메뉴 건너뛰기




Volumn 8, Issue 11, 2007, Pages

Quantification of ortholog losses in insects and vertebrates

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; EVOLUTIONARY RATE; FLY; GENE LOSS; GENOMICS; HONEYBEE; INSECT; MOLECULAR EVOLUTION; MOLECULAR PHYLOGENY; NONHUMAN; ORTHOLOGY; QUANTITATIVE ANALYSIS; SPECIES DIFFERENCE; TRIBOLIUM; VERTEBRATE; ANIMAL; BIOLOGICAL MODEL; GENETIC VARIABILITY; GENETICS; HUMAN; PHYLOGENY; STATISTICAL MODEL;

EID: 38549103170     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2007-8-11-r242     Document Type: Article
Times cited : (55)

References (76)
  • 1
    • 0036245495 scopus 로고    scopus 로고
    • Segmental duplications and the evolution of the primate genome
    • 10.1038/nrg705 11823792
    • Samonte RV Eichler EE Segmental duplications and the evolution of the primate genome. Nat Rev Genet 2002 3 65-72 10.1038/nrg705 11823792
    • (2002) Nat Rev Genet , vol.3 , pp. 65-72
    • Samonte, R.V.1    Eichler, E.E.2
  • 2
    • 0037500141 scopus 로고    scopus 로고
    • Evolution by gene duplication: An update
    • 10.1016/S0169-5347(03)00033-8
    • Zhang J Evolution by gene duplication: An update. Trends Ecol Evol 2003 18 292-298 10.1016/S0169-5347(03)00033-8
    • (2003) Trends Ecol Evol , vol.18 , pp. 292-298
    • Zhang, J.1
  • 3
    • 0032865868 scopus 로고    scopus 로고
    • RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements
    • 10.1016/S0378-1119(99)00227-9 10570990
    • Brosius J RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements. Gene 1999 238 115-134 10.1016/S0378-1119(99)00227-9 10570990
    • (1999) Gene , vol.238 , pp. 115-134
    • Brosius, J.1
  • 4
    • 33745463000 scopus 로고    scopus 로고
    • Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates
    • 10.1007/s10038-006-0391-8
    • Niimura Y Nei M Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates. J Human Genet 2006 51 505-517 10.1007/s10038-006-0391-8
    • (2006) J Human Genet , vol.51 , pp. 505-517
    • Niimura, Y.1    Nei, M.2
  • 5
    • 19344370697 scopus 로고    scopus 로고
    • Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates
    • 314465 14737185 10.1371/journal.pbio.0020005
    • Gilad Y Wiebe V Przeworski M Lancet D Paabo S Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. PLoS Biol 2004 2 E5 314465 14737185 10.1371/ journal.pbio.0020005
    • (2004) PLoS Biol , vol.2
    • Gilad, Y.1    Wiebe, V.2    Przeworski, M.3    Lancet, D.4    Paabo, S.5
  • 6
    • 0033360995 scopus 로고    scopus 로고
    • When less is more: Gene loss as an engine of evolutionary change
    • 10.1086/302219
    • Olson MV When less is more: Gene loss as an engine of evolutionary change. Am Human Genet 1999 64 18-23 10.1086/302219
    • (1999) Am Human Genet , vol.64 , pp. 18-23
    • Olson, M.V.1
  • 7
    • 33644980516 scopus 로고    scopus 로고
    • Gene losses during human origins
    • 1361800 16464126 10.1371/journal.pbio.0040052
    • Wang X Grus WE Zhang J Gene losses during human origins. PLoS Biol 2006 4 e52 1361800 16464126 10.1371/journal.pbio.0040052
    • (2006) PLoS Biol , vol.4
    • Wang, X.1    Grus, W.E.2    Zhang, J.3
  • 8
    • 30744451158 scopus 로고    scopus 로고
    • Adaptive loss of an old duplicated gene during incipient speciation
    • 10.1093/molbev/msj045 16251509
