-
1
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
Wright, P. E., and Dyson, H. J. (1999) Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm, J. Mol. Biol. 293, 321-331.
-
(1999)
J. Mol. Biol
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
2
-
-
0035022941
-
Intrinsically disordered proteins
-
Dunker, A. K., Lawson, J. D., Brown, C. J., Williams, R. M., Romero, P., Oh, J. S., Oldfield, C. J., Campen, A. M., Ratliff, C. M., Hipps, K. W., Ausio, J., Nissen, M. S., Reeves, R., Kang, C. H., Kissinger, C. R., Bailey, R. W., Griswold, M. D., Chiu, W., Garber, E. C., and Obradovic, Z. (2001) Intrinsically disordered proteins, J. Mol. Graphics Modell. 19, 26-59.
-
(2001)
J. Mol. Graphics Modell
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
Ausio, J.11
Nissen, M.S.12
Reeves, R.13
Kang, C.H.14
Kissinger, C.R.15
Bailey, R.W.16
Griswold, M.D.17
Chiu, W.18
Garber, E.C.19
Obradovic, Z.20
more..
-
3
-
-
0036803243
-
Intrinsically unstructured proteins
-
Tompa, P. (2002) Intrinsically unstructured proteins, Trends Biochem. Sci. 27, 527-533.
-
(2002)
Trends Biochem. Sci
, vol.27
, pp. 527-533
-
-
Tompa, P.1
-
4
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson, H. J., and Wright, P. E. (2005) Intrinsically unstructured proteins and their functions, Nat. Rev. Mol. Cell. Biol. 6, 197-208.
-
(2005)
Nat. Rev. Mol. Cell. Biol
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
5
-
-
20444376186
-
The interplay between structure and function in intrinsically unstructured proteins
-
Tompa, P. (2005) The interplay between structure and function in intrinsically unstructured proteins, FEBS Lett. 579, 3346-3354.
-
(2005)
FEBS Lett
, vol.579
, pp. 3346-3354
-
-
Tompa, P.1
-
6
-
-
1542358787
-
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
-
Ward, J. J., Sodhi, J. S., McGuffin, L. J., Buxton, B. F., and Jones, D. T. (2004) Prediction and functional analysis of native disorder in proteins from the three kingdoms of life, J. Mol. Biol. 337, 635-645.
-
(2004)
J. Mol. Biol
, vol.337
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
7
-
-
0036408751
-
Intrinsic disorder in cell-signaling and cancer-associated proteins
-
Iakoucheva, L. M., Brown, C. J., Lawson, J. D., Obradovic, Z., and Dunker, A. K. (2002) Intrinsic disorder in cell-signaling and cancer-associated proteins, J. Mol. Biol. 323, 573-584.
-
(2002)
J. Mol. Biol
, vol.323
, pp. 573-584
-
-
Iakoucheva, L.M.1
Brown, C.J.2
Lawson, J.D.3
Obradovic, Z.4
Dunker, A.K.5
-
8
-
-
33748280715
-
Abundance of intrinsic disorder in protein associated with cardiovascular disease
-
Cheng, Y., LeGall, T., Oldfield, C. J., Dunker, A. K., and Uversky, V. N. (2006) Abundance of intrinsic disorder in protein associated with cardiovascular disease, Biochemistry 45, 10448-10460.
-
(2006)
Biochemistry
, vol.45
, pp. 10448-10460
-
-
Cheng, Y.1
LeGall, T.2
Oldfield, C.J.3
Dunker, A.K.4
Uversky, V.N.5
-
9
-
-
33744829805
-
Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation
-
Minezaki, Y., Homma, K., Kinjo, A. R., and Nishikawa, K. (2006) Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation, J. Mol. Biol. 359, 1137-1149.
-
(2006)
J. Mol. Biol
, vol.359
, pp. 1137-1149
-
-
Minezaki, Y.1
Homma, K.2
Kinjo, A.R.3
Nishikawa, K.4
-
10
-
-
33748272622
-
Rational drug design via intrinsically disordered protein
-
Cheng, Y., LeGall, T., Oldfield, C. J., Mueller, J. P., Van, Y.-Y., J., Romero, P., Cortese, M. S., Uversky, V. N., and Dunker, A. K. (2006) Rational drug design via intrinsically disordered protein, Trends Biotechnol. 24, 435-442.
-
(2006)
Trends Biotechnol
, vol.24
, pp. 435-442
-
-
Cheng, Y.1
LeGall, T.2
Oldfield, C.J.3
Mueller, J.P.4
Van, Y.-Y.J.5
Romero, P.6
Cortese, M.S.7
Uversky, V.N.8
Dunker, A.K.9
-
11
-
-
0034912536
-
Nuclear magnetic resonance methods for elucidation of structure and dynamics in disordered states
-
Dyson, H. J., and Wright, P. E. (2001) Nuclear magnetic resonance methods for elucidation of structure and dynamics in disordered states, Methods Enzymol. 339, 258-270.
-
(2001)
Methods Enzymol
, vol.339
, pp. 258-270
-
-
Dyson, H.J.1
Wright, P.E.2
-
12
-
-
16244419001
-
Elucidation of the protein folding landscape by NMR
-
Dyson, H. J., and Wright, P. E. (2005) Elucidation of the protein folding landscape by NMR, Methods Enzymol. 394, 299-321.
-
(2005)
Methods Enzymol
, vol.394
, pp. 299-321
-
-
Dyson, H.J.1
Wright, P.E.2
-
13
-
-
33846913510
-
Atomic-level characterization of disordered protein ensembles
-
Mittag, T., and Forman-Kay, J. D. (2007) Atomic-level characterization of disordered protein ensembles, Curr. Opin. Struct. Biol. 17, 3-14.
