-
1
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4 A ° resolution
-
Ban, N., Nissen, P., Hansen, J., Moore, P.B., and Steitz, T.A. 2000. The complete atomic structure of the large ribosomal subunit at 2.4 A ° resolution. Science 289: 905-920.
-
(2000)
Science
, vol.289
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
2
-
-
0142105383
-
Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity
-
De la Peña, M., Gago, S., and Flores, R. 2003. Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity. EMBO J. 22: 5561-5570.
-
(2003)
EMBO J
, vol.22
, pp. 5561-5570
-
-
De la Peña, M.1
Gago, S.2
Flores, R.3
-
3
-
-
0032497521
-
Crystal structure of a hepatitis delta virus ribozyme
-
Ferré-D'Amaré, A.R., Zhou, K., and Doudna, J.A. 1998. Crystal structure of a hepatitis delta virus ribozyme. Nature 395: 567-574.
-
(1998)
Nature
, vol.395
, pp. 567-574
-
-
Ferré-D'Amaré, A.R.1
Zhou, K.2
Doudna, J.A.3
-
4
-
-
0026771509
-
Numbering system for the hammerhead
-
Hertel, K.J., Pardi, A., Uhlenbeck, O.C., Koizumi, M., Ohtsuka, E., Uesugi, S., Cedergren, R., Eckstein, F., Gerlach, W.L., Hodgson, R., et al. 1992. Numbering system for the hammerhead. Nucleic Acids Res. 20: 3252.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 3252
-
-
Hertel, K.J.1
Pardi, A.2
Uhlenbeck, O.C.3
Koizumi, M.4
Ohtsuka, E.5
Uesugi, S.6
Cedergren, R.7
Eckstein, F.8
Gerlach, W.L.9
Hodgson, R.10
-
5
-
-
2442641641
-
A conformational switch controls hepatitis delta virus ribozyme catalysis
-
Ke, A., Zhou, K., Ding, F., Cate, J.H., and Doudna, J.A. 2004. A conformational switch controls hepatitis delta virus ribozyme catalysis. Nature 429: 201-205.
-
(2004)
Nature
, vol.429
, pp. 201-205
-
-
Ke, A.1
Zhou, K.2
Ding, F.3
Cate, J.H.4
Doudna, J.A.5
-
6
-
-
0043009734
-
Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity
-
Khvorova, A., Lescoute, A., Westhof, E., and Jayasena, S.D. 2003. Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity. Nat. Struct. Biol. 10: 708-712.
-
(2003)
Nat. Struct. Biol
, vol.10
, pp. 708-712
-
-
Khvorova, A.1
Lescoute, A.2
Westhof, E.3
Jayasena, S.D.4
-
7
-
-
0035423087
-
The kink-turn: A new RNA secondary structure motif
-
Klein, D.J., Schmeing, T.M., Moore, P.B., and Steitz, T.A. 2001. The kink-turn: A new RNA secondary structure motif. EMBO J. 20: 4214-4221.
-
(2001)
EMBO J
, vol.20
, pp. 4214-4221
-
-
Klein, D.J.1
Schmeing, T.M.2
Moore, P.B.3
Steitz, T.A.4
-
8
-
-
33748582906
-
Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements
-
Korostelev, A., Trakhanov, S., Laurberg, M., and Noller, H.F. 2006. Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements. Cell 126: 1065-1077.
-
(2006)
Cell
, vol.126
, pp. 1065-1077
-
-
Korostelev, A.1
Trakhanov, S.2
Laurberg, M.3
Noller, H.F.4
-
9
-
-
0037093486
-
The global structure of the VS ribozyme
-
Lafontaine, D.A., Norman, D.G., and Lilley, D.M. 2002. The global structure of the VS ribozyme. EMBO J. 21: 2461-2471.
