Local regulation of mRNA translation: new insights from the bud

Trends in Cell Biology

Volumn 18, Issue 3, 2008, Pages 105-111

  Paquin, Nicolas ^a   Chartrand, Pascal ^a  

^a UNIVERSITÉ DE MONTRÉAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ASH1 PROTEIN; KHD1 PROTEIN; MESSENGER RNA; PROTEIN INHIBITOR; PROTEIN KINASE; PUF6 PROTEIN; RNA BINDING PROTEIN; UNCLASSIFIED DRUG; YCK1 PROTEIN;

BUD; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN EXPRESSION; PROTEIN LOCALIZATION; PROTEIN PHOSPHORYLATION; PROTEIN TRANSPORT; REVIEW; RNA STRUCTURE; RNA TRANSLATION; SACCHAROMYCES CEREVISIAE; TRANSLATION INITIATION; TRANSLATION REGULATION; YEAST CELL;

SACCHAROMYCES CEREVISIAE;

EID: 39949084297     PISSN: 09628924     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tcb.2007.12.004     Document Type: Review

References (56)

1. D. St Johnston Moving messages: the intracellular localization of mRNAs Nat. Rev. Mol. Cell Biol. 6 2005 363 375
2. U. Irion D. St Johnston bicoid RNA localization requires specific binding of an endosomal sorting complex Nature 445 2007 554 558
3. M. Schmid Coordination of endoplasmic reticulum and mRNA localization to the yeast bud Curr. Biol. 16 2006 1538 1543
4. S. Aronov mRNAs encoding polarity and exocytosis factors are cotransported with the cortical endoplasmic reticulum to the incipient bud in Saccharomyces cerevisiae Mol. Cell. Biol. 27 2007 3441 3455
5. S. Huttelmaier Spatial regulation of β-actin translation by Src-dependent phosphorylation of ZBP1 Nature 438 2005 512 515
6. N. Paquin Local activation of yeast ASH1 mRNA translation through phosphorylation of Khd1p by the casein kinase Yck1p Mol. Cell 26 2007 795 809
7. K.A. Shepard Widespread cytoplasmic mRNA transport in yeast: identification of 22 bud-localized transcripts using DNA microarray analysis Proc. Natl. Acad. Sci. U. S. A. 100 2003 11429 11434
8. M. Oeffinger Comprehensive analysis of diverse ribonucleoprotein complexes Nat. Methods 4 2007 951 956
9. P. Chartrand RNP localization and transport in yeast Annu. Rev. Cell Dev. Biol. 17 2001 297 310
10. R.M. Long Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA Science 277 1997 383 387
11. P.A. Takizawa Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast Nature 389 1997 90 93
12. P. Chartrand Structural elements required for the localization of ASH1 mRNA and of a green fluorescent protein reporter particle in vivo Curr. Biol. 9 1999 333 338
13. I. Gonzalez ASH1 mRNA localization in yeast involves multiple secondary structural elements and Ash1 protein translation Curr. Biol. 9 1999 337 340
14. P. Chartrand Asymmetric sorting of Ash1p in yeast results from inhibition of translation by localization elements in the mRNA Mol. Cell 10 2002 1319 1330
15. C. Olivier Identification of a conserved RNA motif essential for she2p recognition and mRNA localization to the yeast bud Mol. Cell. Biol. 25 2005 4752 4766
16. F. Bohl She2p, a novel RNA-binding protein tethers ASH1 mRNA to the Myo4p myosin motor via She3p EMBO J. 19 2000 5514 5524
17. R.M. Long She2p is a novel RNA-binding protein that recruits the Myo4p-She3p complex to ASH1 mRNA EMBO J. 19 2000 6592 6601
18. D. Niessing She2p Is a novel RNA binding protein with a basic helical hairpin motif Cell 119 2004 491 502
19. R.-P. Jansen Mother cell-specific HO expression in budding yeast depends on the unconventional myosin Myo4p and other cytoplasmic proteins Cell 84 1996 687 697
20. A. Jambhekar Unbiased selection of localization elements reveals cis -acting determinants of mRNA bud localization in Saccharomyces cerevisiae Proc. Natl. Acad. Sci. U. S. A. 102 2005 18005 18010
21. P.A. Takizawa R.D. Vale The myosin motor, Myo4p, binds ASH1 mRNA via the adapter protein She3p. Proc. Natl. Acad. Sci. U. S. A. 97 2000 5273 5278
22. P.A. Takizawa Plasma membrane compartmentalization in yeast by messenger RNA transport and a septin diffusion barrier Science 290 2000 341 344
23. K.D. Entian Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach Mol. Gen. Genet. 262 1999 683 702
24. C. Juschke A novel transport pathway for a yeast plasma membrane protein encoded by a localized mRNA Curr. Biol. 14 2004 406 411
25. C. van Vliet Intracellular sorting and transport of proteins Prog. Biophys. Mol. Biol. 83 2003 1 45
26. D. Preuss Structure of the yeast endoplasmic reticulum: localization of ER proteins using immunofluorescence and immunoelectron microscopy Yeast 7 1991 891 911