-
(2007)
Curr. Opin. Struct. Biol
, vol.17
, pp. 3-14
-
-
Mittag, T.1
Forman-Kay, J.D.2
-
14
-
-
33750097976
-
Proteomic studies of the intrinsically unstructured mammalian proteome
-
Galea, C. A., Pagala, V. R., Obenauer, J. C., Park, C. G., Slaughter, C. A., and Kriwacki, R. W. (2006) Proteomic studies of the intrinsically unstructured mammalian proteome, J. Proteome Res. 5, 2839-2848.
-
(2006)
J. Proteome Res
, vol.5
, pp. 2839-2848
-
-
Galea, C.A.1
Pagala, V.R.2
Obenauer, J.C.3
Park, C.G.4
Slaughter, C.A.5
Kriwacki, R.W.6
-
15
-
-
34247616119
-
Towards proteomic approaches for the identification of structural disorder
-
Csizmok, V., Dosztanyi, Z., Simon, I., and Tompa, P. (2007) Towards proteomic approaches for the identification of structural disorder, Curr. Protein Pept. Sci. 8, 173-179.
-
(2007)
Curr. Protein Pept. Sci
, vol.8
, pp. 173-179
-
-
Csizmok, V.1
Dosztanyi, Z.2
Simon, I.3
Tompa, P.4
-
16
-
-
0035906650
-
Calculation of ensembles of structures representing the unfolded state of an SH3 domain
-
Choy, W. Y., and Forman-Kay, J. D. (2001) Calculation of ensembles of structures representing the unfolded state of an SH3 domain, J. Mol. Biol. 308, 1011-1032.
-
(2001)
J. Mol. Biol
, vol.308
, pp. 1011-1032
-
-
Choy, W.Y.1
Forman-Kay, J.D.2
-
17
-
-
2142757231
-
Preformed structural elements feature in partner recognition by intrinsically unstructured proteins
-
Fuxreiter, M., Simon, I., Friedrich, P., and Tompa, P. (2004) Preformed structural elements feature in partner recognition by intrinsically unstructured proteins, J. Mol. Biol. 338, 1015-1026.
-
(2004)
J. Mol. Biol
, vol.338
, pp. 1015-1026
-
-
Fuxreiter, M.1
Simon, I.2
Friedrich, P.3
Tompa, P.4
-
18
-
-
33748456399
-
Analysis of molecular recognition features (MoRFs)
-
Mohan, A., Oldfield, C. J., Radivojac, P., Vacic, V., Cortese, M. S., Dunker, A. K., and Uversky, V. N. (2006) Analysis of molecular recognition features (MoRFs), J. Mol. Biol. 362, 1043-1059.
-
(2006)
J. Mol. Biol
, vol.362
, pp. 1043-1059
-
-
Mohan, A.1
Oldfield, C.J.2
Radivojac, P.3
Vacic, V.4
Cortese, M.S.5
Dunker, A.K.6
Uversky, V.N.7
-
19
-
-
23944514504
-
Structural disorder throws new light on moonlighting
-
Tompa, P., Szasz, C., and Buday, L. (2005) Structural disorder throws new light on moonlighting, Trends Biochem. Sci. 30, 484-489.
-
(2005)
Trends Biochem. Sci
, vol.30
, pp. 484-489
-
-
Tompa, P.1
Szasz, C.2
Buday, L.3
-
20
-
-
34249695447
-
Local structural disorder imparts plasticity on linear motifs
-
Fuxreiter, M., Tompa, P., and Simon, I. (2007) Local structural disorder imparts plasticity on linear motifs, Bioinformatics 23, 950-956.
-
(2007)
Bioinformatics
, vol.23
, pp. 950-956
-
-
Fuxreiter, M.1
Tompa, P.2
Simon, I.3
-
21
-
-
27144464910
-
Flexible nets: The roles of intrinsic disorder in protein interaction networks
-
Dunker, A. K., Cortese, M. S., Romero, P., Iakoucheva, L. M., and Uversky, V. N. (2005) Flexible nets: The roles of intrinsic disorder in protein interaction networks, FEBS J. 272, 5129-5148.
-
(2005)
FEBS J
, vol.272
, pp. 5129-5148
-
-
Dunker, A.K.1
Cortese, M.S.2
Romero, P.3
Iakoucheva, L.M.4
Uversky, V.N.5
-
22
-
-
0036147568
-
Multiple diverse ligands binding at a single protein site: A matter of pre-existing populations
-
Ma, B., Shatsky, M., Wolfson, H. J., and Nussinov, R. (2002) Multiple diverse ligands binding at a single protein site: A matter of pre-existing populations, Protein Sci. 11, 184-197.
-
(2002)
Protein Sci
, vol.11
, pp. 184-197
-
-
Ma, B.1
Shatsky, M.2
Wolfson, H.J.3
Nussinov, R.4
-
23
-
-
0035014892
-
NMR spin relaxation methods for characterization of disorder and folding in proteins
-
Bracken, C. (2001) NMR spin relaxation methods for characterization of disorder and folding in proteins, J. Mol. Graphics Modell. 19, 3-12.
-
(2001)
J. Mol. Graphics Modell
, vol.19
, pp. 3-12
-
-
Bracken, C.1
-
24
-
-
0035017534
-
NMR and SAXS characterization of the denatured state of the chemotactic protein cheY: Implications for protein folding initiation
-
Garcia, P., Serrano, L., Durand, D., Rico, M., and Bruix, M. (2001) NMR and SAXS characterization of the denatured state of the chemotactic protein cheY: Implications for protein folding initiation, Protein Sci. 10, 1100-1112.
