Molecular genetic diversification of the lizard complex Darevskia raddei (Sauria: Lacertidae): Early stages of speciation

Molecular Biology

Volumn 41, Issue 5, 2007, Pages 764-775

  Grechko, V V ^a   Bannikova, A A ^b   Kosushkin, S A ^a   Ryabinina, N L ^a   Milto, K D ^c   Darevsky, I S ^c   Kramerov, D A ^a  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

^b MOSCOW STATE UNIVERSITY   (Russian Federation)

^c ZOOLOGICAL INSTITUTE   (Russian Federation)

Author keywords

DNA markers; Inter SINE spacers; Molecular evolution; Reptiles; Speciation

Indexed keywords

DAREVSKIA; DAREVSKIA RADDEI; DAREVSKIA RUDIS; LACERTIDAE; REPTILIA; SAURIA; SQUAMATA;

EID: 35349018595     PISSN: 00268933     EISSN: 16083245     Source Type: Journal    
DOI: 10.1134/S0026893307050093     Document Type: Article

References (34)

1. Molecular Systematics. 1996. Eds. Hillis D.M., Moritz C., Mable B.K. Sunderland, MA: Sinauer Assoc.
2. Grechko V.V. 2002. Using milanular DNA markars in phylogeny and systematics. Russ. J. Genet. 38, 1013-1033.
3. Bannikova A.A. 2004. Molecular phylogeny and modern systematics of mammals. Zh. Obshch. Biol. 65, 278-305.
4. Hillis D.M. 1987. Molecular versus morphological approaches in evolution. Annu. Rev. Ecol. Syst. 18, 23-42.
5. Darevsky I.S. 1967. Skal'nye yasheritsy Kavkasa (Caucasian Rock Lizards). Leningrad: Nauka.
6. Grechko V.V., Fedorova L.V., Fedorov A.N., et al. 1997. Restriction endonuclease analysis of highly repetitive DNA as a phylogenetic tool. J. Mol. Evol. 45, 332-336.
7. Fedorov A.N., Fedorova L.V., Grechko V.V., et al. 1999. Variable and invariable DNA repeat characters revealed by taxonprint approach are useful for molecular systematics. J. Mol. Evol. 48, 69-76.
8. Ryabinina N.L., Grechko V.V., Darevsky I.S. 1998. Polymorphism of RAPD markers in lizard populations of the family Lacertidae. Russ. J. Genet. 34, 1415-1420.
9. Grechko V.V., Ryabinin D.M., Fedorov A.N., et al. 1998. DNA taxonprints of some Lacertidae lizards: taxonomic and phylogenetic implications. Mol. Biol. 32, 151-160.
10. Gobanu D.G., Grechko V.V., Darevsky I.S. 2003. Molecular evolution of satellite DNA CL sat in lizards from the genus Darevskia (Sauria: Lacertidae): correlation with species diversity. Russ. J. Genet. 39, 1292-1305).
11. Ryabinina N.L., Bannikova A.A., Kosushkin S.A., et al. 2002. Estimation of the subspecies level of differentiation in Caucasian lizards of the genus Darevskia (syn. Lacerta saxicola complex, Lacertidae, Sauria) using genome DNA markers. Russ. J. Herpetol. 9, 185-194.
12. Grecko V.V., Fedorov L.V., Ryabinin D.M., et al. 2006. The use of nuclear DNA molecular markers for studying speciation and systematics as exemplified by the "Lacerta agilis complex" (Sauria: Lacertidae). Mol. Biol. 40, 51-62.
13. Buntjer J.B. 1997. DNA Repeats in the Vertebrate Genome As Probes in Phylogeny and Species Identification. Utrecht, Netherlands: Utrecht Univ. Press.
14. Bannikova A.A., Matveev V.A., Kramerov D.A. 2002. Experience in using inter-SINA-PCR in studies of mammalian phylogeny. Genetika (Moscow). 38, 853-864.
