-
1
-
-
34748825685
-
-
PowerPC Microprocessor Family: Vector/SIMD Multimedia Extension Technology Programming Environments Manual, http://www-306.ibm.com/chips/ techlib.
-
PowerPC Microprocessor Family: Vector/SIMD Multimedia Extension Technology Programming Environments Manual, http://www-306.ibm.com/chips/ techlib.
-
-
-
-
2
-
-
0035158540
-
Industrial Applications of High-Performance Computing for Phylogeny Reconstruction
-
D.A. Bader, B.M.E. Motet, and L. Vawter. Industrial Applications of High-Performance Computing for Phylogeny Reconstruction. In Proc. of SPIEIT Com, volume 4528, pages 159-168, 2001.
-
(2001)
Proc. of SPIEIT Com
, vol.4528
, pp. 159-168
-
-
Bader, D.A.1
Motet, B.M.E.2
Vawter, L.3
-
4
-
-
42649120679
-
Technical Report, in Trace Realtime Ray Tracing GmbH, No inTrace-2006-001 (submitted for publication)
-
C. Benthin, I. Wald, M. Scherbaum, and H. Friedrich. Ray Tracing on the CELL Processor. Technical Report, in Trace Realtime Ray Tracing GmbH, No inTrace-2006-001 (submitted for publication), 2006.
-
(2006)
-
-
Benthin, C.1
Wald, I.2
Scherbaum, M.3
Friedrich, H.4
-
6
-
-
60649109371
-
Maximizing the Power of the Cell Broadband Engine Processor: 25 Tips to Optimal Application Performance
-
jun
-
D. A. Brokenshire. Maximizing the Power of the Cell Broadband Engine Processor: 25 Tips to Optimal Application Performance. IBM developerWorks, jun 2006.
-
(2006)
IBM developerWorks
-
-
Brokenshire, D.A.1
-
7
-
-
33646532283
-
-
M. Charalambous, P. Trancoso, and A. Stamatakis. Initial Experiences Porting a Bioinformatics Application to a Graphics Processor. In In Proceedings of the 10th Panhellenic Conference on Informatics (PCI 2005), pages 415-425, 2005.
-
M. Charalambous, P. Trancoso, and A. Stamatakis. Initial Experiences Porting a Bioinformatics Application to a Graphics Processor. In In Proceedings of the 10th Panhellenic Conference on Informatics (PCI 2005), pages 415-425, 2005.
-
-
-
-
9
-
-
29144484019
-
Maximum Likelihood of Evolutionary Trees: Hardness and Approximation
-
B. Chor and T. Tuller. Maximum Likelihood of Evolutionary Trees: Hardness and Approximation. Bioinformatics, 21(1):97-106, 2005.
-
(2005)
Bioinformatics
, vol.21
, Issue.1
, pp. 97-106
-
-
Chor, B.1
Tuller, T.2
-
10
-
-
33746061683
-
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
-
T. Z. DeSantis, P. Hugenholtz, N. Larsen, M. Rojas, E. L. Brodie, K. Keller, T. Huber, D. Dalevi, P. Hu, and G. L. Andersen. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB. Appl. Environ. Microbiol., 72(7):5069-5072, 2006.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, Issue.7
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
13
-
-
0019797407
-
-
J. Felsenstein. Evolutionary Trees From. DNA Sequences: A Maximum Likelihood Approach. Journal of Molecular Evolution, 17:368-376, 198.1.
-
J. Felsenstein. Evolutionary Trees From. DNA Sequences: A Maximum Likelihood Approach. Journal of Molecular Evolution, 17:368-376, 198.1.
-
-
-
-
14
-
-
34748882522
-
-
G. W. Grimm, S. S. Renner, A. Stamatakis, and V. Hemleben. A Nuclear Ribosomal DNA Phytogeny of Acer Inferred With Maximum Likelihood, Splits Graphs, and Motif Analyses of 606 Sequences. Evolutionary Bioinformatics Online, 2006. to be published.
-
G. W. Grimm, S. S. Renner, A. Stamatakis, and V. Hemleben. A Nuclear Ribosomal DNA Phytogeny of Acer Inferred With Maximum Likelihood, Splits Graphs, and Motif Analyses of 606 Sequences. Evolutionary Bioinformatics Online, 2006. to be published.
-
-
-
-
15
-
-
0242578620
-
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum. Likelihood
-
S. Guinden and O. Gascuel. A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum. Likelihood. Syst. Biol., 52(5):696-704, 2003.
-
(2003)
Syst. Biol
, vol.52
, Issue.5
, pp. 696-704
-
-
Guinden, S.1
Gascuel, O.2
-
17
-
-
33746923043
-
Cell Multiprocessor Interconnection Network: Built for Speed
-
263, MayJune, Available from
-
M. Kistler, M. Pen-one, and F. Petrini. Cell Multiprocessor Interconnection Network: Built for Speed. IEEE Micro, 26(3), MayJune 2006. Available from http://hpc.pnl.gov/people/fabrizio/papers/ieeemicro-cell. pdf.
