-
1
-
-
3042848954
-
Crystal structure of a self-splicing group I intron with both exons
-
Adams PL, Stahley MR, Kosek AB, Wang J, Strobel SA (2004). Crystal structure of a self-splicing group I intron with both exons. Nature 430: 45-50.
-
(2004)
Nature
, vol.430
, pp. 45-50
-
-
Adams, P.L.1
Stahley, M.R.2
Kosek, A.B.3
Wang, J.4
Strobel, S.A.5
-
2
-
-
0034667684
-
Plasticity, evolvability, and modularity in RNA
-
Ancel LW, Fontana W (2000). Plasticity, evolvability, and modularity in RNA. J Experim Zool 288: 242-283.
-
(2000)
J Experim Zool
, vol.288
, pp. 242-283
-
-
Ancel, L.W.1
Fontana, W.2
-
3
-
-
0027488624
-
Isolation of new ribozymes from a large pool of random sequences
-
Bartel DP, Szostak JW (1993). Isolation of new ribozymes from a large pool of random sequences. Science 261: 1411-1418.
-
(1993)
Science
, vol.261
, pp. 1411-1418
-
-
Bartel, D.P.1
Szostak, J.W.2
-
4
-
-
33748561154
-
Thermal force approach to molecular evolution
-
Braun D, Libchaber A (2004). Thermal force approach to molecular evolution. Phys Biol 1: P1-P8.
-
(2004)
Phys Biol
, vol.1
-
-
Braun, D.1
Libchaber, A.2
-
5
-
-
0028675028
-
A DNA enzyme that cleaves RNA
-
Breaker RR, Joyce GF (1994). A DNA enzyme that cleaves RNA. Chem Biol 1: 223-229.
-
(1994)
Chem Biol
, vol.1
, pp. 223-229
-
-
Breaker, R.R.1
Joyce, G.F.2
-
6
-
-
0037266789
-
Gene duplication and other evolutionary strategies: From the RNA world to the future
-
Brosius J (2003). Gene duplication and other evolutionary strategies: from the RNA world to the future. J Struct Funct Genomics 3: 1-17.
-
(2003)
J Struct Funct Genomics
, vol.3
, pp. 1-17
-
-
Brosius, J.1
-
8
-
-
85047681854
-
Origins of the machinery of recombination and sex
-
Cavalier-Smith T (2002). Origins of the machinery of recombination and sex. Heredity 88: 125-141.
-
(2002)
Heredity
, vol.88
, pp. 125-141
-
-
Cavalier-Smith, T.1
-
9
-
-
1242274330
-
A guide to ions and RNA structure
-
Draper DE (2004). A guide to ions and RNA structure. RNA 10: 335-343.
-
(2004)
RNA
, vol.10
, pp. 335-343
-
-
Draper, D.E.1
-
10
-
-
0037108885
-
Error catastrophe and antiviral strategy
-
Eigen M (2002). Error catastrophe and antiviral strategy. Proc Natl Acad Sci USA 99: 13374-13376.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 13374-13376
-
-
Eigen, M.1
-
11
-
-
0017667182
-
-
Eigen M, Schuster P (1977). The hypercycle. Naturwissenschaften 64: 541-565.
-
Eigen M, Schuster P (1977). The hypercycle. Naturwissenschaften 64: 541-565.
-
-
-
-
12
-
-
0032577365
-
Continuity in evolution: On the nature of transitions
-
Fontana W, Schuster P (1998). Continuity in evolution: on the nature of transitions. Science 280: 1451-1455.
-
(1998)
Science
, vol.280
, pp. 1451-1455
-
-
Fontana, W.1
Schuster, P.2
-
13
-
-
36849148382
-
The RNA world
-
Gilbert W (1986). The RNA world. Nature 319: 618.
-
(1986)
Nature
, vol.319
, pp. 618
-
-
Gilbert, W.1
-
14
-
-
33747378836
-
Self-assembly of a group I intron from inactive oligonucleotide fragments
-
Hayden EJ, Lehman N (2006). Self-assembly of a group I intron from inactive oligonucleotide fragments. Chem Biol 13: 909-918.
-
(2006)
Chem Biol
, vol.13
, pp. 909-918
-
-
Hayden, E.J.1
Lehman, N.2
-
16
-
-
23244442274
-
Trans insertion-splicing: Ribozyme-catalyzed insertion of targeted sequences into RNAs
-
Johnson AK, Sinha J, Testa SM (2005). Trans insertion-splicing: ribozyme-catalyzed insertion of targeted sequences into RNAs. Biochemistry 44: 10702-10710.
