Time-dependent molecular memory in single voltage-gated sodium channel

Journal of Membrane Biology

Volumn 219, Issue 1-3, 2007, Pages 19-36

  Nayak, Tapan K ^a   Sikdar, S K ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

Autocorrelation; Cell attached patch clamp; Conditioning depolarization; Molecular memory; Pseudoperiodic oscillation; Voltage gated sodium channel

Indexed keywords

VOLTAGE GATED SODIUM CHANNEL;

ANIMAL CELL; ARTICLE; CONDUCTANCE; CONTROLLED STUDY; FEMALE; FOURIER TRANSFORMATION; HIDDEN MARKOV MODEL; KINETICS; MEMBRANE DEPOLARIZATION; MOLECULAR DYNAMICS; NERVE EXCITABILITY; NONHUMAN; PATCH CLAMP; STATISTICAL ANALYSIS;

ANIMALS; CHO CELLS; CRICETINAE; CRICETULUS; ELECTROPHYSIOLOGY; FOURIER ANALYSIS; ION CHANNEL GATING; KINETICS; MARKOV CHAINS; MEMBRANE POTENTIALS; MODELS, BIOLOGICAL; PATCH-CLAMP TECHNIQUES; RATS; RECOMBINANT PROTEINS; SIGNAL TRANSDUCTION; SODIUM CHANNELS;

EID: 36648999558     PISSN: 00222631     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00232-007-9058-4     Document Type: Article

References (55)

