메뉴 건너뛰기




Volumn 134, Issue 11, 2007, Pages 1527-1539

Transcriptome analysis during the process of in vitro differentiation of Leishmania donovani using genomic microarrays

Author keywords

Differentially expressed genes; Genomic microarray; Kala azar; Leishmania donovani

Indexed keywords

PERMEASE; PHOSPHOTRANSFERASE; TRANSCRIPTOME;

EID: 36649011021     PISSN: 00311820     EISSN: 14698161     Source Type: Journal    
DOI: 10.1017/S003118200700296X     Document Type: Article
Times cited : (40)

References (42)
  • 2
    • 2342467942 scopus 로고    scopus 로고
    • Expression profiling using random genomic DNA microarray identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major
    • Akopyants, N. S., Matlibs, R. S., Bukanova, E. N., Smeds, M. R., Brownstein, B. H., Stormo, G. D. and Beverley, S. M. (2004). Expression profiling using random genomic DNA microarray identifies differentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major. Molecular and Biochemical Parasitology 136, 71-86.
    • (2004) Molecular and Biochemical Parasitology , vol.136 , pp. 71-86
    • Akopyants, N.S.1    Matlibs, R.S.2    Bukanova, E.N.3    Smeds, M.R.4    Brownstein, B.H.5    Stormo, G.D.6    Beverley, S.M.7
  • 4
    • 0141763731 scopus 로고    scopus 로고
    • Surface glycoprotein PSA (GP46) expression during short and long-term culture of Leishmania chagasi
    • Beetham, J. K., Donelson, J. E. and Dahlin, R. R. (2003). Surface glycoprotein PSA (GP46) expression during short and long-term culture of Leishmania chagasi. Molecular and Biochemical Parasitology 131, 109-117.
    • (2003) Molecular and Biochemical Parasitology , vol.131 , pp. 109-117
    • Beetham, J.K.1    Donelson, J.E.2    Dahlin, R.R.3
  • 5
    • 0037205486 scopus 로고    scopus 로고
    • A common mechanism of stage-regulated gene expression in Leishmania mediated by a conserved 3′-untranslated region element
    • Boucher, N., Wu, Y., Dumas, C., Dube, M., Sereno, D., Breton, M. and Papadopoulou, B. (2002). A common mechanism of stage-regulated gene expression in Leishmania mediated by a conserved 3′-untranslated region element. Journal of Biological Chemistry 277, 19511-19520.
    • (2002) Journal of Biological Chemistry , vol.277 , pp. 19511-19520
    • Boucher, N.1    Wu, Y.2    Dumas, C.3    Dube, M.4    Sereno, D.5    Breton, M.6    Papadopoulou, B.7
  • 6
    • 0029143254 scopus 로고    scopus 로고
    • High constitutive levels of heat-shock proteins in human-pathogenic parasites of the genus Leishmania
    • Brandau, S., Dresel, A. and Clos, J. (2003). High constitutive levels of heat-shock proteins in human-pathogenic parasites of the genus Leishmania. The Biochemical Journal 310, 225-232.
    • (2003) The Biochemical Journal , vol.310 , pp. 225-232
    • Brandau, S.1    Dresel, A.2    Clos, J.3
  • 8
    • 0025274399 scopus 로고
    • Isolation of genes showing increased or unique expression in the infective promastigotes of Leishmania major
    • Coulson, R. M. R. and Smith, D. F. (1990). Isolation of genes showing increased or unique expression in the infective promastigotes of Leishmania major. Molecular and Biochemical Parasitology 40, 63-76.
    • (1990) Molecular and Biochemical Parasitology , vol.40 , pp. 63-76
    • Coulson, R.M.R.1    Smith, D.F.2
  • 10
    • 0035174886 scopus 로고    scopus 로고
    • Worldwide increasing risk factors for leishmaniasis
    • Desjeux, P. (2001). Worldwide increasing risk factors for leishmaniasis. Medical Microbiology and Immunology 190, 77-79.
    • (2001) Medical Microbiology and Immunology , vol.190 , pp. 77-79
    • Desjeux, P.1
  • 16
    • 11144283257 scopus 로고    scopus 로고
    • Characterization of a developmentally regulated amino acid transporter gene from Leishmania amazonensis
    • Geraldo, M. V., Silber, A. M., Pereira, C. A. and Uliana, S. R. (2005). Characterization of a developmentally regulated amino acid transporter gene from Leishmania amazonensis. FEMS Microbiology Letters 242, 275-280.