    • Greenberg AJ Moran JR Fang S Wu CI Adaptive loss of an old duplicated gene during incipient speciation. Mol Biol Evol 2006 23 401-410 10.1093/ molbev/msj045 16251509
    • (2006) Mol Biol Evol , vol.23 , pp. 401-410
    • Greenberg, A.J.1    Moran, J.R.2    Fang, S.3    Wu, C.I.4
  • 10
    • 46349085319 scopus 로고    scopus 로고
    • The first genome sequence of a beetle, Tribolium castaneum, a model for insect development and pest biology
    • Consortium TGS The first genome sequence of a beetle, Tribolium castaneum, a model for insect development and pest biology. Nature
    • Nature
    • Consortium, T.G.S.1
  • 12
    • 41149121347 scopus 로고    scopus 로고
    • The evolution of Mammalian gene families
    • 1762380 17183716 10.1371/journal.pone.0000085
    • Demuth JP Bie TD Stajich JE Cristianini N Hahn MW The evolution of Mammalian gene families. PLoS ONE 2006 1 e85 1762380 17183716 10.1371/ journal.pone.0000085
    • (2006) PLoS ONE , vol.1
    • Demuth, J.P.1    Bie, T.D.2    Stajich, J.E.3    Cristianini, N.4    Hahn, M.W.5
  • 13
    • 33745067419 scopus 로고    scopus 로고
    • The gain and loss of genes during 600 million years of vertebrate evolution
    • 1779523 16723033 10.1186/gb-2006-7-5-r43
    • Blomme T Vandepoele K De Bodt S Simillion C Maere S Van de Peer Y The gain and loss of genes during 600 million years of vertebrate evolution. Genome Biol 2006 7 R43 1779523 16723033 10.1186/gb-2006-7-5-r43
    • (2006) Genome Biol , vol.7
    • Blomme, T.1    Vandepoele, K.2    De Bodt, S.3    Simillion, C.4    Maere, S.5    Van de Peer, Y.6
  • 15
    • 0442323217 scopus 로고    scopus 로고
    • Differential loss of ancestral gene families as a source of genomic divergence in animals
    • 1809979 15101434 10.1098/rsbl.2003.0124
    • Hughes AL Friedman R Differential loss of ancestral gene families as a source of genomic divergence in animals. Proc Biol Sci 2004 271 Suppl 3 S107-109 1809979 15101434 10.1098/rsbl.2003.0124
    • (2004) Proc Biol Sci , vol.271
    • Hughes, A.L.1    Friedman, R.2
  • 17
    • 33750467113 scopus 로고    scopus 로고
    • Molecular and phylogenetic analyses reveal mammalian-like clockwork in the honey bee (Apis mellifera) and shed new light on the molecular evolution of the circadian clock
    • 1626637 17065608 10.1101/gr.5094806
    • Rubin EB Shemesh Y Cohen M Elgavish S Robertson HM Bloch G Molecular and phylogenetic analyses reveal mammalian-like clockwork in the honey bee (Apis mellifera) and shed new light on the molecular evolution of the circadian clock. Genome Res 2006 16 1352-1365 1626637 17065608 10.1101/ gr.5094806
    • (2006) Genome Res , vol.16 , pp. 1352-1365
    • Rubin, E.B.1    Shemesh, Y.2    Cohen, M.3    Elgavish, S.4    Robertson, H.M.5    Bloch, G.6
  • 18
    • 20444407674 scopus 로고    scopus 로고
    • Consistency of genome-based methods in measuring Metazoan evolution
    • 10.1016/j.febslet.2005.04.006 15943981
    • Zdobnov EM Mering C Letunic I Bork P Consistency of genome-based methods in measuring Metazoan evolution. FEBS Lett 2005 579 3355-3361 10.1016/ j.febslet.2005.04.006 15943981
    • (2005) FEBS Lett , vol.579 , pp. 3355-3361
    • Zdobnov, E.M.1    Mering, C.2    Letunic, I.3    Bork, P.4
  • 19
    • 33750526053 scopus 로고    scopus 로고
    • Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects
    • 1626634 17065606 10.1101/gr.5204306