-
(2002)
EMBO J
, vol.21
, pp. 2461-2471
-
-
Lafontaine, D.A.1
Norman, D.G.2
Lilley, D.M.3
-
10
-
-
0037102491
-
The non-Watson-Crick base pairs and their associated isostericity matrices
-
Leontis, N.B., Stombaugh, J., and Westhof, E. 2002. The non-Watson-Crick base pairs and their associated isostericity matrices. Nucleic Acids Res. 30: 3497-3531.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3497-3531
-
-
Leontis, N.B.1
Stombaugh, J.2
Westhof, E.3
-
11
-
-
17844366343
-
Recurrent structural RNA motifs, isostericity matrices and sequence alignments
-
Lescoute, A., Leontis, N.B., Massire, C., and Westhof, E. 2005. Recurrent structural RNA motifs, isostericity matrices and sequence alignments. Nucleic Acids Res. 33: 2395-2409.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2395-2409
-
-
Lescoute, A.1
Leontis, N.B.2
Massire, C.3
Westhof, E.4
-
12
-
-
20444502087
-
Structure, folding, and mechanisms of ribozymes
-
Lilley, D.M. 2005. Structure, folding, and mechanisms of ribozymes. Curr. Opin. Struct. Biol. 15: 313-323.
-
(2005)
Curr. Opin. Struct. Biol
, vol.15
, pp. 313-323
-
-
Lilley, D.M.1
-
13
-
-
33746228126
-
Tertiary contacts distant from the active site prime a ribozyme for catalysis
-
Martick, M. and Scott, W.G. 2006. Tertiary contacts distant from the active site prime a ribozyme for catalysis. Cell 126: 309-320.
-
(2006)
Cell
, vol.126
, pp. 309-320
-
-
Martick, M.1
Scott, W.G.2
-
14
-
-
0023651444
-
Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
-
Milligan, J.F., Groebe, D.R., Witherall, G.W., and Uhlenbeck, O.C. 1987. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res. 15: 8783-8798.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 8783-8798
-
-
Milligan, J.F.1
Groebe, D.R.2
Witherall, G.W.3
Uhlenbeck, O.C.4
-
15
-
-
33746938267
-
When to believe what you see
-
Nelson, J.A. and Uhlenbeck, O.C. 2006. When to believe what you see. Mol. Cell 23: 447-450.
-
(2006)
Mol. Cell
, vol.23
, pp. 447-450
-
-
Nelson, J.A.1
Uhlenbeck, O.C.2
-
16
-
-
0035942248
-
RNA tertiary interactions in the large ribosomal subunit: The A-minor motif
-
Nissen, P., Ippolito, J.A., Ban, N., Moore, P.B., and Steitz, T.A. 2001. RNA tertiary interactions in the large ribosomal subunit: The A-minor motif. Proc. Natl. Acad. Sci. 98: 4899-4903.
-
(2001)
Proc. Natl. Acad. Sci
, vol.98
, pp. 4899-4903
-
-
Nissen, P.1
Ippolito, J.A.2
Ban, N.3
Moore, P.B.4
Steitz, T.A.5
-
17
-
-
1942533453
-
Folding of the natural hammerhead ribozyme is enhanced by interaction of auxiliary elements
-
Penedo, J.C., Wilson, T.J., Jayasena, S.D., Khvorova, A., and Lilley, D.M. 2004. Folding of the natural hammerhead ribozyme is enhanced by interaction of auxiliary elements. RNA 10: 880-888.
-
(2004)
RNA
, vol.10
, pp. 880-888
-
-
Penedo, J.C.1
Wilson, T.J.2
Jayasena, S.D.3
Khvorova, A.4
Lilley, D.M.5
-
18
-
-
33750994332
-
The Hammerhead ribozyme structure brought in line
-
Przybilski, R. and Hammann, C. 2006. The Hammerhead ribozyme structure brought in line. ChemBioChem 7: 1641-1644.
-
(2006)
ChemBioChem
, vol.7
, pp. 1641-1644
-
-
Przybilski, R.1
Hammann, C.2
-
19
-
-
34250626771
-
Idiosyncratic cleavage and ligation activity of individual hammerhead ribozymes and core sequence variants thereof
-
Przybilski, R. and Hammann, C. 2007. Idiosyncratic cleavage and ligation activity of individual hammerhead ribozymes and core sequence variants thereof. Biol. Chem. 388: 737-741.
-
(2007)
Biol. Chem
, vol.388
, pp. 737-741
-
-
Przybilski, R.1
Hammann, C.2
-
20
-
-
32644439149
-
Functional hammerhead ribozymes naturally encoded in the genome of Arabidopsis thaliana
-
Przybilski, R., Gräf, S., Lescoute, A., Nellen, W., Westhof, E., Steger, G., and Hammann, C. 2005. Functional hammerhead ribozymes naturally encoded in the genome of Arabidopsis thaliana. Plant Cell 17: 1877-1885.