-
(2001)
Protein Sci
, vol.10
, pp. 1100-1112
-
-
Garcia, P.1
Serrano, L.2
Durand, D.3
Rico, M.4
Bruix, M.5
-
25
-
-
4344707281
-
Unfolded proteins and protein folding studied by NMR
-
Dyson, H. J., and Wright, P. E. (2004) Unfolded proteins and protein folding studied by NMR, Chem. Rev. 104, 3607-3622.
-
(2004)
Chem. Rev
, vol.104
, pp. 3607-3622
-
-
Dyson, H.J.1
Wright, P.E.2
-
26
-
-
1842473094
-
p27 binds cyclin-cdk complexes through a sequential mechanism involving binding-induced protein folding
-
Lacy, E. R., Filippov, I., Lewis, W. S., Otieno, S., Xiao, L., Weiss, S., Hengst, L., and Kriwacki, R. W. (2004) p27 binds cyclin-cdk complexes through a sequential mechanism involving binding-induced protein folding, Nat. Struct. Mol. Biol. 11, 358-364.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 358-364
-
-
Lacy, E.R.1
Filippov, I.2
Lewis, W.S.3
Otieno, S.4
Xiao, L.5
Weiss, S.6
Hengst, L.7
Kriwacki, R.W.8
-
27
-
-
34250821717
-
Mechanism of coupled folding and binding of an intrinsically disordered protein
-
Sugase, K., Dyson, H. J., and Wright, P. E. (2007) Mechanism of coupled folding and binding of an intrinsically disordered protein, Nature 447, 1021-1025.
-
(2007)
Nature
, vol.447
, pp. 1021-1025
-
-
Sugase, K.1
Dyson, H.J.2
Wright, P.E.3
-
28
-
-
0000095902
-
Prothymosin a: Isolation and properties of the major immunoreactive form of thymosin α1 in rat thymus
-
Haritos, A. A., Goodall, G. J., and Horecker, B. L. (1984) Prothymosin a: Isolation and properties of the major immunoreactive form of thymosin α1 in rat thymus, Proc. Natl. Acad. Sci. U.S.A. 81, 1008-1011.
-
(1984)
Proc. Natl. Acad. Sci. U.S.A
, vol.81
, pp. 1008-1011
-
-
Haritos, A.A.1
Goodall, G.J.2
Horecker, B.L.3
-
29
-
-
0033783289
-
Fifteen years of prothymosin α: Contradictory past and new horizons
-
Pineiro, A., Cordero, O. J., and Nogueira, M. (2000) Fifteen years of prothymosin α: Contradictory past and new horizons, Peptides 21, 1433-1446.
-
(2000)
Peptides
, vol.21
, pp. 1433-1446
-
-
Pineiro, A.1
Cordero, O.J.2
Nogueira, M.3
-
31
-
-
33645468595
-
Surfing on prothymosin α proliferation and anti-apoptotic properties
-
Letsas, K. P., and Frangou-Lazaridis, M. (2006) Surfing on prothymosin α proliferation and anti-apoptotic properties, Neoplasma 53, 92-96.
-
(2006)
Neoplasma
, vol.53
, pp. 92-96
-
-
Letsas, K.P.1
Frangou-Lazaridis, M.2
-
32
-
-
0028276120
-
Prothymosin α binds to histone H1 in vitro
-
Papamarcaki, T., and Tsolas, O. (1994) Prothymosin α binds to histone H1 in vitro, FEBS Lett. 345, 71-75.
-
(1994)
FEBS Lett
, vol.345
, pp. 71-75
-
-
Papamarcaki, T.1
Tsolas, O.2
-
33
-
-
0032125596
-
Prothymosin α modulates the interaction of histone H1 with chromatin
-
Karetsou, Z., Sandaltzopoulos, R., Frangou-Lazaridis, M., Lai, C. Y., Tsolas, O., Becker, P. B., and Papamarcaki, T. (1998) Prothymosin α modulates the interaction of histone H1 with chromatin, Nucleic Acids Res. 26, 3111-3118.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3111-3118
-
-
Karetsou, Z.1
Sandaltzopoulos, R.2
Frangou-Lazaridis, M.3
Lai, C.Y.4
Tsolas, O.5
Becker, P.B.6
Papamarcaki, T.7
-
34
-
-
0036245548
-
Prothymosin α interacts with the CREB-binding protein and potentiates transcription,
-
3
-
Karetsou, Z., Kretsovali, A., Murphy, C., Tsolas, O., and Papamarcaki, T. (2002) Prothymosin α interacts with the CREB-binding protein and potentiates transcription, EMBO Rep. 3, 361-366.
-
(2002)
EMBO Rep
, pp. 361-366
-
-
Karetsou, Z.1
Kretsovali, A.2
Murphy, C.3
Tsolas, O.4
Papamarcaki, T.5
-
35
-
-
8844283395
-
Prothymosin α associates with the oncoprotein SET and is involved in chromatin decondensation
-
Karetsou, Z., Martic, G., Tavoulari, S., Christoforidis, S., Wilm, M., Gruss, C., and Papamarcaki, T. (2004) Prothymosin α associates with the oncoprotein SET and is involved in chromatin decondensation, FEBS Lett. 577, 496-500.