    • Savard J Tautz D Richards S Weinstock GM Gibbs RA Werren JH Tettelin H Lercher MJ Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Genome Res 2006 16 1334 1626634 17065606 10.1101/gr.5204306
    • (2006) Genome Res , vol.16 , pp. 1334
    • Savard, J.1    Tautz, D.2    Richards, S.3    Weinstock, G.M.4    Gibbs, R.A.5    Werren, J.H.6    Tettelin, H.7    Lercher, M.J.8
  • 20
    • 13244292984 scopus 로고    scopus 로고
    • Shifted, the Drosophila ortholog of Wnt inhibitory factor-1, controls the distribution and movement of Hedgehog
    • 10.1016/j.devcel.2005.01.003 15691766
    • Glise B Miller CA Crozatier M Halbisen MA Wise S Olson DJ Vincent A Blair SS Shifted, the Drosophila ortholog of Wnt inhibitory factor-1, controls the distribution and movement of Hedgehog. Dev Cell 2005 8 255-266 10.1016/j.devcel.2005.01.003 15691766
    • (2005) Dev Cell , vol.8 , pp. 255-266
    • Glise, B.1    Miller, C.A.2    Crozatier, M.3    Halbisen, M.A.4    Wise, S.5    Olson, D.J.6    Vincent, A.7    Blair, S.S.8
  • 21
    • 0028306979 scopus 로고
    • Genetic dissection of mechanosensory transduction: Mechanoreception-defective mutations of Drosophila
    • 10.1016/0896-6273(94)90437-5 8011334
    • Kernan M Cowan D Zuker C Genetic dissection of mechanosensory transduction: Mechanoreception-defective mutations of Drosophila. Neuron 1994 12 1195-1206 10.1016/0896-6273(94)90437-5 8011334
    • (1994) Neuron , vol.12 , pp. 1195-1206
    • Kernan, M.1    Cowan, D.2    Zuker, C.3
  • 22
    • 84928622733 scopus 로고    scopus 로고
    • The Interactive Fly
    • The Interactive Fly http://www.sdbonline.org/fly/segment/shifted4.htm
  • 24
    • 33750533396 scopus 로고    scopus 로고
    • Canonical TTAGG-repeat telomeres and telomerase in the honey bee, Apis mellifera
    • 1626636 17065609 10.1101/gr.5085606
    • Robertson HM Gordon KHJ Canonical TTAGG-repeat telomeres and telomerase in the honey bee, Apis mellifera. Genome Res 2006 16 1345 1626636 17065609 10.1101/gr.5085606
    • (2006) Genome Res , vol.16 , pp. 1345
    • Robertson, H.M.1    Gordon, K.H.J.2
  • 25
    • 0033551248 scopus 로고    scopus 로고
    • Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
    • 16324 10200254 10.1073/pnas.96.8.4285
    • Pellegrini M Marcotte EM Thompson MJ Eisenberg D Yeates TO Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles. Proc Natl Acad Sci USA 1999 96 4285-4288 16324 10200254 10.1073/pnas.96.8.4285
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 4285-4288
    • Pellegrini, M.1    Marcotte, E.M.2    Thompson, M.J.3    Eisenberg, D.4    Yeates, T.O.5
  • 26
    • 0034633626 scopus 로고    scopus 로고
    • Lineage-specific loss and divergence of functionally linked genes in eukaryotes
    • 17198 1016957 10.1073/pnas.200346997
    • Aravind L Watanabe H Lipman DJ Koonin EV Lineage-specific loss and divergence of functionally linked genes in eukaryotes. Proc Natl Acad Sci USA 2000 97 11319-11324 17198 1016957 10.1073/pnas.200346997
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 11319-11324
    • Aravind, L.1    Watanabe, H.2    Lipman, D.J.3    Koonin, E.V.4
  • 27
    • 55449127787 scopus 로고    scopus 로고
    • Predicting functional gene links from phylogenetic-statistical analyses of whole genomes
    • 10.1371/journal.pcbi.0010003
    • Barker D Pagel M Predicting functional gene links from phylogenetic-statistical analyses of whole genomes. Plos Comput Biol 2005 1 24-31 10.1371/journal.pcbi.0010003