    • (2005) FEMS Microbiology Letters , vol.242 , pp. 275-280
    • Geraldo, M.V.1    Silber, A.M.2    Pereira, C.A.3    Uliana, S.R.4
  • 17
    • 30544442263 scopus 로고    scopus 로고
    • Cloning and characterization of angiotensin converting enzyme related dipeptidylcarboxypeptidase from Leishmania donovani
    • Goyal, N., Duncan, R., Selvapandiyan, A., Debrabant, A., Baig, M. S. and Nakhasi, H. L. (2006). Cloning and characterization of angiotensin converting enzyme related dipeptidylcarboxypeptidase from Leishmania donovani. Molecular and Biochemical Parasitology 145, 147-157.
    • (2006) Molecular and Biochemical Parasitology , vol.145 , pp. 147-157
    • Goyal, N.1    Duncan, R.2    Selvapandiyan, A.3    Debrabant, A.4    Baig, M.S.5    Nakhasi, H.L.6
  • 18
    • 33644828887 scopus 로고    scopus 로고
    • Expression profiling by whole genome interspecies microarray hybridization reveals differential gene expression in procyclic promastigotes, lesion derived amastigotes and axenic amastigotes in Leishmania mexicana
    • Holzer, R. T., McMaster, W. R. and Forney, J. D. (2006). Expression profiling by whole genome interspecies microarray hybridization reveals differential gene expression in procyclic promastigotes, lesion derived amastigotes and axenic amastigotes in Leishmania mexicana. Molecular and Biochemical Parasitology 146, 198-218.
    • (2006) Molecular and Biochemical Parasitology , vol.146 , pp. 198-218
    • Holzer, R.T.1    McMaster, W.R.2    Forney, J.D.3
  • 19
    • 24744455622 scopus 로고    scopus 로고
    • Microarray analysis of host gene-expression during intracellular nests formation of Trypanosoma cruzi amastigotes
    • Imai, K., Mimori, T., Kawai, M. and Koga, H. (2005). Microarray analysis of host gene-expression during intracellular nests formation of Trypanosoma cruzi amastigotes. Microbiology and Immunology 49, 623-631.
    • (2005) Microbiology and Immunology , vol.49 , pp. 623-631
    • Imai, K.1    Mimori, T.2    Kawai, M.3    Koga, H.4
  • 20
    • 22244437571 scopus 로고    scopus 로고
    • Ivens, A. C, Peacock, C. S, Worthey, E. A, Murphy, L, Aggarwal, G, Berriman, M, Sisk, E, Rajandream, M. A, Adlem, E, Aert, R, Anupama, A, Apostolou, Z, Attipoe, P, Bason, N, Bauser, C, Beck, A, Beverley, S. M, Bianchettin, G, Borzym, K, Bothe, G, Bruschi, C. V, Collins, M, Cadag, E, Ciarloni, L, Clayton, C, Coulson, R. M, Cronin, A, Cruz, A. K, Davies, R. M, De Gaudenzi, J, Dobson, D. E, Duesterhoeft, A, Fazelina, G, Fosker, N, Frasch, A. C, Fraser, A, Fuchs, M, Gabel, C, Goble, A, Goffeau, A, Harris, D, Hertz-Fowler, C, Hilbert, H, Horn, D, Huang, Y, Klages, S, Knights, A, Kube, M, Larke, N, Litvin, L, Lord, A, Louie, T, Marra, M, Masuy, D, Matthews, S. K, Michaeli, S, Mottram, J. C, Muller-Auer, S, Munden, H, Nelson, S, Norbertczak, H, Oliver, K, O'neil, S, Pentony, M, Pohl, T. M, Price, C, Purnelle, B, Quail, M. A, Rabbinowitsch, E, Reinhardt, R, Rieger, M, Rinta, J, Robben, J, Robertson, L, Ruiz, J. C, Ru
