila whole-mount embryos. Biotechniques 1998 24 530-532 9564514
-
(1998)
Biotechniques
, vol.24
, pp. 530-532
-
-
Hughes, S.C.1
Krause, H.M.2
-
44
-
-
0036228689
-
Slam encodes adevelopmental regulator of polarized membrane growth during cleavage of the Drosophila embryo
-
11970893
-
Lecuit T Samanta R Wieschaus E slam encodes adevelopmental regulator of polarized membrane growth during cleavage of the Drosophila embryo. Dev Cell 2002 2 425-436 11970893
-
(2002)
Dev Cell
, vol.2
, pp. 425-436
-
-
Lecuit, T.1
Samanta, R.2
Wieschaus, E.3
-
46
-
-
85062140846
-
DIPimage
-
DIPimage 1999 http://www.qi.tnw.tudelft.nl/DIPlib
-
(1999)
-
-
-
50
-
-
0036533762
-
Skeletons in n dimensions using shape primitives
-
Jonker PP Skeletons in n dimensions using shape primitives. Pattern Recognition Lett 2002 23 677-686
-
(2002)
Pattern Recognition Lett
, vol.23
, pp. 677-686
-
-
Jonker, P.P.1
-
53
-
-
0023523523
-
Computing distance transformations in convex and non-convex domains
-
Piper J Granum E Computing distance transformations in convex and non-convex domains. Pattern Recognition 1987 20 599-615
-
(1987)
Pattern Recognition
, vol.20
, pp. 599-615
-
-
Piper, J.1
Granum, E.2
-
54
-
-
0001528082
-
Shading from shape, the eikonal equation solved by grey-weighted distance transform
-
Verbeek PW Verwer BJH Shading from shape, the eikonal equation solved by grey-weighted distance transform. Pattern Recognition Lett 1990 11 681-690
-
(1990)
Pattern Recognition Lett
, vol.11
, pp. 681-690
-
-
Verbeek, P.W.1
Verwer, B.J.H.2
-
57
-
-
34147120474
-
A note on two problems in connexion with graphs
-
Dijkstra EW A note on two problems in connexion with graphs. Numerische Mathematik 1959 1 269-271
-
(1959)
Numerische Mathematik
, vol.1
, pp. 269-271
-
-
Dijkstra, E.W.1
-
58
-
-
10044232607
-
Normalized convolution - A technique for filtering incomplete and uncertain data
-
Oslo: Norwegian Society for Image Processing and Pattern Recognition Høgda KA, Braathen B, Heia K (May 25-28, Tromsø, Norway)
-
Knutsson H Westin CF Normalized convolution - a technique for filtering incomplete and uncertain data. SCIA '93: Proceedings of the 8th Scandinavian Conference on Image Analysis. (May 25-28, Tromsø, Norway) Oslo: Norwegian Society for Image Processing and Pattern Recognition Høgda KA, Braathen B, Heia K 1993 2 997-1006
-
(1993)
SCIA '93: Proceedings of the 8th Scandinavian Conference on Image Analysis
, vol.2
, pp. 997-1006
-
-
Knutsson, H.1
Westin, C.F.2
|