Comprehensive proteomic analysis of protein changes during platelet storage requires complementary proteomic approaches

Transfusion

Volumn 48, Issue 3, 2008, Pages 425-435

  Thon, Jonathan N ^b   Schubert, Peter ^b   Duguay, Marie ^b   Serrano, Katherine ^b   Lin, Shujun ^b   Kast, Juergen ^b   Devine, Dana V ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN; PROTEIN; PROTEOME;

ARTICLE; DIFFERENTIAL GEL ELECTROPHORESIS; HUMAN; IMMUNOBLOTTING; ISOTOPE CODED AFFINITY TAGGING; ISOTOPE LABELING; ISOTOPE TAGGING FOR RELATIVE AND ABSOLUTE QUANTIFICATION; MASS SPECTROMETRY; PLATELET STORAGE LESION; PROTEIN ANALYSIS; PROTEOMICS; QUALITY CONTROL; QUANTITATIVE ANALYSIS; THROMBOCYTE PRESERVATION; TWO DIMENSIONAL GEL ELECTROPHORESIS;

BLOOD PLATELETS; BLOOD PRESERVATION; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HUMANS; IMMUNOBLOTTING; PROTEINS; PROTEOMICS;

EID: 39749195587     PISSN: 00411132     EISSN: 15372995     Source Type: Journal    
DOI: 10.1111/j.1537-2995.2007.01546.x     Document Type: Article

References (61)