-
(2005)
Plant Cell
, vol.17
, pp. 1877-1885
-
-
Przybilski, R.1
Gräf, S.2
Lescoute, A.3
Nellen, W.4
Westhof, E.5
Steger, G.6
Hammann, C.7
-
21
-
-
0029948820
-
A long-range pseudoknot is required for activity of the Neurospora VS ribozyme
-
Rastogi, T., Beattie, T.L., Olive, J.E., and Collins, R.A. 1996. A long-range pseudoknot is required for activity of the Neurospora VS ribozyme. EMBO J. 15: 2820-2825.
-
(1996)
EMBO J
, vol.15
, pp. 2820-2825
-
-
Rastogi, T.1
Beattie, T.L.2
Olive, J.E.3
Collins, R.A.4
-
22
-
-
0035848837
-
Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis
-
Rupert, P.B. and Ferré-D'Amaré, A.R. 2001. Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis. Nature 410: 780-786.
-
(2001)
Nature
, vol.410
, pp. 780-786
-
-
Rupert, P.B.1
Ferré-D'Amaré, A.R.2
-
23
-
-
33749034196
-
A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene
-
Salehi-Ashtiani, K., Luptak, A., Litovchick, A., and Szostak, J.W. 2006. A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene. Science 313: 1788-1792.
-
(2006)
Science
, vol.313
, pp. 1788-1792
-
-
Salehi-Ashtiani, K.1
Luptak, A.2
Litovchick, A.3
Szostak, J.W.4
-
24
-
-
0034268836
-
Structure of functionally activated small ribosomal subunit at 3.3 Å resolution
-
Schluenzen, F., Tocilj, A., Zarivach, R., Harms, J., Gluehmann, M., Janell, D., Bashan, A., Bartels, H., Agmon, I., Franceschi, F., et al. 2000. Structure of functionally activated small ribosomal subunit at 3.3 Å resolution. Cell 102: 615-623.
-
(2000)
Cell
, vol.102
, pp. 615-623
-
-
Schluenzen, F.1
Tocilj, A.2
Zarivach, R.3
Harms, J.4
Gluehmann, M.5
Janell, D.6
Bashan, A.7
Bartels, H.8
Agmon, I.9
Franceschi, F.10
-
25
-
-
34250663452
-
Morphing the minimal and full-length hammerhead ribozymes: Implications for the cleavage mechanism
-
Scott, W.G. 2007. Morphing the minimal and full-length hammerhead ribozymes: Implications for the cleavage mechanism. Biol. Chem. 388: 727-735.
-
(2007)
Biol. Chem
, vol.388
, pp. 727-735
-
-
Scott, W.G.1
-
27
-
-
33846502132
-
A tale in molecular recognition: The hammerhead ribozyme
-
Westhof, E. 2007. A tale in molecular recognition: The hammerhead ribozyme. J. Mol. Recognit. 20: 1-3.
-
(2007)
J. Mol. Recognit
, vol.20
, pp. 1-3
-
-
Westhof, E.1
-
28
-
-
34249098371
-
A guanine nucleobase important for catalysis by the VS ribozyme
-
Wilson, T.J., McLeod, A.C., and Lilley, D.M.J. 2007. A guanine nucleobase important for catalysis by the VS ribozyme. EMBO J. 26: 2489-2500.
-
(2007)
EMBO J
, vol.26
, pp. 2489-2500
-
-
Wilson, T.J.1
McLeod, A.C.2
Lilley, D.M.J.3
-
29
-
-
0035957327
-
Formation of a GNRA tetraloop in P5abc can disrupt an interdomain interaction in the Tetrahymena group I ribozyme
-
Zheng, M., Wu, M., and Tinoco Jr., I. 2001. Formation of a GNRA tetraloop in P5abc can disrupt an interdomain interaction in the Tetrahymena group I ribozyme. Proc. Natl. Acad. Sci. 98: 3695-3700.
-
(2001)
Proc. Natl. Acad. Sci
, vol.98
, pp. 3695-3700
-
-
Zheng, M.1
Wu, M.2
Tinoco Jr., I.3
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