15. Gilbert W., Labuda D. 2000. Evolutionary inventions and continuity of CORE-SINE in mammals. J. Mol. Biol. 298, 365-377.
16. Kramerov D.A., Vassetzky N.S. 2005. Short retroposons in eukaryotic genome. Int. Rev. Cytol. 247, 165-221.
17. Saitou N., Nei M. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
18. Swofford D.L. 1998. PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sunderland, MA: Sinauer Assoc. [software].
19. Kruskal J.B. 1986. Multidimensional scaling and other methods for discovering structure. In: Statistical Methods for Digital Computers, Eds. Einslein K, Ralston A., Wilf H.S. New York: Wiley. Translated under the title Statisticheskie metody dlya EVM, Moscow: Mir, pp. 301-347.
20. Nei M., Li W.-H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA. 76, 5269-5273.
21. van de Peer Y., de Wachter R. 1994. TREECON: A software package for the construction and drawing of evolutionary trees. Cabios. 9, 177-182.
22. Fu J., Murphy R.W., Darevsky I.S. 2000. Divergence of the cytochrome b gene in the Lacerta raddei complex and in parthenogenetic daughter species: Evidence for recent multiple origins. Copeia. 2, 432-440.
23. Brower A.V.Z., DeSalle R., Vogler A. 1996. Gene tree, species tree, and systematics. Annu. Rev. Ecol. Syst. 27, 423-450.
24. Avise J. C. 2004. Molecular Markers, Natural History, and Evolution. 2nd ed., Sutherland, MA: Sinauer Assoc.
25. Arnold M.L. 1997. Natural Hybridization and Evolution. N.Y.: Oxford Univ. Press.
26. Baker R.J., Bradley R.D. 2006. Speciation in mammals and genetic species concept. J. Mammal. 87, 643-662.
27. Shubina E.A., Ponomareva E.V., Gritsenko O.F. 2006. Population-genetic structure of chars in the northern Kuriles and the position of Dolly Varden char in the system of genus Salvalinus (Salminidaa: Oalaistai). Zh. Obshch. Biol. 67, 280-297.
28. Fu J. 2000. Toward the phylogeny of the family Lacertidae: Why 4798 base pairs of mtDNA sequences cannot draw the picture. Biol. J. Linn. Soc. 71, 203-217.
29. Hewitt G.M. 2004. Genetic consequence of climatic oscillations in the Quaternary. Phil. Trans. Roy. Soc. London. Ser. B, Biol. Sci. 359, 183-185.
30. Ciobanu D.G., Grechko V.V., Darevsky I.S., Kramerov D.A. 2004. New satellite DNA in Lacerta s. str. lizards (Sauria: Lacertidae): Evolutionary pathways and phylogenetic impact. J. Exp. Zool. 302B, 505-516.
31. Grechko V.V., Ciobanu D.G., Darevsky I.S., et al. 2006. Molecular evolution of satellite DNA repeats and speciation of lizards of the genus Darevskia (Sauria: Lacertidae). Genome. 49, 1297-1307.
32. Böhme W., Bischoff W. 1984. Lacerta rudis Bedriaga, 1886 (Kielschwanz-Feldseidechse). In: Handbuch der Reptilien und Amphibien Europas. Echsen-2 (Lacerta). Ed. Böhme W. Wisbaden: Aula-Verlag, vol. 2/1, pp. 332-344.
33. Kalyabina S.F., Milto K.D., Ananyeva N.B., et al. 2001. Phylogeography and systematics of Lacerta agilis based on mitochondrial cytochrome b gene sequences: First results. Russ. J. Herpetol. 8, 149-158.
34. Arribas O.J. 1999. Phylogeny and relationships of the mountain lizards of Europe and Near East (Archaeolacerta Mertens, 1921, sensu lato) and their relationships among the Eurasian lacertid radiation. Russ. J. Herpetol. 16, 1-22.