    • (2005) Plos Comput Biol , vol.1 , pp. 24-31
    • Barker, D.1    Pagel, M.2
  • 29
    • 23144464901 scopus 로고    scopus 로고
    • WebGestalt: An integrated system for exploring gene sets in various biological contexts
    • 1160236 15980575 10.1093/nar/gki475
    • Zhang B Kirov S Snoddy J WebGestalt: An integrated system for exploring gene sets in various biological contexts. Nucleic Acids Res 2005 33 W741-W748 1160236 15980575 10.1093/nar/gki475
    • (2005) Nucleic Acids Res , vol.33
    • Zhang, B.1    Kirov, S.2    Snoddy, J.3
  • 30
    • 26844431946 scopus 로고    scopus 로고
    • Splicing of a rare class of introns by the U12-dependent spliceosome
    • 10.1515/BC.2005.084 16201866
    • Will CL Luhrmann R Splicing of a rare class of introns by the U12-dependent spliceosome. Biol Chem 2005 386 713-724 10.1515/ BC.2005.084 16201866
    • (2005) Biol Chem , vol.386 , pp. 713-724
    • Will, C.L.1    Luhrmann, R.2
  • 32
    • 3042791298 scopus 로고    scopus 로고
    • Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila
    • 470718 15210936 10.1073/pnas.0403400101
    • Schneider C Will CL Brosius J Frilander MJ Luhrmann R Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila. Proc Natl Acad Sci USA 2004 101 9584-9589 470718 15210936 10.1073/pnas.0403400101
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9584-9589
    • Schneider, C.1    Will, C.L.2    Brosius, J.3    Frilander, M.J.4    Luhrmann, R.5
  • 33
    • 33845873071 scopus 로고    scopus 로고
    • Spliceosomal small nuclear RNA genes in 11 insect genomes
    • 1705759 17095541 10.1261/rna.259207
    • Mount SM Gotea V Lin CF Hernandez K Makalowski W Spliceosomal small nuclear RNA genes in 11 insect genomes. RNA 2007 13 5-14 1705759 17095541 10.1261/rna.259207
    • (2007) RNA , vol.13 , pp. 5-14
    • Mount, S.M.1    Gotea, V.2    Lin, C.F.3    Hernandez, K.4    Makalowski, W.5
  • 35
    • 32544432195 scopus 로고    scopus 로고
    • Interaction of the cytosolic domains of sorLA/LR11 with the amyloid precursor protein (APP) and beta-secretase beta-site APP-cleaving enzyme
    • 10.1523/JNEUROSCI.3882-05.2006 16407538
    • Spoelgen R von Arnim CA Thomas AV Peltan ID Koker M Deng A Irizarry MC Andersen OM Willnow TE Hyman BT Interaction of the cytosolic domains of sorLA/LR11 with the amyloid precursor protein (APP) and beta-secretase beta-site APP-cleaving enzyme. J Neurosci 2006 26 418-428 10.1523/ JNEUROSCI.3882-05.2006 16407538
    • (2006) J Neurosci , vol.26 , pp. 418-428
    • Spoelgen, R.1    von Arnim, C.A.2    Thomas, A.V.3    Peltan, I.D.4    Koker, M.5    Deng, A.6    Irizarry, M.C.7    Andersen, O.M.8    Willnow, T.E.9    Hyman, B.T.10
  • 36
    • 0035997368 scopus 로고    scopus 로고
    • DNA replication in eukaryotic cells
    • 10.1146/annurev.biochem.71.110601.135425 12045100
    • Bell SP Dutta A DNA replication in eukaryotic cells. Annu Rev Biochem 2002 71 333-374 10.1146/annurev.biochem.71.110601.135425 12045100
    • (2002) Annu Rev Biochem , vol.71 , pp. 333-374
    • Bell, S.P.1    Dutta, A.2
  • 37
    • 2942750119 scopus 로고    scopus 로고
    • Targeted inactivation of testicular nuclear orphan receptor 4 delays and disrupts late meiotic prophase and subsequent meiotic divisions of spermatogenesis
    • 10.1128/MCB.24.13.5887-5899.2004