    • Ivens, A. C., Peacock, C. S., Worthey, E. A., Murphy, L., Aggarwal, G., Berriman, M., Sisk, E., Rajandream, M. A., Adlem, E., Aert, R., Anupama, A., Apostolou, Z., Attipoe, P., Bason, N., Bauser, C., Beck, A., Beverley, S. M., Bianchettin, G., Borzym, K., Bothe, G., Bruschi, C. V., Collins, M., Cadag, E., Ciarloni, L., Clayton, C., Coulson, R. M., Cronin, A., Cruz, A. K., Davies, R. M., De Gaudenzi, J., Dobson, D. E., Duesterhoeft, A., Fazelina, G., Fosker, N., Frasch, A. C., Fraser, A., Fuchs, M., Gabel, C., Goble, A., Goffeau, A., Harris, D., Hertz-Fowler, C., Hilbert, H., Horn, D., Huang, Y., Klages, S., Knights, A., Kube, M., Larke, N., Litvin, L., Lord, A., Louie, T., Marra, M., Masuy, D., Matthews, S. K., Michaeli, S., Mottram, J. C., Muller-Auer, S., Munden, H., Nelson, S., Norbertczak, H., Oliver, K., O'neil, S., Pentony, M., Pohl, T. M., Price, C., Purnelle, B., Quail, M. A., Rabbinowitsch, E., Reinhardt, R., Rieger, M., Rinta, J., Robben, J., Robertson, L., Ruiz, J. C., Rutter, S., Saunders, D., Schafer, M., Schein, J., Schwartz, D. C., Seeger, K., Seyler, A., Sharp, S., Shin, H., Sivam, D., Squares, R., Squares, S., Tosato, V., Vogt, C., Volckaert, G., Wambutt, R., Warren, T., Wedler, H., Woodward, J., Zhou, S., Zimmermann, W., Smith, D. F., Blackwell, J. M., Stuart, K. D., Barrell, B. and Myler, P. J. (2005). The genome of the kinetoplastid parasite Leishmania major. Science 309, 436-442.
  • 21
    • 0027461089 scopus 로고
    • Cloning and characterization of differentially expressed genes from in vitro grown 'amastigotes' of Leishmania donovani
    • Joshi, M., Dwyer, D. M. and Nakhasi, H. L. (1993). Cloning and characterization of differentially expressed genes from in vitro grown 'amastigotes' of Leishmania donovani. Molecular and Biochemical Parasitology 58, 345-354.
    • (1993) Molecular and Biochemical Parasitology , vol.58 , pp. 345-354
    • Joshi, M.1    Dwyer, D.M.2    Nakhasi, H.L.3
  • 23
    • 0032513205 scopus 로고    scopus 로고
    • Leishmania donovani heat shock protein 100: Characterization and function in amastigote stage differentiation
    • Krobitsch, S., Brandau, S., Hoyer, C., Schmetz, C., Hubel, A. and Clos, J. (1998). Leishmania donovani heat shock protein 100: Characterization and function in amastigote stage differentiation. Journal of Biological Chemistry 273, 6488-6494.
    • (1998) Journal of Biological Chemistry , vol.273 , pp. 6488-6494
    • Krobitsch, S.1    Brandau, S.2    Hoyer, C.3    Schmetz, C.4    Hubel, A.5    Clos, J.6
  • 24
    • 3343010589 scopus 로고    scopus 로고
    • Genetic complementation of Leishmania deficient in PSA (GP46) restores their resistance to lysis by complement
    • Lincoln, L. M., Ozaki, M., Donelson, J. E. and Beetham, J. K. (2004). Genetic complementation of Leishmania deficient in PSA (GP46) restores their resistance to lysis by complement. Molecular and Biochemical Parasitology 137, 185-189.
    • (2004) Molecular and Biochemical Parasitology , vol.137 , pp. 185-189
    • Lincoln, L.M.1    Ozaki, M.2    Donelson, J.E.3    Beetham, J.K.4
  • 25
  • 26
    • 0032742402 scopus 로고    scopus 로고
    • Leishmania major proteophosphoglycan is expressed by amastigotes and has an immunomodulatory effect on macrophage function
    • Piani, A., Ilg, T., Elefanty, A. G., Curtis, J. and Handman, E. (1999). Leishmania major proteophosphoglycan is expressed by amastigotes and has an immunomodulatory effect on macrophage function. Microbes and Infection 1, 589-599.
