-
1
-
-
33748790399
-
Realization of a four-step molecular switch in scanning-tunneling microscope manipulation of single chlorophyll-a molecules
-
Iancu V and Hla S W 2006 Realization of a four-step molecular switch in scanning-tunneling microscope manipulation of single chlorophyll-a molecules Proc. Natl Acad. Sci. USA 103 13718-21
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, Issue.37
, pp. 13718-13721
-
-
Iancu, V.1
Hla, S.W.2
-
2
-
-
0032661796
-
Constructing nanomechanical devices powered by biomolecules motors
-
Montemagno C and Bachand G 1999 Constructing nanomechanical devices powered by biomolecules motors Nanotechnology 10 225-31
-
(1999)
Nanotechnology
, vol.10
, Issue.3
, pp. 225-231
-
-
Montemagno, C.1
Bachand, G.2
-
3
-
-
23044476985
-
Molecular dynamics simulations of proteins in lipid bilayers
-
Gumbart J, Wang Y, Aksimentiev A, Tajkhorshid E and Schulten K 2005 Molecular dynamics simulations of proteins in lipid bilayers Curr. Opin. Struct. Biol. 15 423-31
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, Issue.4
, pp. 423-431
-
-
Gumbart, J.1
Wang, Y.2
Aksimentiev, A.3
Tajkhorshid, E.4
Schulten, K.5
-
4
-
-
0034621834
-
Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 Å resolution
-
Toyoshima C, Nakasako M, Nomura H and Ogawa H 2000 Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 Å resolution Nature 405 647-55
-
(2000)
Nature
, vol.405
, Issue.6787
, pp. 647-655
-
-
Toyoshima, C.1
Nakasako, M.2
Nomura, H.3
Ogawa, H.4
-
5
-
-
26844439857
-
2+
-
2+ Proc. Natl Acad. Sci. USA 102 14489-96
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, Issue.41
, pp. 14489-14496
-
-
Obara, K.1
Miyashita, N.2
Xu, C.3
Toyoshima, I.4
Sugita, Y.5
Inesi, G.6
Toyoshima, C.7
-
6
-
-
9244232176
-
Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues
-
Toyoshima C, Nomura H and Tsuda T 2004 Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues Nature 432 361-8
-
(2004)
Nature
, vol.432
, Issue.7015
, pp. 361-368
-
-
Toyoshima, C.1
Nomura, H.2
Tsuda, T.3
-
7
-
-
33847142225
-
CAVER: A new tool to explore routes from protein clefts, pockets and cavities
-
Petřek M, Otyepka M, Banáš P, Košinová P, Koča J and Damborský J 2006 CAVER: a new tool to explore routes from protein clefts, pockets and cavities BMC Bioinformatics 7 316
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.1
, pp. 316
-
-
Petřek, M.1
Otyepka, M.2
Banáš, P.3
Košinová, P.4
Koča, J.5
Damborský, J.6
-
8
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
Baker N A, Sept D, Joseph S, Holst M J and McCammon J A 2001 Electrostatics of nanosystems: application to microtubules and the ribosome Proc. Natl Acad. Sci. USA 98 10037-41
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, Issue.18
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
10
-
-
0031438285
-
A computer perspective of membranes: Molecular dynamics studies of lipid bilayers systems
-
Tieleman D P, Marrink S J and Berendsen H J C 1997 A computer perspective of membranes: molecular dynamics studies of lipid bilayers systems Biochim. Biophys. Acta 1331 235-70
-
(1997)
Biochim. Biophys. Acta
, vol.1331
, pp. 235-270
-
-
Tieleman, D.P.1
Marrink, S.J.2
Berendsen, H.J.C.3
-
11
-
-
16344362822
-
TMDET: Web server for detecting transmembrane domains by using 3D structure of proteins
-
Tusnády G E, Dosztányi Z and Simon I 2005 TMDET: web server for detecting transmembrane domains by using 3D structure of proteins Bioinformatics 21 1276-7
-
(2005)
Bioinformatics
, vol.21
, Issue.7
, pp. 1276-1277
-
-
Tusnády, G.E.1
Dosztányi, Z.2
Simon, I.3
-
12
-
-
0036618993
-
Setting up and optimization of membrane protein simulations
-
Faraldo-Gómez J D, Smith G R and Sansom M S P 2002 Setting up and optimization of membrane protein simulations Eur. Biophys. J. 31 217-27
-
(2002)
Eur. Biophys. J.