-
(2004)
FEBS Lett
, vol.577
, pp. 496-500
-
-
Karetsou, Z.1
Martic, G.2
Tavoulari, S.3
Christoforidis, S.4
Wilm, M.5
Gruss, C.6
Papamarcaki, T.7
-
36
-
-
19944430116
-
Nuclear oncoprotein prothymosin α is a partner of Keap1: Implications for expression of oxidative stress-protecting genes
-
Karapetian, R. N., Evstafieva, A. G., Abaeva, I. S., Chichkova, N. V., Filonov, G. S., Rubtsov, Y. P., Sukhacheva, E. A., Melnikov, S. V., Schneider, U., Wanker, E. E., and Vartapetian, A. B. (2005) Nuclear oncoprotein prothymosin α is a partner of Keap1: Implications for expression of oxidative stress-protecting genes, Mol. Cell. Biol. 25, 1089-1099.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 1089-1099
-
-
Karapetian, R.N.1
Evstafieva, A.G.2
Abaeva, I.S.3
Chichkova, N.V.4
Filonov, G.S.5
Rubtsov, Y.P.6
Sukhacheva, E.A.7
Melnikov, S.V.8
Schneider, U.9
Wanker, E.E.10
Vartapetian, A.B.11
-
37
-
-
0031577292
-
An Nrf2/small maf heterodimer mediates the induction of phase II detoxifying enzyme genes through antioxidant response elements
-
Itoh, K., Chiba, T., Takahashi, S., Ishii, T., Igarashi, K., Katoh, Y., Oyake, T., Hayashi, N., Satoh, K., Hatayama, I., Yamamoto, M., and Nabeshima, Y. (1997) An Nrf2/small maf heterodimer mediates the induction of phase II detoxifying enzyme genes through antioxidant response elements, Biochem. Biophys. Res. Commun. 236, 313-322.
-
(1997)
Biochem. Biophys. Res. Commun
, vol.236
, pp. 313-322
-
-
Itoh, K.1
Chiba, T.2
Takahashi, S.3
Ishii, T.4
Igarashi, K.5
Katoh, Y.6
Oyake, T.7
Hayashi, N.8
Satoh, K.9
Hatayama, I.10
Yamamoto, M.11
Nabeshima, Y.12
-
38
-
-
0037821802
-
Keap1-dependent proteasomal degradation of transcription factor Nrf2 contributes to the negative regulation of antioxidant response element-driven gene expression
-
McMahon, M., Itoh, K., Yamamoto, M., and Hayes, J. D. (2003) Keap1-dependent proteasomal degradation of transcription factor Nrf2 contributes to the negative regulation of antioxidant response element-driven gene expression, J. Biol. Chem. 278, 21592-21600.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 21592-21600
-
-
McMahon, M.1
Itoh, K.2
Yamamoto, M.3
Hayes, J.D.4
-
39
-
-
0033781027
-
The coordinate release of cytochrome c during apoptosis is rapid, complete and kinetically invariant
-
Goldstein, J. C., Waterhouse, N. J., Juin, P., Evan, G. I., and Green, D. R. (2000) The coordinate release of cytochrome c during apoptosis is rapid, complete and kinetically invariant, Nat. Cell Biol. 2, 156-162.
-
(2000)
Nat. Cell Biol
, vol.2
, pp. 156-162
-
-
Goldstein, J.C.1
Waterhouse, N.J.2
Juin, P.3
Evan, G.I.4
Green, D.R.5
-
40
-
-
0035890085
-
The expanding role of mitochondria in apoptosis
-
Wang, X. (2001) The expanding role of mitochondria in apoptosis, Genes Dev. 15, 2922-2933.
-
(2001)
Genes Dev
, vol.15
, pp. 2922-2933
-
-
Wang, X.1
-
41
-
-
0036187036
-
Three-dimensional structure of the apoptosome: Implications for assembly, procaspase-9 binding, and activation
-
Acehan, D., Jiang, X., Morgan, D. G., Heuser, J. E., Wang, X., and Akey, C. W. (2002) Three-dimensional structure of the apoptosome: Implications for assembly, procaspase-9 binding, and activation, Mol. Cell 9, 423-432.
-
(2002)
Mol. Cell
, vol.9
, pp. 423-432
-
-
Acehan, D.1
Jiang, X.2
Morgan, D.G.3
Heuser, J.E.4
Wang, X.5
Akey, C.W.6
-
42
-
-
0036899079
-
Apoptosomes: Engines for caspase activation
-
Adams, J. M., and Cory, S. (2002) Apoptosomes: Engines for caspase activation, Curr. Opin. Cell Biol. 14, 715-720.
-
(2002)
Curr. Opin. Cell Biol
, vol.14
, pp. 715-720
-
-
Adams, J.M.1
Cory, S.2
-
43
-
-
0034613302
-
Cytochrome c promotes caspase-9 activation by inducing nucleotide binding to Apaf-1
-
Jiang, X., and Wang, X. (2000) Cytochrome c promotes caspase-9 activation by inducing nucleotide binding to Apaf-1, J. Biol. Chem. 275, 31199-31203.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 31199-31203
-
-
Jiang, X.1
Wang, X.2
-
44
-
-
0036121272
-
Apoptosome: The cellular engine for the activation of caspase-9
-
Shi, Y. (2002) Apoptosome: The cellular engine for the activation of caspase-9, Structure 10, 285-288.
-
(2002)
Structure
, vol.10
, pp. 285-288
-
-
Shi, Y.1
-
45
-
-
0037428217
-
Distinctive roles of PHAP proteins and prothymosin-α in a death regulatory pathway
-
Jiang, X., Kim, H., Shu, H., Zhao, Y., Zhang, H., Kofron, J., Donnelly, J., Burns, D., Ng, S., Rosenberg, S., and Wang, X. (2003) Distinctive roles of PHAP proteins and prothymosin-α in a death regulatory pathway, Nature 299, 223-226.