    • (1999) Microbes and Infection , vol.1 , pp. 589-599
    • Piani, A.1    Ilg, T.2    Elefanty, A.G.3    Curtis, J.4    Handman, E.5
  • 27
    • 0033564567 scopus 로고    scopus 로고
    • Presence of a vacuolar H+ pyrophosphatase in promastigotes of Leishmania donovani and its localization to a different compartment from the vacuolar H+ ATPase
    • Rodrigues, C. O., Scott, D. A. and Docampo, R. (1999). Presence of a vacuolar H+ pyrophosphatase in promastigotes of Leishmania donovani and its localization to a different compartment from the vacuolar H+ ATPase. The Biochemical Journal 340, 759-766.
    • (1999) The Biochemical Journal , vol.340 , pp. 759-766
    • Rodrigues, C.O.1    Scott, D.A.2    Docampo, R.3
  • 28
    • 33646066009 scopus 로고    scopus 로고
    • Upregulation of surface proteins in Leishmania donovani isolated from patients of post-kala-azar dermal leishmaniasis
    • Salotra, P., Duncan, R. C., Singh, R., Subba Raju, B. V., Sreenivas, G. and Nakhasi, H. L. (2006). Upregulation of surface proteins in Leishmania donovani isolated from patients of post-kala-azar dermal leishmaniasis. Microbes and Infection 8, 637-644.
    • (2006) Microbes and Infection , vol.8 , pp. 637-644
    • Salotra, P.1    Duncan, R.C.2    Singh, R.3    Subba Raju, B.V.4    Sreenivas, G.5    Nakhasi, H.L.6
  • 29
    • 0035102992 scopus 로고    scopus 로고
    • Development of a species-specific PCR assay for detection of Leishmania donovani in clinical samples from patients with kala-azar and post-kala-azar dermal leishmaniasis
    • Salotra, P., Sreenivas, G., Pogue, G. P., Lee, N., Nakhasi, H. L., Ramesh, V. and Negi, N. S. (2001). Development of a species-specific PCR assay for detection of Leishmania donovani in clinical samples from patients with kala-azar and post-kala-azar dermal leishmaniasis. Journal of Clinical Microbiology 39, 849-854.
    • (2001) Journal of Clinical Microbiology , vol.39 , pp. 849-854
    • Salotra, P.1    Sreenivas, G.2    Pogue, G.P.3    Lee, N.4    Nakhasi, H.L.5    Ramesh, V.6    Negi, N.S.7
  • 30
    • 33846259286 scopus 로고    scopus 로고
    • Analysis of the Leishmania donovani transcriptome reveals an ordered progression of transient and permanent changes in gene expression during differentiation
    • doi:10.1016/j.molbiopara.2006.11. 011
    • Saxena, A., Lahav, T., Holland, N., Aggarwal, G., Anupama, A., Huang, Y., Volpin, H., Myler, P. J. and Zilberstein, D. (2007). Analysis of the Leishmania donovani transcriptome reveals an ordered progression of transient and permanent changes in gene expression during differentiation. Molecular and Biochemical Parasitology, doi:10.1016/j.molbiopara.2006.11. 011.
    • (2007) Molecular and Biochemical Parasitology
    • Saxena, A.1    Lahav, T.2    Holland, N.3    Aggarwal, G.4    Anupama, A.5    Huang, Y.6    Volpin, H.7    Myler, P.J.8    Zilberstein, D.9
  • 31
    • 0037836064 scopus 로고    scopus 로고
    • Evaluation of differential gene expression in Leishmania major Friedlin procyclics and metacyclics using DNA microarray analysis
    • Saxena, A., Worthey, E. A., Yan, S., Leland, A., Stuart, K. D. and Myler, P. J. (2003). Evaluation of differential gene expression in Leishmania major Friedlin procyclics and metacyclics using DNA microarray analysis. Molecular and Biochemical Parasitology 129, 103-114.
    • (2003) Molecular and Biochemical Parasitology , vol.129 , pp. 103-114
    • Saxena, A.1    Worthey, E.A.2    Yan, S.3    Leland, A.4    Stuart, K.D.5    Myler, P.J.6
  • 32
    • 2542462114 scopus 로고    scopus 로고
    • Arbitrary-primed PCR for genomic fingerprinting and identification of differentially regulated genes in Indian isolates of Leishmania donovani
    • Sreenivas, G., Singh, R., Selvapandian, A., Negi, N. S., Nakhasi, H. L. and Salotra, P. (2004). Arbitrary-primed PCR for genomic fingerprinting and identification of differentially regulated genes in Indian isolates of Leishmania donovani. Experimental Parasitology 106, 110-118.