, vol.31
, Issue.3
, pp. 217-227
-
-
Faraldo-Gómez, J.D.1
Smith, G.R.2
Sansom, M.S.P.3
-
13
-
-
0030040323
-
Reduced surface: An efficient way to compute molecular surfaces
-
Sanner M F, Olson A J and Spehner J C 1996 Reduced surface: an efficient way to compute molecular surfaces Biopolymers 38 305-20
-
(1996)
Biopolymers
, vol.38
, Issue.3
, pp. 305-320
-
-
Sanner, M.F.1
Olson, A.J.2
Spehner, J.C.3
-
14
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen H J C, Postma J P M, van Gunsteren W F, Dinola A and Haak J R 1984 Molecular dynamics with coupling to an external bath J. Chem. Phys. 81 3684-90
-
(1984)
J. Chem. Phys.
, vol.81
, Issue.8
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
15
-
-
33846823909
-
Particle mesh Ewald: An Nlog(N) method for Ewald sums in large systems
-
Darden T, York D and Pedersen L 1993 Particle mesh Ewald: an Nlog(N) method for Ewald sums in large systems J. Chem. Phys. 98 10089-92
-
(1993)
J. Chem. Phys.
, vol.98
, Issue.12
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
19
-
-
3142758793
-
The fourth transmembrane segment of the Na, K-ATPase α subunit
-
Horisberger J D, Kharoubi-Hess S, Guennoun S and Michielin O 2004 The fourth transmembrane segment of the Na, K-ATPase α subunit J. Biol. Chem. 279 29542-50
-
(2004)
J. Biol. Chem.
, vol.279
, Issue.28
, pp. 29542-29550
-
-
Horisberger, J.D.1
Kharoubi-Hess, S.2
Guennoun, S.3
Michielin, O.4
-
20
-
-
0034730856
-
Structure of the 5th transmembrane segment of the Na, K-ATPase α subunit: A cysteine-scanning mutagenesis study
-
Guennoun S and Horisberger J D 2000 Structure of the 5th transmembrane segment of the Na, K-ATPase α subunit: a cysteine-scanning mutagenesis study FEBS Lett. 482 144-58
-
(2000)
FEBS Lett.
, vol.482
, Issue.1-2
, pp. 144-158
-
-
Guennoun, S.1
Horisberger, J.D.2
-
21
-
-
0037181169
-
Cysteine-scanning mutagenesis study of the sixth transmembrane segment of the Na,K-ATPase α subunit
-
Guennoun S and Horisberger J D 2002 Cysteine-scanning mutagenesis study of the sixth transmembrane segment of the Na,K-ATPase α subunit FEBS Lett. 513 277-81
-
(2002)
FEBS Lett.
, vol.513
, Issue.2-3
, pp. 277-281
-
-
Guennoun, S.1
Horisberger, J.D.2
-
23
-
-
0033873929
-
Comparative protein structure modeling of genes and genomes
-
Marti-Renom M A, Stuart A C, Fiser A, Sanchez R, Melo F and Sali A 2000 Comparative protein structure modeling of genes and genomes Annu. Rev. Biophys. Biomol. Struct. 29 291-325
-
(2000)
Annu. Rev. Biophys. Biomol. Struct.
, vol.29
, Issue.1
, pp. 291-325
-
-
Marti-Renom, M.A.1
Stuart, A.C.2
Fiser, A.3
Sanchez, R.4
Melo, F.5
Sali, A.6
-
27
-
-
25144472191
-
Electro-chemical modeling challenges of biological ion pumps
-
Rakowski R F, Kaya S and Fonseca J E 2005 Electro-chemical modeling challenges of biological ion pumps J. Comput. Electron. 4 189-93
-
(2005)
J. Comput. Electron.
, vol.4
, Issue.1-2
, pp. 189-193
-
-
Rakowski, R.F.1
Kaya, S.2
Fonseca, J.E.3
-
29
-
-
34748814641
-
-
Law R J, Munson K, Lightstone F C and Sachs G 2007 Understanding the Mechanism of Gastric H,K-ATPase and Designing New Antacid Drugs Biophysical Society 51st Annual Meeting (Baltimore, MD, March)
-
(2007)
Understanding the Mechanism of Gastric H,K-ATPase and Designing New Antacid Drugs Biophysical Society 51st Annual Meeting
-
-
Law, R.J.1
Munson, K.2
Lightstone, F.C.3
Sachs, G.4
-
30
-
-
34247332660
-
Temporal analysis of valence & electrostatics in ion-motive sodium pump
-
Fonseca J E, Kaya S, Guennoun S and Rakowski R F 2007 Temporal analysis of valence & electrostatics in ion-motive sodium pump J. Comput. Electron. 6 381-5
-
(2007)
J. Comput. Electron.
, vol.6
, Issue.1-3
, pp. 381-385
-
-
Fonseca, J.E.1
Kaya, S.2
Guennoun, S.3
Rakowski, R.F.4
-
32
-
-
25444504813
-
Membrane protein structure quality in molecular dynamics simulations
-
Law R J, Capener C, Baaden M, Bond P J, Campbell J, Patargias G, Arinaminpathy V and Sansom M S P 2005 Membrane protein structure quality in molecular dynamics simulations J. Mol. Graph. Model. 24 157-65
-
(2005)
J. Mol. Graph. Model.
, vol.24
, Issue.2
, pp. 157-165
-
-
Law, R.J.1
Capener, C.2
Baaden, M.3
Bond, P.J.4
Campbell, J.5
Patargias, G.6
Arinaminpathy, V.7
Sansom, M.S.P.8
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