-
(2003)
Nature
, vol.299
, pp. 223-226
-
-
Jiang, X.1
Kim, H.2
Shu, H.3
Zhao, Y.4
Zhang, H.5
Kofron, J.6
Donnelly, J.7
Burns, D.8
Ng, S.9
Rosenberg, S.10
Wang, X.11
-
46
-
-
0037422415
-
Cytochrome c is transformed from anti- to pro-oxidant when interacting with truncated oncoprotein prothymosin α
-
Markova, O. V., Evstafieva, A. G., Mansurova, S. E., Moussine, S. S., Palamarchuk, L. A., Pereverzev, M. O., Vartapetian, A. B., and Skulachev, V. P. (2003) Cytochrome c is transformed from anti- to pro-oxidant when interacting with truncated oncoprotein prothymosin α, Biochim. Biophys. Acta 1557, 109-117.
-
(2003)
Biochim. Biophys. Acta
, vol.1557
, pp. 109-117
-
-
Markova, O.V.1
Evstafieva, A.G.2
Mansurova, S.E.3
Moussine, S.S.4
Palamarchuk, L.A.5
Pereverzev, M.O.6
Vartapetian, A.B.7
Skulachev, V.P.8
-
47
-
-
0028785802
-
Prothymosin a: A biologically active protein with random coil conformation
-
Gast, K., Damaschun, H., Eckert, K., Schulze-Forster, K., Maurer, H. R., Muller-Frohne, M., Zirwer, D., Czarnecki, J., and Damaschun, G. (1995) Prothymosin a: A biologically active protein with random coil conformation, Biochemistry 34, 13211-13218.
-
(1995)
Biochemistry
, vol.34
, pp. 13211-13218
-
-
Gast, K.1
Damaschun, H.2
Eckert, K.3
Schulze-Forster, K.4
Maurer, H.R.5
Muller-Frohne, M.6
Zirwer, D.7
Czarnecki, J.8
Damaschun, G.9
-
48
-
-
0033539662
-
Natively unfolded human prothymosin α adopts partially folded collapsed conformation at acidic pH
-
Uversky, V. N., Gillespie, J. R., Millett, I. S., Khodyakova, A. V., Vasiliev, A. M., Chernovskaya, T. V., Vasilenko, R. N., Kozlovskaya, G. D., Dolgikh, D. A., Fink, A. L., Doniach, S., and Abramov, V. M. (1999) Natively unfolded human prothymosin α adopts partially folded collapsed conformation at acidic pH, Biochemistry 38, 15009-15016.
-
(1999)
Biochemistry
, vol.38
, pp. 15009-15016
-
-
Uversky, V.N.1
Gillespie, J.R.2
Millett, I.S.3
Khodyakova, A.V.4
Vasiliev, A.M.5
Chernovskaya, T.V.6
Vasilenko, R.N.7
Kozlovskaya, G.D.8
Dolgikh, D.A.9
Fink, A.L.10
Doniach, S.11
Abramov, V.M.12
-
49
-
-
0034669882
-
Why are "natively unfolded" proteins unstructured under physiologic conditions
-
Uversky, V. N., Gillespie, J. R., and Fink, A. L. (2000) Why are "natively unfolded" proteins unstructured under physiologic conditions, Proteins 41, 415-427.
-
(2000)
Proteins
, vol.41
, pp. 415-427
-
-
Uversky, V.N.1
Gillespie, J.R.2
Fink, A.L.3
-
50
-
-
0033856476
-
Divalent metal cation binding properties of human prothymosin α
-
Chichkova, N. V., Evstafieva, A. G., Lyakhov, I. G., Tsvetkov, A. S., Smirnova, T. A., Karapetian, R. N., Karger, E. M., and Vartapetian, A. B. (2000) Divalent metal cation binding properties of human prothymosin α, Eur. J. Biochem. 267, 4745-4752.
-
(2000)
Eur. J. Biochem
, vol.267
, pp. 4745-4752
-
-
Chichkova, N.V.1
Evstafieva, A.G.2
Lyakhov, I.G.3
Tsvetkov, A.S.4
Smirnova, T.A.5
Karapetian, R.N.6
Karger, E.M.7
Vartapetian, A.B.8
-
51
-
-
0029163272
-
Overproduction in Escherichia coli, purification and properties of human prothymosin α
-
Evstafieva, A. G., Chichkova, N. V., Makarova, T. N., Vartapetian, A. B., Vasilenko, A. V., Abramov, V. M., and Bogdanov, A. A. (1995) Overproduction in Escherichia coli, purification and properties of human prothymosin α, Eur. J. Biochem. 231, 639-643.
-
(1995)
Eur. J. Biochem
, vol.231
, pp. 639-643
-
-
Evstafieva, A.G.1
Chichkova, N.V.2
Makarova, T.N.3
Vartapetian, A.B.4
Vasilenko, A.V.5
Abramov, V.M.6
Bogdanov, A.A.7
-
52
-
-
36048953275
-
A new protocol for high-yield purification of recombinant human prothymosin α expressed in Escherichia coli for NMR studies
-
in press
-
Yi, S., Brickenden, A., and Choy, W. Y. (2007) A new protocol for high-yield purification of recombinant human prothymosin α expressed in Escherichia coli for NMR studies, Protein Expression Purif., in press.
-
(2007)
Protein Expression Purif
-
-
Yi, S.1
Brickenden, A.2
Choy, W.Y.3
-
53
-
-
0037465668
-
A novel strategy for the purification of recombinantly expressed unstructured protein domains
-
Kalthoff, C. (2003) A novel strategy for the purification of recombinantly expressed unstructured protein domains, J. Chromatogr., B 786, 247-254.