    • Mu X Lee YF Liu NC Chen YT Kim E Shyr CR Chang C Targeted inactivation of testicular nuclear orphan receptor 4 delays and disrupts late meiotic prophase and subsequent meiotic divisions of spermatogenesis. Mol Cell Biol 2003 24 5887-5899 10.1128/MCB.24.13.5887-5899.2004
    • (2003) Mol Cell Biol , vol.24 , pp. 5887-5899
    • Mu, X.1    Lee, Y.F.2    Liu, N.C.3    Chen, Y.T.4    Kim, E.5    Shyr, C.R.6    Chang, C.7
  • 38
    • 0031006539 scopus 로고    scopus 로고
    • mcm5/cdc46-bob1 bypasses the requirement for the S phase activator Cdc7p
    • 20337 9096361 10.1073/pnas.94.7.3151
    • Hardy CFJ Dryga O Seematter S Pahl PMB Sclafani RA mcm5/cdc46-bob1 bypasses the requirement for the S phase activator Cdc7p. Proc Natl Acad Sci USA 1997 94 3151-3155 20337 9096361 10.1073/pnas.94.7.3151
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 3151-3155
    • Hardy, C.F.J.1    Dryga, O.2    Seematter, S.3    Pahl, P.M.B.4    Sclafani, R.A.5
  • 40
    • 4444266487 scopus 로고    scopus 로고
    • The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes
    • 395765 15003118 10.1186/gb-2004-5-3-r15
    • Sheps JA Ralph S Zhao ZY Baillie DL Ling V The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes. Genome Biol 2004 5 R15 395765 15003118 10.1186/gb-2004-5-3-r15
    • (2004) Genome Biol , vol.5
    • Sheps, J.A.1    Ralph, S.2    Zhao, Z.Y.3    Baillie, D.L.4    Ling, V.5
  • 43
    • 0036167107 scopus 로고    scopus 로고
    • Drosophila innate immunity: An evolutionary perspective
    • 10.1038/ni0202-121 11812988
    • Hoffmann JA Reichhart JM Drosophila innate immunity: An evolutionary perspective. Nat Immunol 2002 3 121-126 10.1038/ni0202-121 11812988
    • (2002) Nat Immunol , vol.3 , pp. 121-126
    • Hoffmann, J.A.1    Reichhart, J.M.2
  • 44
    • 3543047297 scopus 로고    scopus 로고
    • Fbx7 functions in the SCF complex regulating Cdk1-cyclin B-phosphorylated hepatoma up-regulated protein (HURP) proteolysis by a proline-rich region
    • 10.1074/jbc.M404950200
    • Hsu JM Lee YC Yu CT Huang CY Fbx7 functions in the SCF complex regulating Cdk1-cyclin B-phosphorylated hepatoma up-regulated protein (HURP) proteolysis by a proline-rich region. Biol Chem 2004 279 32592-32602 10.1074/jbc.M404950200
    • (2004) Biol Chem , vol.279 , pp. 32592-32602
    • Hsu, J.M.1    Lee, Y.C.2    Yu, C.T.3    Huang, C.Y.4
  • 45
    • 27144506205 scopus 로고    scopus 로고
    • Transforming activity of Fbxo7 is mediated specifically through regulation of cyclin D/cdk6
    • 1201355 16096642 10.1038/sj.emboj.7600775
    • Laman H Funes JM Ye H Henderson S Galinanes-Garcia L Hara E Knowles P McDonald N Boshoff C Transforming activity of Fbxo7 is mediated specifically through regulation of cyclin D/cdk6. EMBO J 2005 24 3104-3116 1201355 16096642 10.1038/sj.emboj.7600775
    • (2005) EMBO J , vol.24 , pp. 3104-3116
    • Laman, H.1    Funes, J.M.2    Ye, H.3    Henderson, S.4    Galinanes-Garcia, L.5    Hara, E.6    Knowles, P.7    McDonald, N.8    Boshoff, C.9
  • 46
    • 0034283029 scopus 로고    scopus 로고
    • The Drosophila cyclin D-cdk4 complex promotes cellular growth
    • 302080 10970848 10.1093/emboj/19.17.4543
    • Datar SA Jacobs HW de la Cruz AFA Lehner CF Edgar BA The Drosophila cyclin D-cdk4 complex promotes cellular growth. EMBO J 2000 19 4543-4554 302080 10970848 10.1093/emboj/19.17.4543
    • (2000) EMBO J , vol.19 , pp. 4543-4554
