K-Estimator: Calculation of the number of nucleotide substitutions per site and the confidence intervals

Bioinformatics

Volumn 15, Issue 9, 1999, Pages 763-764

  Comeron, Josep M ^a  

^a UNIVERSITY OF CHICAGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE;

CALCULATION; COMPUTER PROGRAM; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SHORT SURVEY; STATISTICS; SYSTEM ANALYSIS;

EID: 0032825011     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/15.9.763     Document Type: Short Survey

References (8)

1. Comeron, J.M. (1995) A method for estimating the numbers of synonymous and nonsynonymous substitutions per site. J. Mol. Evol., 41, 1152-1159.
2. Jukes, T.H. and Cantor, C.R. (1969) Evolution of protein molecules. In Munro, H.W. (ed.), Mammalian Protein Metabolism. Academic Press, New York, pp. 21-120.
3. Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol., 16, 111-120.
4. Kimura, M. and Ohta, T. (1972) On the stochastic model for estimation of mutational distance between homologous proteins. J. Mol. Evol., 2, 87-90.
5. Li, W.H. (1993) Unbiased estimation of the rates of synonymous and nonsynonymous substitution. J. Mol. Evol., 36, 96-99.
6. Pamilo, P. and Bianchi, N.O. (1993) Evolution of the Zfx and Zfy genes: rates and interdependence between the genes. Mol. Biol. Evol., 10, 271-281.
7. Tajima, F. (1993) Unbiased estimation of evolutionary distance between nucleotide sequences. Mol. Biol. Evol., 10, 677-688.
8. Tajima, F. and Nei, M. (1984) Estimation of evolutionary distance between nucleotide sequences. Mol. Biol. Evol., 1, 269-285.