-
(2003)
J. Chromatogr., B
, vol.786
, pp. 247-254
-
-
Kalthoff, C.1
-
54
-
-
0029364052
-
15N chemical shift referencing in biomolecular NMR
-
15N chemical shift referencing in biomolecular NMR, J. Biomol. NMR 6, 135-140.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 135-140
-
-
Wishart, D.S.1
Bigam, C.G.2
Yao, J.3
Abilldgaard, F.4
Dyson, H.J.5
Markley, J.L.6
Sykes, B.D.7
-
55
-
-
0029400480
-
NMRPIPE: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPIPE: A multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR 6, 277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
56
-
-
4644259437
-
Using NMRView to visualize and analyze the NMR spectra of macromolecules
-
Johnson, B. A. (2004) Using NMRView to visualize and analyze the NMR spectra of macromolecules, Methods Mol. Biol. 278, 313-352.
-
(2004)
Methods Mol. Biol
, vol.278
, pp. 313-352
-
-
Johnson, B.A.1
-
57
-
-
0347722841
-
Heteronuclear multimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients
-
Sattler, M., Schleucher, J., and Griesinger, C. (1999) Heteronuclear multimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients, Prog. Nucl. Magn. Reson. Spectrosc. 34, 93-158.
-
(1999)
Prog. Nucl. Magn. Reson. Spectrosc
, vol.34
, pp. 93-158
-
-
Sattler, M.1
Schleucher, J.2
Griesinger, C.3
-
58
-
-
0028857598
-
Association of biomolecular systems via pulsed field gradient NMR self-diffusion measurements
-
Altieri, A. S., Hinton, D. P., and Byrd, R. A. (1995) Association of biomolecular systems via pulsed field gradient NMR self-diffusion measurements, J. Am. Chem. Soc. 117, 7566-7567.
-
(1995)
J. Am. Chem. Soc
, vol.117
, pp. 7566-7567
-
-
Altieri, A.S.1
Hinton, D.P.2
Byrd, R.A.3
-
59
-
-
0033554852
-
Hydrodynamic radii of native and denatured proteins measured by pulse field gradient NMR techniques
-
Wilkins, D. K., Grimshaw, S. B., Receveur, V., Dobson, C. M., Jones, J. A., and Smith, L. J. (1999) Hydrodynamic radii of native and denatured proteins measured by pulse field gradient NMR techniques, Biochemistry 38, 16424-16431.
-
(1999)
Biochemistry
, vol.38
, pp. 16424-16431
-
-
Wilkins, D.K.1
Grimshaw, S.B.2
Receveur, V.3
Dobson, C.M.4
Jones, J.A.5
Smith, L.J.6
-
60
-
-
0001144784
-
1 constant relaxation time NMRspectroscopy
-
1 constant relaxation time NMRspectroscopy, J. Am. Chem. Soc. 118, 911-912.
-
(1996)
J. Am. Chem. Soc
, vol.118
, pp. 911-912
-
-
Akke, M.1
Palmer, A.G.2
-
61
-
-
0028282555
-
15N NMR relaxation
-
15N NMR relaxation, Biochemistry 33, 5984-6003.
-
(1994)
Biochemistry
, vol.33
, pp. 5984-6003
-
-
Farrow, N.A.1
Muhandiram, R.2
Singer, A.U.3
Pascal, S.M.4
Kay, C.M.5
Gish, G.6
Shoelson, S.E.7
Pawson, T.8
Forman-Kay, J.D.9
Kay, L.E.10
-
62
-
-
0028472289
-
Direct measurements of the dissociation-rate constant for inhibitor-enzyme complexes via the T1 rho and T2 (CPMG) methods
-
Davis, D. G., Perlman, M. E., and London, R. E. (1994) Direct measurements of the dissociation-rate constant for inhibitor-enzyme complexes via the T1 rho and T2 (CPMG) methods, J. Magn. Reson., Ser. B 104, 266-275.
-
(1994)
J. Magn. Reson., Ser. B
, vol.104
, pp. 266-275
-
-
Davis, D.G.1
Perlman, M.E.2
London, R.E.3
-
64
-
-
0032148390
-
A microfabricated dialysis device for sample cleanup in electrospray ionization mass spectrometry
-
Xu, N., Lin, Y., Hofstadler, S. A., Matson, D., Call, C. J., and Smith, R. D. (1998) A microfabricated dialysis device for sample cleanup in electrospray ionization mass spectrometry, Anal. Chem. 70, 3553-3556.
-
(1998)
Anal. Chem
, vol.70
, pp. 3553-3556
-
-
Xu, N.1
Lin, Y.2
Hofstadler, S.A.3
Matson, D.4
Call, C.J.5
Smith, R.D.6
-
65
-
-
0036034098
-
On-line microdialysis for enhanced resolution and sensitivity during electrospray mass spectrometry of non-covalent complexes and competitive binding studies
-
Benkestock, K., Edlund, P. O., and Roeraade, J. (2002) On-line microdialysis for enhanced resolution and sensitivity during electrospray mass spectrometry of non-covalent complexes and competitive binding studies, Rapid Commun. Mass Spectrom. 16, 2054-2059.
-
(2002)
Rapid Commun. Mass Spectrom
, vol.16
, pp. 2054-2059
-
-
Benkestock, K.1
Edlund, P.O.2
Roeraade, J.3
-
66
-
-
0347610773
-
13C nulcear magnetic resonance chemical shifts
-
13C nulcear magnetic resonance chemical shifts, J. Am. Chem. Soc. 113, 5490-5492.