    • Datar, S.A.1    Jacobs, H.W.2    de la Cruz, A.F.A.3    Lehner, C.F.4    Edgar, B.A.5
  • 47
    • 0034282517 scopus 로고    scopus 로고
    • Drosophila Cdk4 is required for normal growth and is dispensable for cell cycle progression
    • 302073 10970847 10.1093/emboj/19.17.4533
    • Meyer CA Jacobs HW Datar SA Du W Edgar BA Lehner CF Drosophila Cdk4 is required for normal growth and is dispensable for cell cycle progression. EMBO J 2000 19 4533-4542 302073 10970847 10.1093/emboj/ 19.17.4533
    • (2000) EMBO J , vol.19 , pp. 4533-4542
    • Meyer, C.A.1    Jacobs, H.W.2    Datar, S.A.3    Du, W.4    Edgar, B.A.5    Lehner, C.F.6
  • 50
    • 0347033256 scopus 로고    scopus 로고
    • Role of duplicate genes in genetic robustness against null mutations
    • 10.1038/nature01198 12511954
    • Gu Z Steinmetz LM Gu X Scharfe C Davis RW Li WH Role of duplicate genes in genetic robustness against null mutations. Nature 2003 421 63-66 10.1038/nature01198 12511954
    • (2003) Nature , vol.421 , pp. 63-66
    • Gu, Z.1    Steinmetz, L.M.2    Gu, X.3    Scharfe, C.4    Davis, R.W.5    Li, W.H.6
  • 51
    • 0003385172 scopus 로고
    • Selective constraint in protein polymorphism: Study of the effectively neutral mutation model by using an improved pseudosampling method
    • 393525 6573657 10.1073/pnas.80.4.1048
    • Kimura M Takahata N Selective constraint in protein polymorphism: Study of the effectively neutral mutation model by using an improved pseudosampling method. Proc Natl Acad Sci USA 1983 80 1048-1052 393525 6573657 10.1073/pnas.80.4.1048
    • (1983) Proc Natl Acad Sci USA , vol.80 , pp. 1048-1052
    • Kimura, M.1    Takahata, N.2
  • 52
    • 0015722319 scopus 로고
    • Slightly deleterious mutant substitutions in evolution
    • 10.1038/246096a0 4585855
    • Ohta T Slightly deleterious mutant substitutions in evolution. Nature 1973 246 96-98 10.1038/246096a0 4585855
    • (1973) Nature , vol.246 , pp. 96-98
    • Ohta, T.1
  • 53
    • 33646182934 scopus 로고    scopus 로고
    • An integrated view of protein evolution
    • 10.1038/nrg1838 16619049
    • Pál C Papp B Lercher MJ An integrated view of protein evolution. Nat Rev Genet 2006 7 337-348 10.1038/nrg1838 16619049
    • (2006) Nat Rev Genet , vol.7 , pp. 337-348
    • Pál, C.1    Papp, B.2    Lercher, M.J.3
  • 54
    • 0030000951 scopus 로고    scopus 로고
    • Excess amino acid polymorphism in mitochondrial DNA: Contrasts among genes from Drosophila, mice, and humans
    • 8754210
    • Rand DM Kann LM Excess amino acid polymorphism in mitochondrial DNA: contrasts among genes from Drosophila, mice, and humans. Mol Biol Evol 1996 13 735-748 8754210
    • (1996) Mol Biol Evol , vol.13 , pp. 735-748
    • Rand, D.M.1    Kann, L.M.2
  • 55
    • 0014831951 scopus 로고
    • Evolution of higher-organism DNA
    • Kohne DE Evolution of higher-organism DNA. Quart Rev Biophys 1970 3 327-375
    • (1970) Quart Rev Biophys , vol.3 , pp. 327-375
    • Kohne, D.E.1
  • 56
    • 22944437097 scopus 로고    scopus 로고
    • Molecular clocks: Four decades of evolution
    • 10.1038/nrg1659 16136655
    • Kumar S Molecular clocks: Four decades of evolution. Nat Rev Genet 2005 6 654-662 10.1038/nrg1659 16136655
    • (2005) Nat Rev Genet , vol.6 , pp. 654-662
    • Kumar, S.1
  • 57
    • 0029661331 scopus 로고    scopus 로고
    • Does evolutionary plasticity evolve?