-
(2005)
Biochemistry
, vol.44
, pp. 10702-10710
-
-
Johnson, A.K.1
Sinha, J.2
Testa, S.M.3
-
17
-
-
0035906978
-
RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension
-
Johnston WK, Unrau PJ, Lawrence MS, Glasner ME, Bartel DP (2001). RNA-catalyzed RNA polymerization: accurate and general RNA-templated primer extension. Science 292: 1319-1325.
-
(2001)
Science
, vol.292
, pp. 1319-1325
-
-
Johnston, W.K.1
Unrau, P.J.2
Lawrence, M.S.3
Glasner, M.E.4
Bartel, D.P.5
-
18
-
-
33646080332
-
Progress toward understanding the origin of the RNA world
-
Gesteland RF, Cech TR, Atkins JF eds, 3rd edn. Cold Spring Harbor Press: Cold Spring Harbor. pp
-
Joyce GF, Orgel LE (2006). Progress toward understanding the origin of the RNA world. In: Gesteland RF, Cech TR, Atkins JF (eds). The RNA World, 3rd edn. Cold Spring Harbor Press: Cold Spring Harbor. pp 23-56.
-
(2006)
The RNA World
, pp. 23-56
-
-
Joyce, G.F.1
Orgel, L.E.2
-
19
-
-
33847036990
-
Strategies for silencing human disease using RNA interference
-
Kim DH, Rossi JJ (2007). Strategies for silencing human disease using RNA interference. Nat Rev Genet 8: 173-184.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 173-184
-
-
Kim, D.H.1
Rossi, J.J.2
-
20
-
-
33748325570
-
Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
-
Kline DJ, Ferré-D'Amaré AR (2006). Structural basis of glmS ribozyme activation by glucosamine-6-phosphate. Science 313: 1752-1756.
-
(2006)
Science
, vol.313
, pp. 1752-1756
-
-
Kline, D.J.1
Ferré-D'Amaré, A.R.2
-
21
-
-
33847682251
-
Charge density of divalent metal cations determines RNA stability
-
Koculi E, Hyeon C, Thirumalai D, Woodson SA (2007). Charge density of divalent metal cations determines RNA stability. J Am Chem Soc 129: 2676-2682.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 2676-2682
-
-
Koculi, E.1
Hyeon, C.2
Thirumalai, D.3
Woodson, S.A.4
-
23
-
-
0032732707
-
Characterization of the Azoarcus ribozyme: Tight binding to guanosine and substrate by an unusually small group I ribozyme
-
Kuo LY, Davidson LA, Pico S (1999). Characterization of the Azoarcus ribozyme: tight binding to guanosine and substrate by an unusually small group I ribozyme. Biochim Biophys Acta 1489: 281-292.
-
(1999)
Biochim Biophys Acta
, vol.1489
, pp. 281-292
-
-
Kuo, L.Y.1
Davidson, L.A.2
Pico, S.3
-
24
-
-
1842532411
-
Fast tidal cycling and the origin of life
-
Lathe R (2003). Fast tidal cycling and the origin of life. Icarus 168: 18-22.
-
(2003)
Icarus
, vol.168
, pp. 18-22
-
-
Lathe, R.1
-
25
-
-
0038369787
-
A case for the extreme antiquity of recombination
-
Lehman N (2003). A case for the extreme antiquity of recombination. J Mol Evol 56: 770-777.
-
(2003)
J Mol Evol
, vol.56
, pp. 770-777
-
-
Lehman, N.1
-
26
-
-
23844514076
-
Structure of a synaptic γδ resolvase tetramer covalently linked to two cleaved DNAs
-
Li W, Kamtekar S, Xiong Y, Sarkis GJ, Grindley NDF, Steitz TA (2005). Structure of a synaptic γδ resolvase tetramer covalently linked to two cleaved DNAs. Science 309: 1210-1215.
-
(2005)
Science
, vol.309
, pp. 1210-1215
-
-
Li, W.1
Kamtekar, S.2
Xiong, Y.3
Sarkis, G.J.4
Grindley, N.D.F.5
Steitz, T.A.6
-
27
-
-
0027428093
-
The mutational meltdown in asexual populations
-
Lynch M, Burger R, Butcher D, Gabriel W (1993). The mutational meltdown in asexual populations. J Hered 84: 339-344.
-
(1993)
J Hered
, vol.84
, pp. 339-344
-
-
Lynch, M.1
Burger, R.2
Butcher, D.3
Gabriel, W.4
-
28
-
-
0034634395
-
The evolutionary fate and consequences of duplicated genes
-
Lynch M, Conery JS (2000). The evolutionary fate and consequences of duplicated genes. Science 290: 1151-1155.