1. Ahmed CM, Ware DH, Lee SC, Pattern CD, Ferrer-Montiel AV, Schinder AF, McPherson JD, Wagner CB, Wasmith JJ, Evans GA (1992) Primary structure, chromosomal localization and functional expression of voltage-gated sodium channel from human brain. Proc Natl Acad Sci USA 89:8220-8224
2. Aldrich RW, Corey DP, Stevens CF (1983) A reinterpretation of sodium channel gating based on single-channel recording. Nature 306:437-441
3. Aldrich RW, Stevens CF (1987) Voltage-dependent gating of single sodium channels from mammalian neuroblastoma cells. J Neurosci 7:418-431
4. Amir R, Liu C, Kocsis JD, Devor M (2002) Oscillatory mechanism in primary sensory neurons. Brain 125:421-435
5. Berman MF, Camardo JS, Robinson RB, Siegelbaum SA (1989) Single sodium channels from canine ventricular myocytes: voltage dependence and relative rates of activation and inactivation. J Physiol 415:503-531
6. Chen K, Aradi I, Thon N, Eghbal-Ahmadi M, Baram TZ, Soltesz I (2001) Persistently modified h-channels after complex febrile seizures convert the seizure-induced enhancement of inhibition to hyperexcitability. Nat Med 7:331-337
7. + channel slow inactivation via cAMP-dependent protein kinase and protein kinase C. Neuron 49:409-420
8. Colquhoun D, Sigworth FJ (1983) Fitting and statistical analysis of single-channel records. In: Sackmann B, Neher E (eds), Single-Channel Recording. New York: Plenum Press, pp 191-264
9. Cox DR, Lewis PAW (1966) The Statistical Analysis of Series of Events. Methuen, London
10. English BP, Min W, Oijen AM, Lee KT, Luo G, Sun H, Cherayil BJ, Kou SC, Xie S (2005) Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited. Nat Chem Biol 2:87-94
11. Goldin A (2003) Mechanisms of sodium channel inactivation. Curr Opin Neurobiol 13:284-290
12. Grant AO, Starmer CF, Strauss HC (1983) Unitary sodium currents in cardiac myocytes in rabbit. Circ Res 53:823-829
13. Hamill OP, Neher E, Sackman B, Sigworth FJ (1981) Improved patch-clamp techniques for high-resolution current recording from cells and cell-free membrane patches. Pfluegers Arch 391:85-100
14. Hille B (2001) Ionic Channels in Excitable Membranes, 3rd ed. Sunderland, MA: Sinauer Associates
15. Katsumata T, Muramatsu H, Nakamura H, Nishiyama Y, Aloki Y, Katayama Y (2003) Neuro-protective effect of NS 7, a novel Na and Ca channel blocker, in a focal ischemic model in the rat. Brain Res 969:168-174
16. Kirsch GE, Skattebol A, Possani LD, Brown AM (1989) Modification of Na channel gating by a scorpion toxin from Tityus serrulatus. J Gen Physiol 93:67-83
17. Kohling R (2002) Voltage-gated sodium channels in epilepsy. Epilepsia 43:1278-1295
18. Kunze DL, Lacarda AE, Wilson DL, Brown AM (1985) Cardiac sodium currents and the inactivating, reopening, and waiting properties of single cardiac Na channel. J Gen Physiol 86:691-719
19. Labarca P, Rice JA, Fredkin DA, Montal M (1985) Kinetic analysis of channel gating: application to the cholinergic receptor channel and the chloride channel from Torpedo californica. Biophys J 47:469-478
20. Lerch HP, Rigler R, Mikhailov AS (2005) Functional conformational motions in the turnover cycles of cholesterol oxidase. Proc Natl Acad Sci USA 102:10807-10812
21. Lian J, Shuai J, Durand DM (2004) Control of phase synchronization of neuronal activity in rat hippocampus. J Neuronal Eng 1:46-54
22. + channels by a G-protein-coupled pathway. Proc Natl Acad Sci USA 91:12351-12355
23. Majumdar S, Foster G, Sikdar SK (2004) Induction of pseudo-periodic oscillation in voltage-gated sodium channel properties is dependent on the duration of prolonged depolarization. Eur J Neurosci 20:127-143
24. Majumdar S, Sikdar SK (2005) Fast pseudo-periodic oscillations in the rat brain voltage-gated sodium channel α subunit. J Membr Biol 208:1-14
25. McCormick DA, Shu Y, Hasenstaub A, Sanchez-Vibes M, Badoual M, Bal T (2003) Persistent cortical activity: mechanisms of generation and effects on neuronal excitability. Cereb Cortex 13:1219-1231
26. McManus OB, Blatz AL, Magleby KL (1985) Inverse relationship of the durations of adjacent open and shut intervals for Cl and K channels. Nature 317:625-627
27. Mickus T, Jung H-Y, Spruston N (1999) Properties of slow, cumulative sodium channel inactivation in rat hippocampal CA1 pyramidal neurons. Biophys J 76:846-860
28. Miyamato K, Kanaori K, Nakagawa T, Kuroda Y (2001) Solution structures of the inactivation gate particle peptides of rat brain type IIA and human heart sodium channels in SDS micelles. J Peptide Res 57:193-203
29. Nuss HB, Balser JR, Orias DW, Lawrence JH, Tomaselli GF, Marban E (1996) Coupling between fast and slow inactivation revealed by analysis of a point mutation (F1304Q) in μ1 rat skeletal muscle sodium channels. J Physiol 494:411-429
30. O'Reilly JP, Wang SY, Wang GK (2001) Residue-specific effects on slow inactivation at V787 in D2-S6 of Nav1.4 sodium channels. Biophys J 81:2100-2111
31. Ong BH, Tomaselli GF, Balser JR (2000) A structural rearrangement in the sodium channel pore linked to slow inactivation and use dependence. J Gen Physiol 116:653-661
32. Patlak J, Horn R (1982) Effect of N-bromoacetamide on single sodium channel currents in excised membrane patches. J Gen Physiol 79:333-351
33. Rahamimoff R, Edry-Schiller J, Fraenkel MR, Butkevich A, Ginsburg S (1995) Oscillation in the activity of a potassium channel at the pre-synaptic nerve terminal. J Neurophysiol 73:2448-2458
34. Reyes A (2001) Influence of dendritic conductances on the input output properties of neurons. Annu Rev Neurosci 24:653-675
35. Rohl CA, Boeckman FA, Baker C, Scheuer T, Catterall WA, Klevit RE (1999) Solution structure of the sodium channel inactivation gate. Biochemistry 38:855-861
36. Rutecki PA, Yang Y (1998) Ictal epileptiform activity in the CA3 region of hippocampal slices produced by pilocarpine. J Neurophysiol 79:3019-3029
37. Sachs F, Neil J, Barkakati N (1982) Instruments and techniques: the automated analysis of data from single ionic channels. Pfluegers Arch Eur J Physiol 395:331-340
38. Sanhueza M, Bacigalupo J (2005) Intrinsic sub-threshold oscillations of the membrane potential in pyramidal neurons of the olfactory amygdala. Eur J Neurosci 22:1618-1626
39. Sarkar SN, Adhikari A, Sikdar SK (1995) Kinetic characterization of rat brain type IIA sodium channel alpha-subunit stably expressed in a somatic cell line. J Physiol 488:633-645
40. Segal MM (1994) Endogenous burst underlie seizure-like activity in solitary excitatory hippocampal neurons in micro cultures. J Neurophysiol 72:1874-1884
41. + channel currents observed in cultured rat muscle cells. Nature 287:447-449
42. 2+ channel causes a long-lasting modification of neuronal firing mode after status epilepticus. J Neurosci 22:3645-3655
43. Sunderman ER, Zagotta WN (1999) Mechanism of allosteric modulation of rod cyclic nucleotide-gated channels. J Gen Physiol 113:602-620
44. + channels. J Neurosci 18:1893-1903
45. Tsubokawa H, Offermanns S, Simon M, Kano M (2000) Calcium-dependent persistent facilitation of spike back-propagation in the CA1 area of pyramidal neurons. J Neurosci 20:4878-4884
46. Venkataramanan L, Kuk R, Sigworth FJ (1998) Identification of hidden Markov models for ion channel currents-part II: state dependent excess noise. IEEE Trans Signal Proc 46:1916-1929
47. Venkataramanan L, Kuk R, Sigworth FJ (2000) Identification of hidden Markov models for ion channel currents-part III: band limited, sampled data. IEEE Trans Signal Proc 48:376-385
48. Venkataramanan L, Sigworth FJ (2002) Applying hidden Markov models to the analysis of single ion channel activity. Biophys J 82:1930-1942
49. + channels. Biophys J 80:2221-2230
50. Vlad MO, Moran F, Schneider FW, Ross J (2002) Memory effects and oscillations in single-molecule kinetics. Proc Natl Acad Sci USA 99:12548-12555
51. + channel. J Gen Physiol 127:391-400
52. Waxman SG, Dib-Hajj S, Cummins TR, Black JA (1999) Sodium channels and pain. Proc Natl Acad Sci USA 96:7635-7639
53. Wu MF, Pang ZP, Zhuo M, Xu ZC (2005) Prolonged membrane potential depolarization in cingulated pyramidal cells after digit amputation in adult rats. Mol Pain 1:1-23
54. Xu ZC (1995) Neurophysiological changes of spiny neurons in rat neostriatum after transient forebrain ischemia: an in vivo intracellular recording and staining study. Neuroscience 67:823-836
55. Zheng J, Venkataramanan L, Sigworth FJ (2001) Hidden Markov model analysis of intermediate gating steps associated with the pore gate of Shaker potassium channels. J Gen Physiol 118:547-562