27. P. Estrada de Martin The organization, structure, and inheritance of the ER in higher and lower eukaryotes Biochem. Cell Biol. 83 2005 752 761
28. D. Pruyne Mechanisms of polarized growth and organelle segregation in yeast Annu. Rev. Cell Dev. Biol. 20 2004 559 591
29. P. Estrada Myo4p and She3p are required for cortical ER inheritance in Saccharomyces cerevisiae J. Cell Biol. 163 2003 1255 1266
30. M. Diehn Large-scale identification of secreted and membrane-associated gene products using DNA microarrays Nat. Genet. 25 2000 58 62
31. B. Misuzu O. Masako Transmission and scanning electron microscopic examination of intracellular organelles in freeze-substituted Kloeckera and Saccharomyces cerevisiae yeast cells J. Electron Microsc. Tech. 5 1987 249 261
32. S. Aronov J.E. Gerst Involvement of the late secretory pathway in actin regulation and mRNA transport in yeast J. Biol. Chem. 279 2004 36962 36971
33. L.A. Mingle Localization of all seven messenger RNAs for the actin-polymerization nucleator Arp2/3 complex in the protrusions of fibroblasts J. Cell Sci. 118 2005 2425 2433
34. A. Jambhekar J.L. DeRisi cis -acting determinants of asymmetric, cytoplasmic RNA transport RNA 13 2007 625 642
35. K. Irie The Khd1 protein, which has three KH RNA-binding motifs, is required for proper localization of ASH1 mRNA in yeast EMBO J. 21 2002 1158 1167
36. S. Komili Functional specificity among ribosomal proteins regulates gene expression Cell 131 2007 557 571
37. R.M. Long An exclusively nuclear RNA-binding protein affects asymmetric localization of ASH1 mRNA and Ash1p in yeast J. Cell Biol. 153 2001 307 318
38. C.R. Urbinati Loc1p is required for efficient assembly and nuclear export of the 60S ribosomal subunit Mol. Genet. Genomics 276 2006 369 377
39. G.B. Gonsalvez ASH1 mRNA anchoring requires reorganization of the Myo4p-She3p-She2p transport complex J. Biol. Chem. 279 2004 46286 46294
40. W. Gu A new yeast PUF family protein, Puf6p, represses ASH1 mRNA translation and is required for its localization Genes Dev. 18 2004 1452 1465
41. I. Lee An improved, bias-reduced probabilistic functional gene network of baker's yeast, Saccharomyces cerevisiae PLoS ONE 2 2007 e988
42. O. Denisenko K. Bomsztyk Yeast hnRNP K-like genes are involved in regulation of the telomeric position effect and telomere length Mol. Cell. Biol. 22 2002 286 297
43. A.C. Gavin Proteome survey reveals modularity of the yeast cell machinery Nature 440 2006 631 636
44. A.C. Gavin Functional organization of the yeast proteome by systematic analysis of protein complexes Nature 415 2002 141 147
45. C. Berset RNA-binding activity of translation initiation factor eIF4G1 from Saccharomyces cerevisiae RNA 9 2003 871 880
46. L. Vardy T.L. Orr-Weaver Regulating translation of maternal messages: multiple repression mechanisms Trends Cell Biol. 17 2007 547 554
47. J. Ptacek Global analysis of protein phosphorylation in yeast Nature 438 2005 679 684
48. A.P. Gerber Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast PLoS Biol. 2 2004 E79
49. L.C. Robinson The Yck2 yeast casein kinase 1 isoform shows cell cycle-specific localization to sites of polarized growth and is required for proper septin organization Mol. Biol. Cell 10 1999 1077 1092
50. A. Decottignies Casein kinase I-dependent phosphorylation and stability of the yeast multidrug transporter Pdr5p J. Biol. Chem. 274 1999 37139 37146
51. C. Marchal Casein kinase I-dependent phosphorylation within a PEST sequence and ubiquitination at nearby lysines signal endocytosis of yeast uracil permease J. Biol. Chem. 275 2000 23608 23614
52. H. Moriya M. Johnston Glucose sensing and signaling in Saccharomyces cerevisiae through the Rgt2 glucose sensor and casein kinase I Proc. Natl. Acad. Sci. U. S. A. 101 2004 1572 1577
53. Y. Feng N.G. Davis Akr1p and the type I casein kinases act prior to the ubiquitination step of yeast endocytosis: Akr1p is required for kinase localization to the plasma membrane Mol. Cell. Biol. 20 2000 5350 5359
54. L. Hicke Cytoplasmic tail phosphorylation of the α-factor receptor is required for its ubiquitination and internalization J. Cell Biol. 141 1998 349 358
55. Y. Oleynikov R.H. Singer Real-time visualization of ZBP1 association with β-actin mRNA during transcription and localization Curr. Biol. 13 2003 199 207
56. N. Paquin P. Chartrand Knowing when to let go Nat. Struct. Mol. Biol. 12 2005 1026 1027