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Volumn 8, Issue , 2007, Pages

Diversity in conserved genes in tomato

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARTICLE; EXPRESSED SEQUENCE TAG; GENE DELETION; GENE INSERTION; GENE MAPPING; GENETIC CONSERVATION; GENETIC VARIABILITY; GERMPLASM; INTRON; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT BREEDING; PLANT GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM; SOLANUM; SOLANUM LYCOPERSICUM; SOLANUM PIMPINELLIFOLIUM; TOMATO; UNINDEXED SEQUENCE; DNA SEQUENCE; GENE; GENETICS; NUCLEIC ACID DATABASE;

EID: 39749125665     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-8-465     Document Type: Article
Times cited : (69)

References (37)
  • 3
    • 1242299575 scopus 로고    scopus 로고
    • Improved tomato fruit color within an inbred backcross line derived from Lycopersicon esculentum and L-hirsutum involves the interaction of loci
    • Kabelka E Yang WC Francis DM Improved tomato fruit color within an inbred backcross line derived from Lycopersicon esculentum and L-hirsutum involves the interaction of loci J Am Soc Hortic Sci J Am Soc Hortic Sci 2004, 129(2):250-257
    • (2004) J Am Soc Hortic Sci J Am Soc Hortic Sci , vol.129 , Issue.2 , pp. 250-257
    • Kabelka, E.1    Yang, W.C.2    Francis, D.M.3
  • 5
    • 0034712852 scopus 로고    scopus 로고
    • A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene
    • 10.1073/pnas.97.9.4718
    • Fridman E Pleban T Zamir D A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene Proc Nat Acad Sci (USA) 2000, 97:4718-4723 10.1073/pnas.97.9.4718
    • (2000) Proc Nat Acad Sci (USA) , vol.97 , pp. 4718-4723
    • Fridman, E.1    Pleban, T.2    Zamir, D.3
  • 6
    • 0032748912 scopus 로고    scopus 로고
    • Genetic improvement of processing tomatoes: A 20 years perspective
    • 10.1023/A:1003760015485
    • Grandillo S Zamir D Tanksley S Genetic improvement of processing tomatoes: A 20 years perspective Euphytica 1999, 110(2):85-97 10.1023/ A:1003760015485
    • (1999) Euphytica , vol.110 , Issue.2 , pp. 85-97
    • Grandillo, S.1    Zamir, D.2    Tanksley, S.3
  • 7
    • 28444447445 scopus 로고    scopus 로고
    • Tomato SNP discovery by EST mining and resequencing
    • 10.1007/s11032-005-1911-5
    • Labate JA Baldo AM Tomato SNP discovery by EST mining and resequencing Molecular Breeding 2005, 16(4):343-349 10.1007/s11032-005-1911-5
    • (2005) Molecular Breeding , vol.16 , Issue.4 , pp. 343-349
    • Labate, J.A.1    Baldo, A.M.2
  • 8
    • 4444376339 scopus 로고    scopus 로고
    • Discovery of single nucleotide polymorphisms in Lycopersicon esculentum by computer aided analysis of expressed sequence tags
    • 10.1023/B:MOLB.0000037992.03731.a5
    • Yang W Bai X Kabelka E Eaton C Kamoun S van der Knaap E D. F Discovery of single nucleotide polymorphisms in Lycopersicon esculentum by computer aided analysis of expressed sequence tags. Molecular Breeding 2004, 14:21-24 10.1023/B:MOLB.0000037992.03731.a5
    • (2004) Molecular Breeding , vol.14 , pp. 21-24
    • Yang, W.1    Bai, X.2    Kabelka, E.3    Eaton, C.4    Kamoun, S.5    van der Knaap, E.D.F.6
  • 9
    • 0038744804 scopus 로고    scopus 로고
    • SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines
    • 130040 12366868 10.1186/1471-2156-3-19
    • Ching A Caldwell KS Jung M Dolan M Smith OS Tingey S Morgante M Rafalski AJ SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines BMC Genet 2002, 3(1):19 130040 12366868 10.1186/ 1471-2156-3-19
    • (2002) BMC Genet , vol.3 , Issue.1 , pp. 19
    • Ching, A.1    Caldwell, K.S.2    Jung, M.3    Dolan, M.4    Smith, O.S.5    Tingey, S.6    Morgante, M.7    Rafalski, A.J.8
