Sequence variability and protein domain architectures for bovine Toll-like receptors 1, 5, and 10

Genomics

Volumn 90, Issue 4, 2007, Pages 502-515

  Seabury, C M ^a   Cargill, E J ^a   Womack, J E ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Bacterial pathogens; Cattle; Innate immunity; Leucine rich repeats; Toll like receptors

Indexed keywords

LEUCINE; TOLL LIKE RECEPTOR 1; TOLL LIKE RECEPTOR 10; TOLL LIKE RECEPTOR 5;

ARTICLE; CONTROLLED STUDY; COW; GENE DELETION; GENE INSERTION; INNATE IMMUNITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN VARIANT; SINGLE NUCLEOTIDE POLYMORPHISM;

ANIMALS; CATTLE; CONSERVED SEQUENCE; INDEL MUTATION; MALE; MODELS, BIOLOGICAL; POLYMORPHISM, SINGLE NUCLEOTIDE; PROTEIN STRUCTURE, TERTIARY; SEQUENCE ANALYSIS, DNA; TOLL-LIKE RECEPTOR 1; TOLL-LIKE RECEPTOR 10; TOLL-LIKE RECEPTOR 5; VARIATION (GENETICS);

BACTERIA (MICROORGANISMS); BOS; BOS INDICUS; BOS TAURUS; BOVINAE; MAMMALIA;

EID: 34548618251     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2007.07.001     Document Type: Article

References (40)