1. Cardigan R, Williamson LM. The quality of platelets after storage for 7 days. Transfus Med 2003 13 : 173 87.
2. Evaluation of stored platelets. Vox Sang 2004 86 : 203 23.
3. Fratantoni JC, Sturdivant B, Poindexter BJ. Aberrant morphology of platelets stored in five-day containers. Thromb Res 1984 33 : 607 15.
4. Holme S, Murphy S. Quantitative measurements of platelet shape by light transmission studies: application to storage of platelets for transfusion. J Lab Clin Med 1978 92 : 53 64.
5. Rebecchi MJ, Scarlata S. Pleckstrin homology domains: a common fold with diverse functions. Annu Rev Biophys Biomol Struct 1998 27 : 503 28.
6. Holme S, Murphy S. Coulter counter and light transmission studies of platelets exposed to ADP, EDTA, and storage at 22°C. J Lab Clin Med 1980 96 : 480 93.
7. Holme S, Murphy S. Platelet storage at 22°C for transfusion: interrelationship of platelet density and size, medium pH, and viability after in vivo infusion. J Lab Clin Med 1983 101 : 161 74.
8. Rao AK, Niewiarowski S, Murphy S. Acquired granular pool defect in stored platelets. Blood 1981 57 : 203 8.
9. Rinder HM, Synder EL, Bonan JL. Activation in stored platelet concentrates: correlation between membrane expression of P-selectin, glycoprotein IIb/IIIa, and β-thromboglobulin release. Transfusion 1993 33 : 25 9.
10. Bode AP, Orton SM, Frye MJ. Vesiculation of platelets during in vitro aging. Blood 1991 77 : 887 95.
11. George JN. Platelet membrane glycoproteins: alternations during storage of human platelet concentrates. Thromb Res 1976 8 : 719 24.
12. George JN, Pickett EB, Heinz R. Platelet membrane glycoprotein changes during the preparation and storage of platelet concentrates. Transfusion 1988 28 : 123 6.
13. George JN, Pickett EB, Saucerman S, McEver RP, Kunicki TJ, Kieffer N, Newman PJ. Platelet surface glycoproteins. J Clin Invest 1986 78 : 340 8.
14. Jennings LK, Ashmun RA, Wang WC, Dockter ME. Analysis of human platelet glycoproteins IIb-IIIa and Glanzmann's thrombasthenia in whole blood by flow cytometry. Blood 1986 68 : 173 9.
15. Peter-Salonen K, Bucher U, Nydegger UE. Comparison of post-transfusion recoveries achieved with either fresh or stored platelet concentrates. Blut 1987 54 : 207 12.
16. Murphy S, Kahn RA, Holme S. Improved storage of platelets for transfusion in a new container. Blood 1982 60 : 194 200.
17. Simon TL, Nelson EJ, Carmen R, Murphy S. Extension of platelet concentrate storage. Transfusion 1983 23 : 207 12.
18. Schiffer CA, Lee EJ, Ness PM, Reilly J. Clinical evaluation of platelet concentrates stored from one to five days. Blood 1986 67 : 1591 4.
19. Hogge DE, Thompson BW, Schiffer CA. Platelet storage for 7 days in second-generation blood bags. Transfusion 1986 26 : 131 5.
20. Page MJ, Griffiths TA, Bleackley MR, Macgillivray RT. Proteomics: applications relevant to transfusion medicine. Transfus Med Rev 2006 20 : 63 74.
21. Anderson NL, Anderson, NG. The human plasma proteome: history, character, and diagnostic prospects. Mol Cell Proteomics 2002 1 : 845 67.
22. Jacobs JM, Adkins JN, Qian WJ, Liu T, Shen Y, Camp DG 2nd, Smith RD. Utilizing human blood plasma for proteomic biomarker discovery. J Proteome Res 2005 4 : 1073 85.
23. Pasini EM, Kirkegaard M, Mortensen P, Lutz HU, Thomas AW, Mann M. In-depth analysis of the membrane and cytosolic proteome of red blood cells. Blood 2006 108 : 791 801.
24. O'Neill EE, Brock CJ, von Kriegsheim AF, Pearce AC, Dwek RA, Watson SP, Hebestreit HF. Towards complete analysis of the platelet proteome. Proteomics 2002 2 : 288 305.
25. Maguire PB, Fitzgerald DJ. Platelet proteomics. J Thromb Haemost 2003 1 : 1593 601.
26. Maguire BP. Platelet proteomics: identification of potential therapeutic targets. Pathophysiol Haemost Thromb 2003 33 : 481 6.
27. Garcia A, Zitzmann N, Watson SP. Analyzing the platelet proteome. Semin Thromb Hemost 2004 30 : 485 9.
28. Marcus K, Meyer EH. Two-dimensional polyacrylamide gel electrophoresis for platelet proteomics. Methods Mol Biol 2004 273 : 421 34.
29. McRedmond JP, Park SD, Reilly DF, Coppinger JA, Maguire PB, Shields DC, Fitzgerald DJ. Integration of proteomics and genomics in platelets. Mol Cell Proteomics 2004 3 : 133 44.
30. Coppinger JA, Cagney G, Toomey S, Kislinger T, Belton O, McRedmond JP, Cahill DJ, Emili A, Fitzgerald DJ, Maguire PG. Characterization of the proteins released from activated platelets leads to localization of novel platelet proteins in atherosclerotic lesions. Blood 2004 103 : 2096 104.
31. Gorg A, Weiss W, Dunn MJ. Current two-dimensional electrophoresis technology for proteomics. Proteomics 2004 4 : 3665 85.
32. Lilley KS, Friedman DB. All about DIGE: quantification technology for differential-display 2D-gel proteomics. Expert Rev Proteomics 2004 1 : 401 9.