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
30
-
-
33744790273
-
Prediction of RNA secondary structure by free energy minimization
-
Mathews DH, Turner DH (2006). Prediction of RNA secondary structure by free energy minimization. Curr Opin Struct Biol 16: 270-278.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 270-278
-
-
Mathews, D.H.1
Turner, D.H.2
-
31
-
-
0033758453
-
RNA folding argues against a hot-start origin of life
-
Moulton V, Gardner PP, Pointon RF, Creamer LK, Jameson GB, Penny D (2000). RNA folding argues against a hot-start origin of life. J Mol Evol 51: 416-421.
-
(2000)
J Mol Evol
, vol.51
, pp. 416-421
-
-
Moulton, V.1
Gardner, P.P.2
Pointon, R.F.3
Creamer, L.K.4
Jameson, G.B.5
Penny, D.6
-
32
-
-
0032563297
-
Folding intermediates of a selfsplicing RNA: Mispairing of the catalytic core
-
Pan J, Woodson SA (1998). Folding intermediates of a selfsplicing RNA: mispairing of the catalytic core. J Mol Biol 280: 597-609.
-
(1998)
J Mol Biol
, vol.280
, pp. 597-609
-
-
Pan, J.1
Woodson, S.A.2
-
33
-
-
32444448867
-
The biology of short RNAs
-
Gesteland RF, Cech TR, Atkins JF eds, 3rd edn. Cold Spring Harbor Press: Cold Spring Harbor. pp
-
Peterson CP, Doench JG, Grishok A, Sharp PA (2006). The biology of short RNAs. In: Gesteland RF, Cech TR, Atkins JF (eds). The RNA World, 3rd edn. Cold Spring Harbor Press: Cold Spring Harbor. pp 535-565.
-
(2006)
The RNA World
, pp. 535-565
-
-
Peterson, C.P.1
Doench, J.G.2
Grishok, A.3
Sharp, P.A.4
-
34
-
-
0002200325
-
RNA interaction with small ligands and peptides
-
Gesteland RF, Cech TR, Atkins JF eds, 2nd edn. Cold Spring Harbor Press: Cold Spring Harbor. pp
-
Puglisi JD, Williamson JR (1999). RNA interaction with small ligands and peptides. In: Gesteland RF, Cech TR, Atkins JF (eds). The RNA World, 2nd edn. Cold Spring Harbor Press: Cold Spring Harbor. pp 403-425.
-
(1999)
The RNA World
, pp. 403-425
-
-
Puglisi, J.D.1
Williamson, J.R.2
-
35
-
-
0037452797
-
Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme
-
Rangan P, Masquida B, Westhof E, Woodson SA (2003). Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme. Proc Natl Acad Sci USA 100: 1574-1579.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 1574-1579
-
-
Rangan, P.1
Masquida, B.2
Westhof, E.3
Woodson, S.A.4
-
36
-
-
0037180804
-
A ribozyme composed of only two different nucleotides
-
Reader JS, Joyce GF (2002). A ribozyme composed of only two different nucleotides. Nature 420: 841-844.
-
(2002)
Nature
, vol.420
, pp. 841-844
-
-
Reader, J.S.1
Joyce, G.F.2
-
37
-
-
0348136386
-
Generalized RNA-directed recombination of RNA
-
Riley CA, Lehman N (2003). Generalized RNA-directed recombination of RNA. Chem Biol 10: 1233-1243.
-
(2003)
Chem Biol
, vol.10
, pp. 1233-1243
-
-
Riley, C.A.1
Lehman, N.2
-
38
-
-
0034305821
-
DNA methylation in health and disease
-
Robertson KD, Wolffe AP (2000). DNA methylation in health and disease. Nat Rev Genet 1: 11-19.
-
(2000)
Nat Rev Genet
, vol.1
, pp. 11-19
-
-
Robertson, K.D.1
Wolffe, A.P.2
-
39
-
-
0034785862
-
A model for the γδ resolvase synaptic complex
-
Sarkis GJ, Murley LL, Leschziner AE, Boocock MR, Stark WM, Grindley ND (2001). A model for the γδ resolvase synaptic complex. Mol Cell 8: 623-631.
-
(2001)
Mol Cell
, vol.8
, pp. 623-631
-
-
Sarkis, G.J.1
Murley, L.L.2
Leschziner, A.E.3
Boocock, M.R.4
Stark, W.M.5
Grindley, N.D.6
-
40
-
-
0027180473
-
An RNA motif that binds ATP
-
Sassanfar M, Szostak JW (1993). An RNA motif that binds ATP. Nature 364: 550-553.