1. Vasselon T., and Detmers P.A. Toll receptors: a central element in innate immune responses. Infect. Immun. 70 (2002) 1033-1041
2. Kaisho T., and Akira S. Toll-like receptor function and signaling. J. Allergy Clin. Immunol. 117 (2006) 979-987
3. Stein D., Roth S., Vogelsang E., and Nusselein-Volhard C. The polarity of the dorsoventral axis in the Drosophila embryo is defined by an extracellular signal. Cell 65 (1991) 725-735
4. Lemaitre B., Nicolas E., Michaut L., Reichhart J.M., and Hoffman J.A. The dorsoventral regulatory gene cassette spatzle/Toll/cactus controls the potent antifungal response in Drosophila adults. Cell 86 (1996) 973-983
5. Tauszig S., Jouanguy E., Hoffman J.A., and Imler J.-L. Toll-related receptors and the control of antimicrobial peptide expression in Drosophila. Proc. Natl. Acad. Sci. U. S. A. 97 (2000) 10520-10525
6. Beutler B. Inferences, questions, and possibilities in Toll-like receptor signaling. Nature 430 (2004) 257-263
7. Akira S., and Takeda K. Toll-like receptor signaling. Nat. Rev., Immunol. 4 (2004) 499-511
8. Hasan U., Chaffois C., Gaillard C., Saulnier V., Merck E., Tancredi S., Guiet C., Briere F., Vlach J., Lebecque S., Trinchieri G., and Bates E.E.M. Human TLR10 is a functional receptor, expressed by B cells and plasmacytoid dendritic cells, which activates gene transcription through MyD88. J. Immunol. 174 (2005) 2942-2950
9. Palladino M.A., Johnson T.A., Gupta R., Chapman J.L., and Ojha P. Members of the Toll-like receptor family of innate immunity pattern-recognition receptors are abundant in the male rat reproductive tract. Biol. Reprod. 76 (2007) 958-964
10. Janeway Jr. C.A., and Medzhitov R. Innate immune recognition. Annu. Rev. Immunol. 20 (2002) 197-216
11. Schroder N.W.J., and Schumann R.R. Single nucleotide polymorphisms of Toll-like receptors and susceptibility to infectious disease. Lancet Infect. Dis. 5 (2005) 156-164
12. Merx S., Zimmer W., Neumaier M., and Nejad P.A. Characterization and functional investigation of single nucleotide polymorphisms (SNPs) in the human TLR5 gene. Human Mutat. 880 (2006) 10.1002/humu.9409
13. Menzies M., and Ingham A. Identification and expression of Toll-like receptors 1-10 in selected bovine and ovine tissues. Vet. Immunol. Immunopathol. 109 (2006) 23-30
14. McGuire K., Jones M., Werling D., Williams J.L., Glass E.J., and Jann O. Radiation hybrid mapping of all 10 characterized bovine Toll-like receptors. Anim. Genet. 37 (2005) 47-50
15. Goldammer T., Zerbe H., Molenaar A., Schuberth H.J., Brunner R.M., Kata S.R., and Seyfert H.M. Mastitis increases mammary mRNA abundance of beta-defensin 5, toll-like-receptor 2 (TLR2), and TLR4 but not TLR9 in cattle. Clin. Diagn. Lab. Immunol. 11 (2004) 174-185
16. White S.N., Kata S.R., and Womack J.E. Comparative fine maps of bovine toll-like receptor 4 and toll-like receptor 2 regions. Mamm. Genome 14 (2003) 149-155
17. Werling D., Piercy J., and Coffey T.J. Expression of TOLL-like receptors (TLR) by bovine antigen-presenting cells-potential role in pathogen discrimination?. Vet. Immunol. Immunopathol. 112 (2006) 2-11
18. Opsal M.A., Vage D.I., Hays B., Berget I., and Lien S. Genomic organization and transcript profiling of the bovine toll-like receptor gene cluster TLR6-TLR1-TLR10. Gene 384 (2006) 45-50
19. Ozinsky A., Underhill D.M., Fontenot J.D., Hajjar A.M., Smith K.D., Wilson C.B., Schroeder L., and Aderem A. The repertoire for pattern recognition of pathogens by the innate immune system is defined by cooperation between Toll-like receptors. Proc. Natl. Acad. Sci. U. S. A. 97 (2000) 13766-13771
20. Mukhopadhyay S., Herre J., Brown G.D., and Gordon S. The potential for Toll-like receptors to collaborate with other innate immune receptors. Immunology 112 (2004) 521-530
21. Womack J.E., Johnson J.S., Owens E.K., Rexroad C.E., Schlapfer J., and Yang Y.P. A whole-genome radiation hybrid panel for bovine gene mapping. Mamm. Genome 8 (1997) 854-856
22. Letunic I., Copley R.R., Pils B., Pinkert S., Schultz J., and Bork P. SMART 5: domains in the contexts of genomes and networks. Nucleic Acids Res. 34 (2006) D257-D260
23. Yilmaz A., Shen S., Adelson D.L., Xavier S., and Zhu J.J. Identification and sequence analysis of chicken Toll-like receptors. Immunogenetics 56 (2005) 743-753
24. Bell J.K., Mullen G.E.D., Leifer C.A., Mazzoni A., Davies D.R., and Segal D.M. Leucine-rich repeats and pathogen recognition in Toll-like receptors. Trends Immunol. 24 (2003) 528-533
25. Akira S., and Sato S. Toll-like receptors and their signaling mechanisms. Scand. J. Infect. Dis. 35 (2003) 555-562
26. West A.P., Koblansky A.A., and Ghosh S. Recognition and signaling by Toll-like receptors. Annu. Rev. Cell Dev. Biol. (2006) 409-437
27. Andersen-Nissen E., Smith K.D., Bonneau R., Strong R.K., and Aderem A. A conserved surface on Toll-like receptor 5 recognizes bacterial flagellin. J. Exp. Med. 204 (2007) 393-403
28. Lakoucheva L.M., and Dunker A.K. Order, disorder, and flexibility: prediction from protein sequence. Structure 11 (2003) 1316-1317
29. Klungland H., Sabry A., Heringstad B., Olsen H.G., Gomez-Raya L., Vage D.I., Olsaker I., Odegard J., Klemetsdal G., Schulman N., Vilkki J., Ruane J., Aasland M., Ronningen K., and Lien S. Quantitative trait loci affecting clinical mastitis and somatic cell count in dairy cattle. Mamm. Genome 12 (2001) 837-842
30. Zhang C., de Koning D.-J., Hernandez-Sanchez J., Haley C.S., Williams J.L., and Wiener P. Mapping of multiple quantitative trait loci affecting bovine spongiform encephalopathy. Genetics 167 (2004) 1863-1872
31. Takeuchi O., Sato S., Horiuchi T., Hoshino K., Takeda K., Dong Z., Modlin R.L., and Akira S. Cutting edge: role of Toll-like receptor 1 in mediating immune response to microbial lipoproteins. J. Immun. 169 (2002) 10-14
32. Krutzik S.R., Ochoa M.T., Siebling P.A., Uematsu S., Ng Y.W., Legaspi A., Liu P.T., Cole S.T., Godowski P.J., Maeda Y., Sarno E.N., Norgard M.V., Brennan P.J., Akira S., Rea T.H., and Modlin R.L. Activation and regulation of Toll-like receptors 2 and 1 in human leprosy. Nat. Med. 9 (2003) 525-532
33. Omueti K.O., Mazur D.J., Thompson K.S., Lyle E.A., and Tapping R.I. The polymorphism P315L of human Toll-like receptor 1 impairs innate immune sensing of microbial cell wall components. J. Immunol. 178 (2007) 6387-6394
34. Hawn T.R., Wu H., Grossman J.M., Hahn B.H., Tsao B.P., and Aderem A. A common dominant TLR5 stop codon polymorphism abolished flagellin signaling and is associated with susceptibility to Legionnaire's disease. J. Exp. Med. 198 (2003) 1563-1572
35. Steiner T.S. How flagellin and Toll-like receptor 5 contribute to enteric infection. Infect. Immun. 75 (2007) 545-552
36. Feuillet V., Medjane S., Mondor I., Demaria O., Pagni P.P., Galan J.E., Flavell R.A., and Alexopoulou L. Involvement of Toll-like receptor 5 in the recognition of flagellated bacteria. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 12487-12492
37. Cargill E.J., and Womack J.E. Detection of polymorphisms in bovine toll-like receptors 3, 7, 8, and 9. Genomics (2007) 10.1016/j.ygeno.2007.02.008
38. Bauer S. Toll-erating self DNA. Nat. Immunol. 7 (2006) 13-15
39. Seabury C.M., Womack J.E., Piedrahita J., and Derr J.N. Comparative PRNP genotyping of U.S. cattle sires for potential association with BSE. Mamm. Genome 15 (2004) 828-833
40. Seabury C.M., Honeycutt R.L., Rooney A.P., and Derr J.N. Novel prion protein gene (PRNP) variants and evidence for strong purifying selection in functionally important regions of bovine exon 3. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 15142-15147