-
(1991)
J. Am. Chem. Soc
, vol.113
, pp. 5490-5492
-
-
Spera, S.1
Bax, A.2
-
67
-
-
23144462958
-
Linear analysis of carbon-13 chemical shift differences and its application to the detection and correction of errors in referencing and spin system identifications
-
Wang, L., Eghbalnia, H. R., Bahrami, A., and Markley, J. L. (2005) Linear analysis of carbon-13 chemical shift differences and its application to the detection and correction of errors in referencing and spin system identifications, J. Biomol. NMR 32, 13-22.
-
(2005)
J. Biomol. NMR
, vol.32
, pp. 13-22
-
-
Wang, L.1
Eghbalnia, H.R.2
Bahrami, A.3
Markley, J.L.4
-
69
-
-
0034727681
-
Methanol-induced conformations of myoglobin at pH 4.0
-
Babu, K. R., and Douglas, D. J. (2000) Methanol-induced conformations of myoglobin at pH 4.0, Biochemistry 39, 14702-14710.
-
(2000)
Biochemistry
, vol.39
, pp. 14702-14710
-
-
Babu, K.R.1
Douglas, D.J.2
-
70
-
-
33745785022
-
Comparison of bovine and porcine β-lactoglobulin: A mass spectrometric analysis
-
Invernizzi, G., Samalikova, M., Brocca, S., Lotti, M., Molinari, H., and Grandori, R. (2006) Comparison of bovine and porcine β-lactoglobulin: A mass spectrometric analysis, J. Mass Spectrom. 41, 717-727.
-
(2006)
J. Mass Spectrom
, vol.41
, pp. 717-727
-
-
Invernizzi, G.1
Samalikova, M.2
Brocca, S.3
Lotti, M.4
Molinari, H.5
Grandori, R.6
-
71
-
-
0030027168
-
Analysis of the absorption spectrum of photosystem II reaction centers: Temperature dependence, pigment assignment, and inhomogeneous broadening
-
Konermann, L., and Holzwarth, A. R. (1996) Analysis of the absorption spectrum of photosystem II reaction centers: Temperature dependence, pigment assignment, and inhomogeneous broadening, Biochemistry 35, 829-842.
-
(1996)
Biochemistry
, vol.35
, pp. 829-842
-
-
Konermann, L.1
Holzwarth, A.R.2
-
72
-
-
0028390789
-
Conformation or cytochrome c studied by deuterium exchange-electrospray ionization mass spectrometry
-
Wagner, D. S., and Anderegg, R. J. (1994) Conformation or cytochrome c studied by deuterium exchange-electrospray ionization mass spectrometry, Anal. Chem. 66, 706-711.
-
(1994)
Anal. Chem
, vol.66
, pp. 706-711
-
-
Wagner, D.S.1
Anderegg, R.J.2
-
73
-
-
36049023019
-
Mass Spectrometry
-
John Wiley and Sons Inc, Hoboken, NJ
-
Kaltashov, I. A., and Eyles, S. J. (2005) Mass Spectrometry, in Biophysics, John Wiley and Sons Inc., Hoboken, NJ.
-
(2005)
Biophysics
-
-
Kaltashov, I.A.1
Eyles, S.J.2
-
74
-
-
34347332295
-
A minimalist model for exploring conformational effects on the electrospray charge state distribution of proteins
-
Konermann, L. (2007) A minimalist model for exploring conformational effects on the electrospray charge state distribution of proteins, J. Phys. Chem. B 111, 6534-6543.
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 6534-6543
-
-
Konermann, L.1
-
75
-
-
34250748490
-
Analysis of protein mixtures by electrospray mass spectrometry: Effects of conformation and desolvation behavior on the signal intensities of hemoglobin subunits
-
Kuprowski, M. C., Boys, B. L., and Konermann, L. (2007) Analysis of protein mixtures by electrospray mass spectrometry: Effects of conformation and desolvation behavior on the signal intensities of hemoglobin subunits, J. Am. Soc. Mass Spectrom. 18, 1279-1285.
-
(2007)
J. Am. Soc. Mass Spectrom
, vol.18
, pp. 1279-1285
-
-
Kuprowski, M.C.1
Boys, B.L.2
Konermann, L.3
-
76
-
-
33947377924
-
Signal response of co-existing protein conformers in electrospray mass spectrometry
-
Kuprowski, M. C., and Konermann, L. (2007) Signal response of co-existing protein conformers in electrospray mass spectrometry, Anal. Chem. 79, 2499-2506.
-
(2007)
Anal. Chem
, vol.79
, pp. 2499-2506
-
-
Kuprowski, M.C.1
Konermann, L.2
-
77
-
-
0028559743
-
Calcium stoichiometry determination for calcium binding proteins by electrospray ionization mass spectrometry
-
Hu, P. F., Ye, Q. Z., and Loo, J. A. (1994) Calcium stoichiometry determination for calcium binding proteins by electrospray ionization mass spectrometry, Anal. Chem. 66, 4190-4194.
-
(1994)
Anal. Chem
, vol.66
, pp. 4190-4194
-
-
Hu, P.F.1
Ye, Q.Z.2
Loo, J.A.3
-
78
-
-
3242671533
-
Buffer loading for counteracting metal salt-induced signal suppression in electrospray ionization
-
Iavarone, A. T., Udekwu, O. A., and Williams, E. R. (2004) Buffer loading for counteracting metal salt-induced signal suppression in electrospray ionization, Anal. Chem. 76, 3944-3950.
