메뉴 건너뛰기




Volumn 21, Issue 9, 2004, Pages 1753-1759

Average allozyme heterozygosity in vertebrates correlates with Ka/Ks measured in the human-mouse lineage

Author keywords

Allozyme; Constraint; Heterozygosity; Ka; Ks; Substitution

Indexed keywords

ACID PHOSPHATASE; ADENOSINE DEAMINASE; ADENYLATE KINASE; ALANINE AMINOTRANSFERASE; ALCOHOL DEHYDROGENASE; ALKALINE PHOSPHATASE; ALLOENZYME; AMYLASE; ASPARTATE AMINOTRANSFERASE; CATALASE; CREATINE KINASE; CYTOSOL AMINOPEPTIDASE; DIHYDROLIPOAMIDE DEHYDROGENASE; DNA; FRUCTOSE BISPHOSPHATE ALDOLASE; GLUCOSE 6 PHOSPHATE DEHYDROGENASE; GLUCOSE DEHYDROGENASE; GLUTAMATE DEHYDROGENASE; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; GLYCEROL 3 PHOSPHATE DEHYDROGENASE; HEXOKINASE; IDITOL DEHYDROGENASE; ISOCITRATE DEHYDROGENASE; LACTATE DEHYDROGENASE; MALATE DEHYDROGENASE; MALATE DEHYDROGENASE (NADP); PHOSPHOGLUCONATE DEHYDROGENASE; PURINE NUCLEOSIDE PHOSPHORYLASE; SUPEROXIDE DISMUTASE; XANTHINE DEHYDROGENASE;

EID: 4143067905     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/molbev/msh193     Document Type: Article
Times cited : (14)

