Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants

Plant Cell

Volumn 14, Issue 7, 2002, Pages 1457-1467

  Fulton, Theresa M ^a   Van der Hoeven, Rutger ^a   Eannetta, Nancy T ^a   Tanksley, Steven D ^a  

^a Department of Population Medicine and Diagnostic Sciences   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOSYNTHESIS; DEGRADATION; DNA; GENES; MAPPING;

HYBRIDIZATION;

PLANTS (BOTANY);

ARABIDOPSIS; EMBRYOPHYTA; LYCOPERSICON ESCULENTUM; MEDICAGO; MEDICAGO TRUNCATULA;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CHROMOSOME MAP; COMPARATIVE STUDY; CONSENSUS SEQUENCE; EXPRESSED SEQUENCE TAG; GENE LIBRARY; GENETIC DATABASE; GENETIC MARKER; GENETICS; GENOME; MEDICAGO; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT; SEQUENCE ALIGNMENT; SYNTENY; TOMATO;

AMINO ACID SEQUENCE; ARABIDOPSIS; CHROMOSOME MAPPING; CONSENSUS SEQUENCE; CONSERVED SEQUENCE; DATABASES, GENETIC; EXPRESSED SEQUENCE TAGS; GENETIC MARKERS; GENOME, PLANT; GENOMIC LIBRARY; LYCOPERSICON ESCULENTUM; MEDICAGO; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANTS; SEQUENCE ALIGNMENT; SYNTENY;

EID: 0035984048     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.010479     Document Type: Article

References (21)

1. Now for the hard ones
2. Grass genomes
3. Genome conservation among three legume genera detected with DNA markers
4. Phylogenetics of seed plants: An analysis of nucleotide sequences from the plastid gene rbcL
5. A technique for radiolabelling DNA restriction fragments to a high specific activity
6. Comparative genetics in the grasses
7. A phylogenetic analysis of modern and cretaceous Triuridaceae (Monocotyledoneae)
8. Comparing sequenced segments of the tomato and Arabidopsis genomes: Large-scale duplication followed by selective gene loss creates a network of synteny
9. MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations
10. Genome mapping in Capsicum and the evolution of genome structure in the Solanaceae
11. Comparative genome analysis of mungbean (Vigna radiata [L.] Wilczek) and cowpea (V. unguiculata [L.] Walpers) using RFLP mapping data
12. Comparative genomics of plant chromosomes
13. A bonanza for plant genomics
14. High density molecular linkage maps of the tomato and potato genomes
15. The COG database: A tool for genome-scale analysis of protein functions and evolution
16. A genomic perspective on protein families
17. Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing
18. The origins of genome duplications in Arabidopsis
19. Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids
20. Rates of nucleotide substitution in angiosperm mitochondrial DNA sequences and dates of divergence between Brassica and other lineages