-
(2006)
IEEE Micro
-
-
Kistler, M.1
Pen-one, M.2
Petrini, F.3
-
18
-
-
33646584137
-
Unexpected Diversity and Complexity of the Guerrero Negro Hypersaline Microbial Mat
-
May
-
R. E. Ley, J. K. Harris, J. Wilcox, J. R. Spear, S. R. Miller, B. M. Bebout, J. A. Maresca, D. A. Bryant, M. L. Sogin, and N. R. Pace. Unexpected Diversity and Complexity of the Guerrero Negro Hypersaline Microbial Mat. Appl. Envir. Microbiol., 72(5):3685 -3695, May 2006.
-
(2006)
Appl. Envir. Microbiol
, vol.72
, Issue.5
, pp. 3685-3695
-
-
Ley, R.E.1
Harris, J.K.2
Wilcox, J.3
Spear, J.R.4
Miller, S.R.5
Bebout, B.M.6
Maresca, J.A.7
Bryant, D.A.8
Sogin, M.L.9
Pace, N.R.10
-
19
-
-
23344442120
-
Obesity Alters Gut Microbial Ecology
-
R.E. Ley, F. Backhed, P. Turnbaugh, CA. Lozupone, R.D. Knight, and J.I. Gordon. Obesity Alters Gut Microbial Ecology. Proceedings of the National Academy of Sciences of the United States of America, 102(31):11070-11075, 2005.
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.31
, pp. 11070-11075
-
-
Ley, R.E.1
Backhed, F.2
Turnbaugh, P.3
Lozupone, C.A.4
Knight, R.D.5
Gordon, J.I.6
-
20
-
-
85142151952
-
-
B. Q. Minh, L. .y Vinh, A. von Haeseler, and H. A. Schmidt. pIQPNNI: Parallel Reconstruction of Large Maximum Likelihood Phylogenies. Bioinformatics, 21(19):3794-3796, 2005.
-
B. Q. Minh, L. .y Vinh, A. von Haeseler, and H. A. Schmidt. pIQPNNI: Parallel Reconstruction of Large Maximum Likelihood Phylogenies. Bioinformatics, 21(19):3794-3796, 2005.
-
-
-
-
21
-
-
34748925126
-
-
B. Minor, G. Possum, and V. To. Terrain Renderin Engine (TRE), http:// www.research.ibm.com/cell/whitepapers/TRE.pdf. May 2005.
-
B. Minor, G. Possum, and V. To. Terrain Renderin Engine (TRE), http:// www.research.ibm.com/cell/whitepapers/TRE.pdf. May 2005.
-
-
-
-
23
-
-
27844500146
-
Phylogenetic Diversity and Ecology of Environmental Archaea
-
CE. Robertson, J.K. Harris, J.R.Spear, and N.R. Pace. Phylogenetic Diversity and Ecology of Environmental Archaea. Current Opinion in Microbiology, 8:638-642, 2005.
-
(2005)
Current Opinion in Microbiology
, vol.8
, pp. 638-642
-
-
Robertson, C.E.1
Harris, J.K.2
Spear, J.R.3
Pace, N.R.4
-
24
-
-
14644397888
-
Raxml-iii: A Fast Program, for Maximum Likelihood-Based Inference of Large Phylogenetic Trees
-
A. Stamatakis, T. Ludwig, and H. Meier. Raxml-iii: A Fast Program, for Maximum Likelihood-Based Inference of Large Phylogenetic Trees. Bioinformatics, 21(4):456-463, 2005.
-
(2005)
Bioinformatics
, vol.21
, Issue.4
, pp. 456-463
-
-
Stamatakis, A.1
Ludwig, T.2
Meier, H.3
-
25
-
-
26844521242
-
Raxml-omp: An Efficient Program for Phylogenetic Inference on SMPs
-
A. Stamatakis, M. Ott, and T. Ludwig. Raxml-omp: An Efficient Program for Phylogenetic Inference on SMPs. In Proc. of PaCT05, pages 288-302, 2005.
-
(2005)
Proc. of PaCT05
, pp. 288-302
-
-
Stamatakis, A.1
Ott, M.2
Ludwig, T.3
-
26
-
-
33750403801
-
RAxML-VI-HPC: Maximum. Likelihood-Based Phylogenetic Analyses With Thousands of Taxa and Mixed Models
-
A. Stamatakis. RAxML-VI-HPC: Maximum. Likelihood-Based Phylogenetic Analyses With Thousands of Taxa and Mixed Models. Bioinformatics, page btl446, 2006.
-
(2006)
Bioinformatics
-
-
Stamatakis, A.1
-
28
-
-
34247349114
-
The Potentinal of the Cell Processor for Scientific Computing
-
May 3-6
-
S. Williams, J. Shalf, L. Oliker, S. Kamil, P. Husbands, and K. Yelick. The Potentinal of the Cell Processor for Scientific Computing. ACM International Conference on Computing Frontiers, May 3-6 2006.
-
(2006)
ACM International Conference on Computing Frontiers
-
-
Williams, S.1
Shalf, J.2
Oliker, L.3
Kamil, S.4
Husbands, P.5
Yelick, K.6
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