References (35)
  • 1
    • 0030076730 scopus 로고    scopus 로고
    • What does electrophoretic variation tell us about protein variation?
    • Barbadilla, A., L. M. King, and R. C. Lewontin. 1996. What does electrophoretic variation tell us about protein variation? Mol. Biol. Evol. 13:427-432.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 427-432
    • Barbadilla, A.1    King, L.M.2    Lewontin, R.C.3
  • 2
    • 0024477512 scopus 로고
    • Genic differentiation and origin of Robertsonian populations of the house mouse (Mus musculus domesticus Rutty)
    • Britton-Davidian, J., J. H. Nadeau, H. Croset, and L. Thaler. 1989. Genic differentiation and origin of Robertsonian populations of the house mouse (Mus musculus domesticus Rutty). Genet. Res. Camb. 53:29-44.
    • (1989) Genet. Res. Camb. , vol.53 , pp. 29-44
    • Britton-Davidian, J.1    Nadeau, J.H.2    Croset, H.3    Thaler, L.4
  • 3
    • 0017829075 scopus 로고
    • Evidence for the presence of two sympatric species of mice (Genus Mus L.) in southern France based on biochemical genetics
    • Britton-Davidian, J., and L. Thaler. 1978. Evidence for the presence of two sympatric species of mice (Genus Mus L.) in southern France based on biochemical genetics. Biochem. Genet. 16:213-225.
    • (1978) Biochem. Genet. , vol.16 , pp. 213-225
    • Britton-Davidian, J.1    Thaler, L.2
  • 4
    • 0346243805 scopus 로고    scopus 로고
    • Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios
    • Clark, A. G., S. Glanowski, R. Nielsen et al. (14 co-authors). 2003. Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios. Science 302:1960-1963.
    • (2003) Science , vol.302 , pp. 1960-1963
    • Clark, A.G.1    Glanowski, S.2    Nielsen, R.3
  • 5
    • 0029563023 scopus 로고
    • A method for estimating the numbers of synonymous and nonsynonymous substitutions per site
    • Comeron, J. M. 1995. A method for estimating the numbers of synonymous and nonsynonymous substitutions per site. J. Mol. Evol. 41:1152-1159.
    • (1995) J. Mol. Evol. , vol.41 , pp. 1152-1159
    • Comeron, J.M.1
  • 6
    • 0032825011 scopus 로고    scopus 로고
    • K-Estimator: Calculation of the number of nucleotide substitutions per site and the confidence intervals
    • Comeron, J. M. 1999. K-Estimator: calculation of the number of nucleotide substitutions per site and the confidence intervals. Bioinformatics 15:763-764.
    • (1999) Bioinformatics , vol.15 , pp. 763-764
    • Comeron, J.M.1
  • 7
    • 0030007094 scopus 로고    scopus 로고
    • Large-scale search for genes on which positive selection may operate
    • Endo, T., K. Ikeo, and T. Gojobori. 1996. Large-scale search for genes on which positive selection may operate. Mol. Biol. Evol. 13:685-690.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 685-690
    • Endo, T.1    Ikeo, K.2    Gojobori, T.3
  • 8
    • 0037186608 scopus 로고    scopus 로고
    • Testing the neutral theory of molecular evolution with genomic data from Drosophila
    • Fay, J. C., G. J. Wyckoff, and C.-I. Wu. 2004. Testing the neutral theory of molecular evolution with genomic data from Drosophila. Nature 415:1024-1026.
    • (2004) Nature , vol.415 , pp. 1024-1026
    • Fay, J.C.1    Wyckoff, G.J.2    Wu, C.-I.3
  • 9
    • 0042785584 scopus 로고    scopus 로고
    • Perspective: Detecting adaptive molecular polymorphisms: Lessons from the MHC
    • Garrigan, D., and P. W. Hedrick. 2003. Perspective: detecting adaptive molecular polymorphisms: lessons from the MHC. Evolution 57:1707-1722.
    • (2003) Evolution , vol.57 , pp. 1707-1722
    • Garrigan, D.1    Hedrick, P.W.2
  • 11
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • Goldman, N., and Z. Yang. 1994. A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol Biol. Evol. 11:725-736.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.2
  • 13
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 14
    • 0015953398 scopus 로고
    • The incidence of rare alleles determining electrophoretic variants: Data on 43 enzyme loci in man
    • Harris, H., D. A. Hopkinson, and E.B. Robson. 1974. The incidence of rare alleles determining electrophoretic variants: data on 43 enzyme loci in man. Ann. Hum. Genet. 27:237-253.
    • (1974) Ann. Hum. Genet. , vol.27 , pp. 237-253
    • Harris, H.1    Hopkinson, D.A.2    Robson, E.B.3
  • 16
    • 0032976592 scopus 로고    scopus 로고
    • The neutralist, the fly and the selectionist
    • Hey, J. 1999. The neutralist, the fly and the selectionist. Trends Ecol. Evol. 14:35-38.
    • (1999) Trends Ecol. Evol. , vol.14 , pp. 35-38
    • Hey, J.1
  • 17
    • 0040771786 scopus 로고
    • Nucleotide substitution at major histocompatibility complex class II loci: Evidence for overdominant selection
    • Hughes, A. L., and M. Nei. 1989. Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection. Proc. Natl. Acad. Sci. USA. 86:958-962.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 958-962
    • Hughes, A.L.1    Nei, M.2
  • 20
    • 0016669094 scopus 로고