  • 11
    • 0346667028 scopus 로고    scopus 로고
    • From Arabidopsis thaliana to Brassica napus: Development of amplified consensus genetic markers (ACGM) for construction of a gene map
    • 10.1007/s00122-002-1040-z 12582899
    • Fourmann M Barret P Froger N Baron C Charlot F Delourme R Brunel D From Arabidopsis thaliana to Brassica napus: Development of amplified consensus genetic markers (ACGM) for construction of a gene map Theor Appl Genet 2002, 105(8):1196-1206 10.1007/s00122-002-1040-z 12582899
    • (2002) Theor Appl Genet , vol.105 , Issue.8 , pp. 1196-1206
    • Fourmann, M.1    Barret, P.2    Froger, N.3    Baron, C.4    Charlot, F.5    Delourme, R.6    Brunel, D.7
  • 12
    • 0035984048 scopus 로고    scopus 로고
    • Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants
    • 150699 12119367 10.1105/tpc.010479
    • Fulton TM Van der Hoeven R Eannetta NT Tanksley SD Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants The Plant cell 2002, 14(7):1457-1467 150699 12119367 10.1105/tpc.010479
    • (2002) The Plant Cell , vol.14 , Issue.7 , pp. 1457-1467
    • Fulton, T.M.1    Van der Hoeven, R.2    Eannetta, N.T.3    Tanksley, S.D.4
  • 13
    • 0031012314 scopus 로고    scopus 로고
    • Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes
    • 10.1038/ng0197-47 8988168
    • Lyons LA Laughlin TF Copeland NG Jenkins NA Womack JE OBrien SJ Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes Nature Genetics 1997, 15(1):47-56 10.1038/ng0197-47 8988168
    • (1997) Nature Genetics , vol.15 , Issue.1 , pp. 47-56
    • Lyons, L.A.1    Laughlin, T.F.2    Copeland, N.G.3    Jenkins, N.A.4    Womack, J.E.5    OBrien, S.J.6
  • 14
    • 33751344142 scopus 로고    scopus 로고
    • Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: A test case in the euasterid plant clade
    • 1667096 16951058 10.1534/genetics.106.062455
    • Wu FN Mueller LA Crouzillat D Petiard V Tanksley SD Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: A test case in the euasterid plant clade Genetics 2006, 174(3):1407-1420 1667096 16951058 10.1534/genetics.106.062455
    • (2006) Genetics , vol.174 , Issue.3 , pp. 1407-1420
    • Wu, F.N.1    Mueller, L.A.2    Crouzillat, D.3    Petiard, V.4    Tanksley, S.D.5
  • 17
    • 33747865080 scopus 로고    scopus 로고
    • Analyses of synteny between Arabidopsis thaliana and species in the Asteraceae reveal a complex network of small syntenic segments and major chromosomal rearrangements
    • 1569713 16783026 10.1534/genetics.105.049205
    • Timms L Jimenez R Chase M Lavelle D McHale L Kozik A Lai Z Heesacker A Knapp S Rieseberg L Michelmore R Kesseli R Analyses of synteny between Arabidopsis thaliana and species in the Asteraceae reveal a complex network of small syntenic segments and major chromosomal rearrangements Genetics 2006, 173(4):2227-2235 1569713 16783026 10.1534/ genetics.105.049205
    • (2006) Genetics , vol.173 , Issue.4 , pp. 2227-2235
    • Timms, L.1    Jimenez, R.2    Chase, M.3    Lavelle, D.4    McHale, L.5    Kozik, A.6    Lai, Z.7    Heesacker, A.8    Knapp, S.9    Rieseberg, L.10    Michelmore, R.11    Kesseli, R.12
  • 18
    • 39749127183 scopus 로고    scopus 로고
    • National Center for Biological Information ftp://ftp.ncbi.nih.gov/ genomes/Arabidopsis_thaliana
    • National Center for Biological Information. Arabidopsis thaliana FTP ftp://ftp.ncbi.nih.gov/genomes/Arabidopsis_thaliana
    • Arabidopsis Thaliana FTP
  • 19
    • 33750962013 scopus 로고    scopus 로고
    • Intron Size, Abundance, and Distribution within Untranslated Regions of Genes
    • 10.1093/molbev/msl111 16980575