    • 10.2307/2410642
    • Wagner A Does evolutionary plasticity evolve? Evolution 1996 50 1008-1023 10.2307/2410642
    • (1996) Evolution , vol.50 , pp. 1008-1023
    • Wagner, A.1
  • 58
    • 4143091655 scopus 로고    scopus 로고
    • Evolvability is a selectable trait
    • 511006 15289608 10.1073/pnas.0404656101
    • Earl DJ Deem MW Evolvability is a selectable trait. Proc Natl Acad Sci USA 2004 101 11531-11536 511006 15289608 10.1073/pnas.0404656101
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 11531-11536
    • Earl, D.J.1    Deem, M.W.2
  • 59
  • 60
    • 33845670418 scopus 로고    scopus 로고
    • Quantification of insect genome divergence
    • 10.1016/j.tig.2006.10.004 17097187
    • Zdobnov EM Bork P Quantification of insect genome divergence. Trends Genet 2007 23 16-20 10.1016/j.tig.2006.10.004 17097187
    • (2007) Trends Genet , vol.23 , pp. 16-20
    • Zdobnov, E.M.1    Bork, P.2
  • 61
    • 23144452802 scopus 로고    scopus 로고
    • PARALIGN: Rapid and sensitive sequence similarity searches powered by parallel computing technology
    • 1160184 15980529 10.1093/nar/gki423
    • Saebo PE Andersen SM Myrseth J Laerdahl JK Rognes T PARALIGN: Rapid and sensitive sequence similarity searches powered by parallel computing technology. Nucleic Acids Res 2005 33 W535-539 1160184 15980529 10.1093/ nar/gki423
    • (2005) Nucleic Acids Res , vol.33
    • Saebo, P.E.1    Andersen, S.M.2    Myrseth, J.3    Laerdahl, J.K.4    Rognes, T.5
  • 62
    • 0030660581 scopus 로고    scopus 로고
    • A genomic perspective on protein families
    • 10.1126/science.278.5338.631 9381173
    • Tatusov RL Koonin EV Lipman DJ A genomic perspective on protein families. Science 1997 278 631-637 10.1126/science.278.5338.631 9381173
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1    Koonin, E.V.2    Lipman, D.J.3
  • 63
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
    • 10.1093/bioinformatics/btl158 16731699
    • Li W Godzik A Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 2006 22 1658-1659 10.1093/bioinformatics/btl158 16731699
    • (2006) Bioinformatics , vol.22 , pp. 1658-1659
    • Li, W.1    Godzik, A.2
  • 64
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • 390337 15034147 10.1093/nar/gkh340
    • Edgar RC MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 2004 32 1792-1797 390337 15034147 10.1093/ nar/gkh340
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 65
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
    • 10742046
    • Castresana J Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 2000 17 540-552 10742046
    • (2000) Mol Biol Evol , vol.17 , pp. 540-552
    • Castresana, J.1
  • 66
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • 10.1080/10635150390235520 14530136
    • Guindon S Gascuel O A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003 52 696-704 10.1080/10635150390235520 14530136
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 67
    • 0036205377 scopus 로고    scopus 로고
    • TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
    • 10.1093/bioinformatics/18.3.502 11934758
    • Schmidt HA Strimmer K Vingron M von Haeseler A TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 2002 18 502-504 10.1093/bioinformatics/18.3.502 11934758
    • (2002) Bioinformatics , vol.18 , pp. 502-504
    • Schmidt, H.A.1    Strimmer, K.2    Vingron, M.3    von Haeseler, A.4
  • 68
    • 0032580152 scopus 로고    scopus 로고
    • A molecular timescale for vertebrate evolution
    • 10.1038/31927 9582070
    • Kumar S Hedges SB A molecular timescale for vertebrate evolution. Nature 1998 392 917-920 10.1038/31927 9582070
    • (1998) Nature , vol.392 , pp. 917-920
    • Kumar, S.1    Hedges, S.B.2
  • 69
    • 0036846746 scopus 로고    scopus 로고
    • The origin and evolution of model organisms
    • 10.1038/nrg929 12415314
    • Hedges SB The origin and evolution of model organisms. Nat Rev Genet 2002 3 838-849 10.1038/nrg929 12415314
    • (2002) Nat Rev Genet , vol.3 , pp. 838-849
    • Hedges, S.B.1
  • 70
    • 46349088839 scopus 로고    scopus 로고
    • Baylor College of Medicine Blast Server: T. castaneum http://www.hgsc.bcm.tmc.edu/blast/blast.cgi?organism=Tcastaneum
  • 71
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • 102409 10592173 10.1093/nar/28.1.27
    • Kanehisa M Goto S KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res 2000 28 27-30 102409 10592173 10.1093/nar/28.1.27
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 75
    • 0040920369 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Man
    • Online Mendelian Inheritance in Man http://www.ncbi.nlm.nih.gov/omim
  • 76
    • 28444482840 scopus 로고    scopus 로고
    • Maternal torso signaling controls body axis elongation in a short germ insect
    • 10.1016/j.cub.2005.10.036 16332539
    • Schoppmeier M Schröder R Maternal torso signaling controls body axis elongation in a short germ insect. Curr Biol 2005 15 2131-2136 10.1016/j.cub.2005.10.036 16332539
    • (2005) Curr Biol , vol.15 , pp. 2131-2136
    • Schoppmeier, M.1    Schröder, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.