    • (2004) Experimental Parasitology , vol.106 , pp. 110-118
    • Sreenivas, G.1    Singh, R.2    Selvapandian, A.3    Negi, N.S.4    Nakhasi, H.L.5    Salotra, P.6
  • 35
    • 0032080107 scopus 로고    scopus 로고
    • A mitogen-activated protein (MAP) kinase homologue of Leishmania mexicana is essential for parasite survival in the infected host
    • Wiese, M. (1998). A mitogen-activated protein (MAP) kinase homologue of Leishmania mexicana is essential for parasite survival in the infected host. The EMBO Journal 17, 2619-2628.
    • (1998) The EMBO Journal , vol.17 , pp. 2619-2628
    • Wiese, M.1
  • 36
    • 0042733004 scopus 로고    scopus 로고
    • Protein kinase involved in flagellar-length control
    • Wiese, M., Kuhn, D. D. and Grünfelder, C. G. (2003). Protein kinase involved in flagellar-length control. Eukaryotic Cell 2, 769-777.
    • (2003) Eukaryotic Cell , vol.2 , pp. 769-777
    • Wiese, M.1    Kuhn, D.D.2    Grünfelder, C.G.3
  • 37
    • 0033727540 scopus 로고    scopus 로고
    • A new developmentally regulated gene family in Leishmania amastigotes encoding a homolog of amastin surface proteins
    • Wu, Y., El-Fakhry, Y., Sereno, D., Tamar, S. and Papadopoulou, B. (2000). A new developmentally regulated gene family in Leishmania amastigotes encoding a homolog of amastin surface proteins. Molecular and Biochemical Parasitology 110, 345-357. www.geneDB.org
    • (2000) Molecular and Biochemical Parasitology , vol.110 , pp. 345-357
    • Wu, Y.1    El-Fakhry, Y.2    Sereno, D.3    Tamar, S.4    Papadopoulou, B.5
  • 38
    • 0141480200 scopus 로고    scopus 로고
    • Heat shock protein 90 as an endogenous protein enhancer of inducible nitric-oxide synthase
    • Yoshida, M. and Xia, Y. (2003). Heat shock protein 90 as an endogenous protein enhancer of inducible nitric-oxide synthase. Journal of Biological Chemistry 278, 36953-36958.
    • (2003) Journal of Biological Chemistry , vol.278 , pp. 36953-36958
    • Yoshida, M.1    Xia, Y.2
  • 40
    • 26844478297 scopus 로고    scopus 로고
    • Zamora-Veyl, F. B., Kroemer, M., Zander, D. and Clos, J. (2005). Stage-specific expression of the mitochondrial co-chaperonin of Leishmania donovani CPN10. Kinetoplastid Biology and Disease DOI: 10.1186/1475-9292-4-3.
    • Zamora-Veyl, F. B., Kroemer, M., Zander, D. and Clos, J. (2005). Stage-specific expression of the mitochondrial co-chaperonin of Leishmania donovani CPN10. Kinetoplastid Biology and Disease DOI: 10.1186/1475-9292-4-3.
  • 41
    • 0030841734 scopus 로고    scopus 로고
    • Loss of virulence in Leishmania donovani deficient in an amastigote-specific protein A2
    • Zhang, W. W. and Matlashewski, G. (1997). Loss of virulence in Leishmania donovani deficient in an amastigote-specific protein A2. Proceedings of the National Academy of Sciences, USA 94, 8807-8811.
    • (1997) Proceedings of the National Academy of Sciences, USA , vol.94 , pp. 8807-8811
    • Zhang, W.W.1    Matlashewski, G.2
  • 42
    • 0028061958 scopus 로고
    • The role of pH and temperature in the development of Leishmania parasites
    • Zilberstein, D. and Shapira, M. (1994). The role of pH and temperature in the development of Leishmania parasites. Annual Review of Microbiology 48, 449-470.
    • (1994) Annual Review of Microbiology , vol.48 , pp. 449-470
    • Zilberstein, D.1    Shapira, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.