    • Hong X Scofield DG Lynch M Intron Size, Abundance, and Distribution within Untranslated Regions of Genes Mol Biol Evol 2006, 23(12):2392-2404 10.1093/molbev/msl111 16980575
    • (2006) Mol Biol Evol , vol.23 , Issue.12 , pp. 2392-2404
    • Hong, X.1    Scofield, D.G.2    Lynch, M.3
  • 20
    • 0024232413 scopus 로고
    • Chloroplast DNA-sequences integrated into an intron of a tomato nuclear gene
    • 10.1007/BF00331304
    • Pichersky E Tanksley S Chloroplast DNA-sequences integrated into an intron of a tomato nuclear gene. Molecular & General Genetics 1988, 215(1):65-68 10.1007/BF00331304
    • (1988) Molecular & General Genetics , vol.215 , Issue.1 , pp. 65-68
    • Pichersky, E.1    Tanksley, S.2
  • 21
    • 39749167014 scopus 로고    scopus 로고
    • unirepeats.30.20060602 ftp://ftp.sgn.cornell.edu/tomato_genome/repeats/
    • Mueller LA unirepeats.30.20060602 ftp://ftp.sgn.cornell.edu/ tomato_genome/repeats/
    • Mueller, L.A.1
  • 22
    • 22844437770 scopus 로고    scopus 로고
    • Temperature gradient capillary electrophoresis (TGCE) - A tool for the high-throughput discovery and mapping of SNPs and IDPs
    • 10.1007/s00122-005-1997-5 15912345
    • Hsia AP Wen TJ Chen HD Liu Z Yandeau-Nelson MD Wei Y Guo L Schnable PS Temperature gradient capillary electrophoresis (TGCE) - a tool for the high-throughput discovery and mapping of SNPs and IDPs Theor Appl Genet 2005, 111(2):218-225 10.1007/s00122-005-1997-5 15912345
    • (2005) Theor Appl Genet , vol.111 , Issue.2 , pp. 218-225
    • Hsia, A.P.1    Wen, T.J.2    Chen, H.D.3    Liu, Z.4    Yandeau-Nelson, M.D.5    Wei, Y.6    Guo, L.7    Schnable, P.S.8
  • 24
    • 0036743506 scopus 로고    scopus 로고
    • Comparative sequencing in the genus Lycopersicon: Implications for the evolution of fruit size in the domestication of cultivated tomatoes
    • 1 1462239 12242247
    • Nesbitt TC Tanksley SD Comparative sequencing in the genus Lycopersicon: Implications for the evolution of fruit size in the domestication of cultivated tomatoes Genetics 1 2002, 162:365-379 1462239 12242247
    • (2002) Genetics , vol.162 , pp. 365-379
    • Nesbitt, T.C.1    Tanksley, S.D.2
  • 26
  • 29
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • 9521922
    • Ewing B Green P Base-calling of automated sequencer traces using phred. II. Error probabilities Genome research 1998, 8(3):186-194 9521922
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 31
    • 0028846653 scopus 로고
    • An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL
    • 1206837 8582620
    • Eshed Y Zamir D An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL Genetics 1995, 141:1147-1162 1206837 8582620
    • (1995) Genetics , vol.141 , pp. 1147-1162
    • Eshed, Y.1    Zamir, D.2
  • 34
    • 0034892466 scopus 로고    scopus 로고
    • Identification and characterization of a novel locus controlling early fruit development in tomato
    • 10.1007/s001220100623
    • van der Knaap E Tanksley SD Identification and characterization of a novel locus controlling early fruit development in tomato Theoretical and Applied Genetics 2001, 103(2-3):353-358 10.1007/s001220100623
    • (2001) Theoretical and Applied Genetics , vol.103 , Issue.2-3 , pp. 353-358
    • van der Knaap, E.1    Tanksley, S.D.2
  • 37
    • 0000533526 scopus 로고
    • 'Mountain Spring' tomato; NC 8276 and NC 84173 tomato breeding lines
    • Gardner RG 'Mountain Spring' tomato; NC 8276 and NC 84173 tomato breeding lines. HortScience 1992, 27:1233-1234
    • (1992) HortScience , vol.27 , pp. 1233-1234
    • Gardner, R.G.1


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