Mass spectrometric-based approaches in quantitative proteomics

Methods

Volumn 29, Issue 2, 2003, Pages 124-130

  Ong, Shao En ^a   Foster, Leonard J ^a   Mann, Matthias ^a  

^a UNIVERSITY OF SOUTHERN DENMARK   (Denmark)

Author keywords

Amino acid labeling; Isotope labeling; Isotope coded affinity tag; Quantitation; Quantitative proteomics; SILAC; Stable isotope

Indexed keywords

ARTICLE; BIOAVAILABILITY; CELL CULTURE; CONTROLLED STUDY; DATA ANALYSIS; ISOTOPE LABELING; MASS SPECTROMETRY; METHODOLOGY; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEOMICS; QUANTITATIVE ASSAY;

AMINO ACIDS; ANIMALS; CELL CULTURE TECHNIQUES; CHEMICAL FRACTIONATION; HUMANS; ISOTOPE LABELING; ISOTOPES; MASS SPECTROMETRY; PROTEOMICS; SENSITIVITY AND SPECIFICITY;

EID: 0037326081     PISSN: 10462023     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1046-2023(02)00303-1     Document Type: Article

References (19)

1. Lahm H.W., Langen H. Electrophoresis. 21:2000;2105-2114.
2. Oda Y., Huang K., Cross F.R., Cowburn D., Chait B.T. Proc. Natl. Acad. Sci. USA. 96:1999;6591-6596.
3. Gygi S.P., Rist B., Gerber S.A., Turecek F., Gelb M.H., Aebersold R. Nat. Biotechnol. 17:1999;994-999.
4. Goshe M.B., Conrads T.P., Panisko E.A., Angell N.H., Veenstra T.D., Smith R.D. Anal. Chem. 73:2001;2578-2586.
5. Schnolzer M., Jedrzejewski P., Lehmann W.D. Electrophoresis. 17:1996;945-953.
6. Shevchenko A., Chernushevich I., Ens W., Standing K.G., Thomson B., Wilm M., Mann M. Rapid Commun. Mass Spectrom. 11:1997;1015-1024.
7. Mirgorodskaya O.A., Kozmin Y.P., Titov M.I., Korner R., Sonksen C.P., Roepstorff P. Rapid Commun. Mass Spectrom. 14:2000;1226-1232.
8. Yao X., Freas A., Ramirez J., Demirev P.A., Fenselau C. Anal. Chem. 73:2001;2836-2842.
9. Ong S.E., Blagoev B., Kratchmarova I., Kristensen D.B., Steen H., Pandey A., Mann M. Mol. Cell Proteomics. 1:2002;376-386.
10. Washburn M.P., Ulaszek R., Deciu C., Schieltz D.M., Yates J.R. III Anal. Chem. 74:2002;1650-1657.
11. Zhang R., Sioma C.S., Wang S., Regnier F.E. Anal. Chem. 73:2001;5142-5149.
12. M. Mann, S.E. Ong, J. Rappsilber, Y. Ishihama, J.S. Andersen, in: 50th ASMS Conference on Mass Spectrometry and Allied Topics, 2002.
13. Chakraborty A., Regnier F.E. J. Chromatogr. A. 949:2002;173-184.
14. Regnier F.E., Riggs L., Zhang R., Xiong L., Liu P., Chakraborty A., Seeley E., Sioma C., Thompson R.A. J. Mass Spectrom. 37:2002;133-145.
15. Goodlett D.R., Keller A., Watts J.D., Newitt R., Yi E.C., Purvine S., Eng J.K., von Haller P., Aebersold R., Kolker E. Rapid Commun. Mass Spectrom. 15:2001;1214-1221.
16. Zhou H., Ranish J.A., Watts J.D., Aebersold R. Nat. Biotechnol. 20:2002;512-515.
17. Stemmann O., Zou H., Gerber S.A., Gygi S.P., Kirschner M.W. Cell. 107:2001;715-726.
18. R. Aebersold, in: 50th ASMS Conference on Mass Spectrometry and Allied Topics, 2002.
19. Conrads T.P., Alving K., Veenstra T.D., Belov M.E., Anderson G.A., Anderson D.J., Lipton M.S., Pasa-Tolic L., Udseth H.R., Chrisler W.B., Thrall B.D., Smith R.D. Anal. Chem. 73:2001;2132-2139.