Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: Application to the proteomics study of membrane proteins from primary human endothelial cells

Molecular and Cellular Proteomics

Volumn 6, Issue 9, 2007, Pages 1621-1637

  Bouyssié, David ^a   Gonzalez de Peredo, Anne ^a,b   Mouton, Emmanuelle ^a   Albigot, Renaud ^a   Roussel, Lucie ^b   Ortega, Nathalie ^b   Cayrol, Corinne ^b   Burlet Schiltz, Odie ^a   Girard, Jean Philippe ^a   Monsarrat, Bernard ^a  

^a Laboratoire de Protéomique et Spectrométrie de Masse des Biomolécules   (France)

^b INSTITUT DE PHARMACOLOGIE ET DE BIOLOGIE STRUCTURALE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

2',5' OLIGOADENYLATE SYNTHETASE; ENOYL COENZYME A HYDRATASE; FERRITIN; GAMMA INTERFERON; GUANINE NUCLEOTIDE BINDING PROTEIN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN F; HLA ANTIGEN CLASS 1; INTERCELLULAR ADHESION MOLECULE 1; ISOCITRATE DEHYDROGENASE (NADP); L SELECTIN; LOW DENSITY LIPOPROTEIN RECEPTOR; LYMPHOTOXIN; LYMPHOTOXIN BETA; LYSOSOME ASSOCIATED MEMBRANE PROTEIN 2; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 1; MEMBRANE PROTEIN; NICOTINAMIDE METHYLTRANSFERASE; PHOSPHOLIPID SCRAMBLASE 1; PYRUVATE DEHYDROGENASE COMPLEX; PYRUVATE DEHYDROGENASE COMPLEX E2; RHO GUANINE NUCLEOTIDE BINDING PROTEIN; SCRAMBLASE; THROMBOSPONDIN 1; TRYPTOPHAN TRANSFER RNA LIGASE; TUMOR NECROSIS FACTOR ALPHA; TUMOR NECROSIS FACTOR RECEPTOR; TUMOR NECROSIS FACTOR RECEPTOR 5; UNCLASSIFIED DRUG; VASCULAR CELL ADHESION MOLECULE 1;

ARTICLE; CALCULATION; CELLULAR DISTRIBUTION; CLUSTER ANALYSIS; COMPUTER INTERFACE; COMPUTER PROGRAM; ENDOTHELIUM CELL; INFLAMMATION; INFORMATION RETRIEVAL; ISOTOPE LABELING; MASS SPECTROMETRY; MICROSOME; NANOANALYSIS; NUCLEOTIDE SEQUENCE; PARSIMONY ANALYSIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEIN LOCALIZATION; PROTEOMICS; QUANTITATIVE ANALYSIS; SCORING SYSTEM; VALIDATION STUDY;

CELL MEMBRANE; CHROMATOGRAPHY, LIQUID; COMPUTATIONAL BIOLOGY; CYTOKINES; ENDOTHELIAL CELLS; ENDOTHELIUM, VASCULAR; HUMANS; INFLAMMATION; INTERNET; MASS SPECTROMETRY; MICROSOMES; PEPTIDES; PROTEOMICS; SOFTWARE; UMBILICAL VEINS;

EID: 34848925460     PISSN: 15359476     EISSN: None     Source Type: Journal    
DOI: 10.1074/mcp.T600069-MCP200     Document Type: Article

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