-
(2004)
Anal. Chem
, vol.76
, pp. 3944-3950
-
-
Iavarone, A.T.1
Udekwu, O.A.2
Williams, E.R.3
-
79
-
-
0014592230
-
Computed circular dichroism spectra for the evaluation of protein conformation
-
Greenfield, N., and Fasman, G. D. (1969) Computed circular dichroism spectra for the evaluation of protein conformation, Biochemistry 8, 4108-4116.
-
(1969)
Biochemistry
, vol.8
, pp. 4108-4116
-
-
Greenfield, N.1
Fasman, G.D.2
-
80
-
-
0031853060
-
Protein dynamics from NMR
-
Kay, L. E. (1998) Protein dynamics from NMR, Nat. Struct. Biol. NMR 513-517.
-
(1998)
Nat. Struct. Biol. NMR
, pp. 513-517
-
-
Kay, L.E.1
-
82
-
-
0033577288
-
A relaxation- compensated Carr-Purcell-Meiboom-Gill sequence for character-izing chemical exchange by NMR spectroscopy
-
Loria, J. P., Ranee, M., and Palmer, A. G. (1999) A relaxation- compensated Carr-Purcell-Meiboom-Gill sequence for character-izing chemical exchange by NMR spectroscopy, J. Am. Chem. Soc. 121, 2331-2332.
-
(1999)
J. Am. Chem. Soc
, vol.121
, pp. 2331-2332
-
-
Loria, J.P.1
Ranee, M.2
Palmer, A.G.3
-
83
-
-
0027988297
-
Backbone dynamics of a highly disordered 131 residue fragment of staphylococcal nuclease
-
Alexandrescu, A. T., and Shortle, D. (1994) Backbone dynamics of a highly disordered 131 residue fragment of staphylococcal nuclease, J. Mol. Biol. 242, 527-546.
-
(1994)
J. Mol. Biol
, vol.242
, pp. 527-546
-
-
Alexandrescu, A.T.1
Shortle, D.2
-
84
-
-
0026784152
-
Mapping of the spectral densities of N-H bond motions in Eglin c using heteronuclear relaxation experiments
-
Peng, J. W., and Wagner, G. (1992) Mapping of the spectral densities of N-H bond motions in Eglin c using heteronuclear relaxation experiments, Biochemistry 31, 8571-8576.
-
(1992)
Biochemistry
, vol.31
, pp. 8571-8576
-
-
Peng, J.W.1
Wagner, G.2
-
85
-
-
0034684969
-
2+-mediated structure formation and compaction of the "natively unfolded" human prothymosin α
-
2+-mediated structure formation and compaction of the "natively unfolded" human prothymosin α, Biochem. Biophys. Res. Commun. 267, 663-668.
-
(2000)
Biochem. Biophys. Res. Commun
, vol.267
, pp. 663-668
-
-
Uversky, V.N.1
Gillespie, J.R.2
Millett, I.S.3
Khodyakova, A.V.4
Vasilenko, R.N.5
Vasiliev, A.M.6
Rodionov, I.L.7
Kozlovskaya, G.D.8
Dolgikh, D.A.9
Fink, A.L.10
Doniach, S.11
Permyakov, E.A.12
Abramov, V.M.13
-
86
-
-
0036468397
-
Coupling of folding and binding for unstructured proteins
-
Dyson, H. J., and Wright, P. E. (2002) Coupling of folding and binding for unstructured proteins, Curr. Opin. Struct. Biol. 12, 54-60.
-
(2002)
Curr. Opin. Struct. Biol
, vol.12
, pp. 54-60
-
-
Dyson, H.J.1
Wright, P.E.2
-
87
-
-
33344463325
-
Keapl recruits Neh2 through binding to ETGE and DLG motifs: Characterization of the two-site molecular recognition model
-
Tong, K. I., Katoh, Y., Kusunoki, H., Itoh, K., Tanaka, T., and Yamamoto, M. (2006) Keapl recruits Neh2 through binding to ETGE and DLG motifs: Characterization of the two-site molecular recognition model, Mol. Cell. Biol. 26, 2887-2900.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 2887-2900
-
-
Tong, K.I.1
Katoh, Y.2
Kusunoki, H.3
Itoh, K.4
Tanaka, T.5
Yamamoto, M.6
-
88
-
-
34249941302
-
Copper and the prion protein: Methods, structures, function, and disease
-
Millhauser, G. L. (2007) Copper and the prion protein: Methods, structures, function, and disease, Annu. Rev. Phys. Chem. 58, 299-320.
-
(2007)
Annu. Rev. Phys. Chem
, vol.58
, pp. 299-320
-
-
Millhauser, G.L.1
-
89
-
-
0035941201
-
Metal-triggered structural transformations, aggregation, and fibrillation of human α-synuclein. A possible molecular link between parkinson's disease and heavy metal exposure
-
Uversky, V. N., Li, J., and Fink, A. L. (2001) Metal-triggered structural transformations, aggregation, and fibrillation of human α-synuclein. A possible molecular link between parkinson's disease and heavy metal exposure, J. Biol. Chem. 276, 44284-44296.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 44284-44296
-
-
Uversky, V.N.1
Li, J.2
Fink, A.L.3
-
90
-
-
0030478950
-
Zinc folds the N-terminal domain of HIV-1 integrase, promotes multimerization, and enhances catalytic activity
-
Zheng, R., Jenkins, T. M., and Craigie, R. (1996) Zinc folds the N-terminal domain of HIV-1 integrase, promotes multimerization, and enhances catalytic activity, Proc. Natl. Acad. Sci. U.S.A. 93, 13659-13664.
-
(1996)
Proc. Natl. Acad. Sci. U.S.A
, vol.93
, pp. 13659-13664
-
-
Zheng, R.1
Jenkins, T.M.2
Craigie, R.3
|