-
(1993)
Nature
, vol.364
, pp. 550-553
-
-
Sassanfar, M.1
Szostak, J.W.2
-
41
-
-
0033485559
-
Non-unity molecular heritability demonstrated by continuous evolution in vitro
-
Schmitt T, Lehman N (1999). Non-unity molecular heritability demonstrated by continuous evolution in vitro. Chem Biol 6: 857-869.
-
(1999)
Chem Biol
, vol.6
, pp. 857-869
-
-
Schmitt, T.1
Lehman, N.2
-
42
-
-
0034698298
-
One sequence, two ribozymes: Implications for the emergence of new ribozyme folds
-
Schultes EA, Bartel DP (2000). One sequence, two ribozymes: implications for the emergence of new ribozyme folds. Science 289: 448-452.
-
(2000)
Science
, vol.289
, pp. 448-452
-
-
Schultes, E.A.1
Bartel, D.P.2
-
43
-
-
33747051955
-
Extended molecular evolutionary biology: Artificial life bridging the gap between chemistry and biology
-
Schuster P (1994). Extended molecular evolutionary biology: artificial life bridging the gap between chemistry and biology. Artif Life 1: 39-60.
-
(1994)
Artif Life
, vol.1
, pp. 39-60
-
-
Schuster, P.1
-
44
-
-
33846486686
-
Accumulation of deleterious mutations in abiotic populations of RNA
-
Soll SJ, Díaz Arenas C, Lehman N (2007). Accumulation of deleterious mutations in abiotic populations of RNA. Genetics 175: 267-275.
-
(2007)
Genetics
, vol.175
, pp. 267-275
-
-
Soll, S.J.1
Díaz Arenas, C.2
Lehman, N.3
-
46
-
-
0026520507
-
What is the optimum size for the genetic alphabet?
-
Szathmáry E (1992). What is the optimum size for the genetic alphabet? Proc Natl Acad Sci USA 89: 2614-2618.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 2614-2618
-
-
Szathmáry, E.1
-
47
-
-
0029258928
-
Keeping RNA happy
-
Uhlenbeck OC (1995). Keeping RNA happy. RNA 1: 1-4.
-
(1995)
RNA
, vol.1
, pp. 1-4
-
-
Uhlenbeck, O.C.1
-
48
-
-
0034682505
-
Induction of wild-type p53 activity in human cancer cells by ribozymes that repair mutant p53 transcripts
-
Watanabe T, Sullenger BA (2000). Induction of wild-type p53 activity in human cancer cells by ribozymes that repair mutant p53 transcripts. Proc Natl Acad Sci USA 97: 8490-8494.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 8490-8494
-
-
Watanabe, T.1
Sullenger, B.A.2
-
49
-
-
1642586299
-
Control of gene expression by a natural metabolite-responsive ribozyme
-
Winkler WC, Nahvi A, Roth A, Collins JA, Breaker RR (2004). Control of gene expression by a natural metabolite-responsive ribozyme. Nature 428: 281-286.
-
(2004)
Nature
, vol.428
, pp. 281-286
-
-
Winkler, W.C.1
Nahvi, A.2
Roth, A.3
Collins, J.A.4
Breaker, R.R.5
-
50
-
-
0035344021
-
Yesterday's polyploids and the mystery of diploidization
-
Wolfe KH (2001). Yesterday's polyploids and the mystery of diploidization. Nat Rev Genet 2: 333-341.
-
(2001)
Nat Rev Genet
, vol.2
, pp. 333-341
-
-
Wolfe, K.H.1
-
51
-
-
34250860849
-
Selection of an improved RNA polymerase ribozyme with superior extension and fidelity
-
Zaher HS, Unrau PJ (2007). Selection of an improved RNA polymerase ribozyme with superior extension and fidelity. RNA 13: 1017-1026.
-
(2007)
RNA
, vol.13
, pp. 1017-1026
-
-
Zaher, H.S.1
Unrau, P.J.2
-
52
-
-
36549042404
-
Anitsense oligonucleotides: Target validation and development of systemically delivered therapeutic nanoparticles
-
Zhang C, Pei J, Kumar D, Sakabe I, Boudreau HE, Gokhale PC et al. (2007). Anitsense oligonucleotides: target validation and development of systemically delivered therapeutic nanoparticles. Methods Mol Biol 361: 163-185.
-
(2007)
Methods Mol Biol
, vol.361
, pp. 163-185
-
-
Zhang, C.1
Pei, J.2
Kumar, D.3
Sakabe, I.4
Boudreau, H.E.5
Gokhale, P.C.6
|