    • Evolution at two levels in humans and chimpanzees
    • King, M.-C., and A. C. Wilson. 1975. Evolution at two levels in humans and chimpanzees. Science 188:107-116.
    • (1975) Science , vol.188 , pp. 107-116
    • King, M.-C.1    Wilson, A.C.2
  • 21
    • 0026040910 scopus 로고
    • Twenty-five years ago in genetics: Electrophoresis in the development of evolutionary genetics: Milestone or millstone?
    • Lewontin, R. C. 1991. Twenty-five years ago in genetics: electrophoresis in the development of evolutionary genetics: milestone or millstone? Genetics 128:657-662.
    • (1991) Genetics , vol.128 , pp. 657-662
    • Lewontin, R.C.1
  • 22
    • 0022005270 scopus 로고
    • A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes
    • Li, W.-H., C.-I. Wu, and C.-C. Luo. 1985. A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Mol. Biol. Evol. 2:150-174.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 150-174
    • Li, W.-H.1    Wu, C.-I.2    Luo, C.-C.3
  • 23
    • 0032483028 scopus 로고    scopus 로고
    • Evolutionary parameters of the transcribed mammalian genome: An analysis of 2,820 orthologous rodent and human sequences
    • Makalowski, W., and M.S. Boguski. 1998. Evolutionary parameters of the transcribed mammalian genome: an analysis of 2,820 orthologous rodent and human sequences. Proc. Natl. Acad. Sci. USA 95:9407-9412.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 9407-9412
    • Makalowski, W.1    Boguski, M.S.2
  • 24
    • 0007663470 scopus 로고
    • Nucleotide sequence divergence and functional constraint in mRNA evolution
    • Miyata, T., T. Yasunaga, and T. Nishida. 1980. Nucleotide sequence divergence and functional constraint in mRNA evolution. Proc. Natl. Acad. Sci. USA 77:7328-7332.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 7328-7332
    • Miyata, T.1    Yasunaga, T.2    Nishida, T.3
  • 25
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei, M., and T. Gojobori. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3:418-426.
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 26
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
    • Rozas, J., and R. Rozas. 1999. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175.
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 27
    • 0032427893 scopus 로고    scopus 로고
    • Are polymorphism and evolutionary rate of allozyme proteins limited by mutation or selection?
    • Skibinski, D. O. F., and R. D. Ward. 1998. Are polymorphism and evolutionary rate of allozyme proteins limited by mutation or selection? Heredity 81:692-702.
    • (1998) Heredity , vol.81 , pp. 692-702
    • Skibinski, D.O.F.1    Ward, R.D.2
  • 28
    • 0032849322 scopus 로고    scopus 로고
    • A method for detecting positive selection at single amino acid sites
    • Suzuki, Y., and T. Gojobori. 1999. A method for detecting positive selection at single amino acid sites. Mol. Biol. Evol. 16:1315-1328.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1315-1328
    • Suzuki, Y.1    Gojobori, T.2
  • 29
    • 0027968068 scopus 로고
    • ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 30
    • 0002363299 scopus 로고
    • Protein heterozygosity, protein structure, and taxonomic differentiation
    • Ward, R. D., D. O. F. Skibinski, and M. Woodwark. 1992. Protein heterozygosity, protein structure, and taxonomic differentiation. Evol. Biol. 26:73-157.
    • (1992) Evol. Biol. , vol.26 , pp. 73-157
    • Ward, R.D.1    Skibinski, D.O.F.2    Woodwark, M.3
  • 31
    • 0036667703 scopus 로고    scopus 로고
    • Is the synonymous substitution rate in mammals gene-specific?
    • Williams, E. J. D., and L. D. Hurst. 2002. Is the synonymous substitution rate in mammals gene-specific? Mol. Biol. Evol. 19:1395-1398.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1395-1398
    • Williams, E.J.D.1    Hurst, L.D.2
  • 32
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. CABIOS 13:555-556.
    • (1997) CABIOS , vol.13 , pp. 555-556
    • Yang, Z.1
  • 33
    • 0036270185 scopus 로고    scopus 로고
    • Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages
    • Yang, Z., and R. Nielsen. 2002. Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. Mol. Biol. Evol. 19:908-917.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 908-917
    • Yang, Z.1    Nielsen, R.2
  • 34
    • 0033921902 scopus 로고    scopus 로고
    • Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes
    • Zhang, J. 2000. Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes. J. Mol. Evol. 50:56-68.
    • (2000) J. Mol. Evol. , vol.50 , pp. 56-68
    • Zhang, J.1
  • 35
    • 1542286776 scopus 로고    scopus 로고
    • Mammalian housekeeping genes evolve more slowly than tissue-specific genes
    • Zhang, L., and W.-H. Li. 2004. Mammalian housekeeping genes evolve more slowly than tissue-specific genes. Mol. Biol. Evol. 21:236-239.
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 236-239
    • Zhang, L.1    Li, W.-H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.