33. Gygi SP, Rist B, Griffin TJ, Eng J, Aebersold R. Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags. J Proteome Res 2002 1 : 47 54.
34. Ross PL, Huang YL, Marchese JN, Williamson B, Parker K, Hattan S, Khainovski N, Pillai S, Dey S, Daniels S, Purkayastha S, Juhasz P, Martin S, Bartlet-Jones M, He F, Jacobson A, Pappin DJ. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 2004 3 : 1154 69.
35. Thiele T, Steil L, Gebhard S, Scharf CH, Hammer E, Brigulla M, Lubenow N, Clemetson K J, Völker U, Greinacher A. Profiling of alterations in platelet proteins during storage of platelet concentrates. Transfusion 2007 47 : 1221 33.
36. Shevchenko A, Wilm M, Vorm O, Mann M. Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. Anal Chem 1996 68 : 850 8.
37. Perkins DN, Pappin DJ, Creasy DM, Cottrell JS. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 1999 20 : 3551 67.
38. Gnatenko DV, Dunn JJ, McCorkle SR, Weissmann D, Perrotta PL, Bahou WF. Transcript profiling of human platelets using microarray and serial analysis of gene expression. Blood 2003 101 : 2285 93.
39. Schneider LV, Hall MP. Stable isotope methods for high-precision proteomics. Drug Discov Today 2005 10 : 353 63.
40. Wu LT. Two-dimensional difference gel electrophoresis. Methods Mol Biol 2006 328 : 71 95.
41. Gygi SP, Rist B, Gerber SA, Turecek F, Gelb MH, Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat Biotechnol 1999 17 : 994 9.
42. Aebersold R. A mass spectrometric journey into protein and proteome research. J Am Soc Mass Spectrom 2003 14 : 685 95.
43. Wu WW, Wang G, Baek SJ, Shen RF. Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF. J Proteome Res 2006 5 : 651 8.
44. Garcia A, Prabhakar S, Brock CJ, Pearce AC, Dwek RA, Watson SP, Hebestreit HF, Zitzmann N. Extensive analysis of the human platelet proteome by two-dimensional gel electrophoresis and mass spectrometry. Proteomics 2004 4 : 656 68.
45. Maguire PB, Fitzgerald DJ. Platelet proteomics. J Thromb Haemost 2003 1 : 1593 601.
46. O'Neill EE, Brock CJ, von Kriegsheim AF, Pearce AC, Dwek RA, Watson SP, Hebestreit HF. Towards the complete analysis of the platelet proteome. Proteomics 2002 2 : 288 305.
47. Murphy S. Metabolic patterns of platelets - impact on storage for transfusion. Vox Sang 1994 67 Suppl 3 : 271 3.
48. Gulliksson H. Defining the optimal storage conditions for the long-term storage of platelets. Transfus Med Rev 2003 17 : 209 15.
49. Flaumenhaft R, Dilks J, Rozenvayn N, Monahan-Earley RA, Feng D, Dvorak AM. The action cytoskeleton differentially regulates platelet alpha-granule and densegranule secretion. Blood 2005 105 : 3879 87.
50. Clezardin P, Malaval L, Morel MC, Guichard J, Lecompte T, Trzeciak MC, Dechavanne M, Breton-Gorius J, Delmas PD, Kaplan C. Osteonectin is an alphagranule component involved with thrombospondin in platelet aggregation. J Bone Miner Res 1991 6 : 1059 70.
51. Rinder H, Snyder E. Activation of platelet concentrate during preparation and storage. Blood Cells 1992 18 : 445 56 discussion 57 60.
52. Rao G. Influence of storage on signal transduction pathways and platelet function. Blood Cells 1992 18 : 383 96 discussion 97 401.
53. García A, Prabhakar S, Hughan S, Anderson TW, Brock CJ, Pearce AC, Dwek RA, Watson SP, Hebestreit HF, Zitzmann N. Differential proteome analysis of TRAP-activated platelets: involvement of DOK-2 and phosphorylation of RGS proteins. Blood 2004 103 : 2088 95.
54. Bode A. Platelet activation may explain the storage lesion in platelet concentrates. Blood Cells 1990 16 : 109 25 discussion 25 6.
55. Anniss AM, Glenister KM, Killian JJ, Sparrow RL. Proteomic analysis of supernatants of stored red blood cell products. Transfusion 2005 45 : 1426 33.
56. Reddy KS, Perrotta PL. Proteomics in transfusion medicine. Transfusion 2004 44 : 601 4.
57. Maguire PB, Wynne KJ, Harney DF, O'Donoghue NM, Stephens G, Fitzgerald DJ. Identification of the phosphotyrosine proteome from thrombin activated platelets. Proteomics 2002 2 : 642 8.
58. Marcus K, Immler D, Sternberger J, Meyer HE. Identification of platelet proteins separated by two-dimensional gel electrophoresis and analyzed by matrix assisted laser desorption/ionization-time of flight-mass spectrometry and detection of tyrosine-phosphorylated proteins. Electrophoresis 2000 21 : 2622 36.
59. Patton WF, Schulenberg B, Steinberg TH. Two-dimensional gel electrophoresis; better than a poke in the ICAT? Curr Opin Biotechnol 2002 13 : 321 8.
60. Griffin T, Goodlett T, Aebersold R. Advances in proteome analysis by mass spectrometry. Curr Opin Biotechnol 2001 12 : 607 12.
61. Aebersold R, Mann M. Mass spectrometry-based proteomics. Nature 2003 422 : 198 207.