-
1
-
-
0037172948
-
Transcription response of
-
to DNA-damaging agents does not identify the genes that protect against these agents.PNAS
-
Birrell, G. W., Brown, J. A., Wu, H. I. et al. (2002). Transcription response of Saccharomyces cerevisiae to DNA-damaging agents does not identify the genes that protect against these agents. PNAS, 99, 8778—8783.
-
(2002)
Saccharomyces Cerevisiae
, vol.99
, pp. 8778-8783
-
-
Birrell, G.W.1
Brown, J.A.2
Wu, H.I.3
-
2
-
-
0032932220
-
Acid- and base-induced proteins during aerobic and anaerobic growth of escherichia coli revealed by two-dimensional gel electrophoresis
-
Blankenhorn, D., Phillips, J. and Slonczowski, J. L. (1999). Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresis. J. Bacteriol., 181, 2209—2216.
-
(1999)
J. Bacteriol
, vol.181
, pp. 2209-2216
-
-
Blankenhorn, D.1
Phillips, J.2
Slonczowski, J.L.3
-
3
-
-
0002619615
-
Coping with osmotic challenges: Osmoregulation through accumulation and release of compatible solutes in bacteria
-
Bremer, E. and Kramer, R. (2000). Coping with osmotic challenges: osmoregulation through accumulation and release of compatible solutes in bacteria. In G. Storz and R. Hengge-Aronis (eds.), Bacterial stress reponses. Washington, DC: ASM Press. 79—97.
-
(2000)
Bacterial stress reponses
, pp. 79-97
-
-
Bremer, E.1
Kramer, R.2
-
4
-
-
0347567138
-
The sigma54 regulon (Sigmulon) of
-
Cases, I., Ussery, D. W. and de Lorenzo, V. (2003). The sigma54 regulon (sigmulon) of Pseudomonas putida. Environ. Microbiol., 5, 1281—1293.
-
(2003)
Pseudomonas Putida. Environ. Microbiol
, vol.5
, pp. 1281-1293
-
-
Cases, I.1
Ussery, D.W.2
De Lorenzo, V.3
-
5
-
-
0037316190
-
-
antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of
-
Cheung, K. J., Badarinarayana, V., Selinger, D. W., Janse, D. and Church, G. M. A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli. Genome Res., 13, 206—215.
-
Escherichia Coli. Genome Res
, vol.13
, pp. 206-215
-
-
Cheung, K.J.1
Badarinarayana, V.2
Selinger, D.W.3
Janse, D.4
Church, G.M.5
-
6
-
-
33644748620
-
Global analysis of heat shock response in desulfovibrio vulgaris hildenborough
-
Chhabra, S. R., He, Q., Huang, K. H. et al. (2006). Global analysis of heat shock response in Desulfovibrio vulgaris Hildenborough. J. Bacteriol., 188, 1817—1828.
-
(2006)
J. Bacteriol
, vol.188
, pp. 1817-1828
-
-
Chhabra, S.R.1
He, Q.2
Huang, K.H.3
-
7
-
-
0035987143
-
Local mean normalization of microarray element signal intensities across an array surface: Quality control and correction of spatially systematic artifacts
-
Colantuoni, C., Henry, G., Zeger, S. and Pevsner, J. (2002). Local mean normalization of microarray element signal intensities across an array surface: quality control and correction of spatially systematic artifacts. Biotechniques, 32, 1316—1320.
-
(2002)
Biotechniques
, vol.32
, pp. 1316-1320
-
-
Colantuoni, C.1
Henry, G.2
Zeger, S.3
Pevsner, J.4
-
8
-
-
0001570910
-
Osmoregulation
-
F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, Washington, DC: ASM Press
-
Csonka, L. N. and Epstein, W. (1996). Osmoregulation. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham et al. (eds.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd edn. Washington, DC: ASM Press. 1210—1223.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 1210-1223
-
-
Csonka, L.N.1
Epstein, W.2
-
9
-
-
84928619020
-
-
Cypionka, H. (1995). Solute transport and cell energetics. In L. L. Barton (ed.), Sulphate-reducing bacteria. New York: Plenum Press. 151—184.
-
(1995)
, pp. 151-184
-
-
Cypionka, H.1
-
10
-
-
9444285788
-
-
acid resistance: tales of an amateur acidophile
-
Foster, J. W. (2004). Escherichia coli acid resistance: tales of an amateur acidophile. Nat. Rev. Microbiol., 11, 898—907.
-
(2004)
Escherichia Coli
, vol.11
, pp. 898-907
-
-
Foster, J.W.1
-
11
-
-
0037173615
-
Functional profiling of the saccharomyces cerevisiae genome
-
Giaever, G., Chu, A. M., Ni, L. et al. (2002). Functional profiling of the Saccharomyces cerevisiae genome. Nature, 418, 387—391.
-
(2002)
Nature
, vol.418
, pp. 387-391
-
-
Giaever, G.1
Chu, A.M.2
Ni, L.3
-
12
-
-
0026545972
-
Enzymatic uranium precipitation
-
Gorby, Y. A. and Lovley, D. R. (1992). Enzymatic uranium precipitation. Environ. Sci. Technol., 26, 205—207.
-
(1992)
Environ. Sci. Technol
, vol.26
, pp. 205-207
-
-
Gorby, Y.A.1
Lovley, D.R.2
-
13
-
-
0031658803
-
A superfamily of proteins that contain the cold-shock domain
-
Graumann, P. L. and Marahiel, M. A. (1998). A superfamily of proteins that contain the cold-shock domain. Trends Biochem. Sci., 23, 286—290.
-
(1998)
Trends Biochem. Sci
, vol.23
, pp. 286-290
-
-
Graumann, P.L.1
Marahiel, M.A.2
-
14
-
-
0037964766
-
Nitrite reductase activity of sulphate-reducing bacteria prevents their inhibition by nitrate-reducing sulfide-oxidizing bacteria
-
Greene, E. A., Hubert, C., Nemati, M., Jenneman, G. E. andVoordouw, G. (2003). Nitrite reductase activity of sulphate-reducing bacteria prevents their inhibition by nitrate-reducing sulfide-oxidizing bacteria. Environ. Microbiol., 5, 607—617.
-
(2003)
Environ. Microbiol
, vol.5
, pp. 607-617
-
-
Greene, E.A.1
Hubert, C.2
Nemati, M.3
Jenneman, G.E.4
Voordouw, G.5
-
15
-
-
0001241680
-
Function and regulation of the heat shock proteins
-
F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C.C., Washington, D.C.: ASM Press
-
Gross, C. A. (1996). Function and regulation of the heat shock proteins. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C.C. et al. (eds.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd edn. Washington, D.C.: ASM Press. 1382—1399.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 1382-1399
-
-
Gross, C.A.1
-
16
-
-
0002527811
-
The art of keeping low and high iron concentrations in balance
-
G. Storz and R. Hengge-Aronis, Washington, DC: ASM Press
-
Hantke, K. and Braun, V. (2000). The art of keeping low and high iron concentrations in balance. In G. Storz and R. Hengge-Aronis (eds.), Bacterial stress reponses. Washington, DC: ASM Press. 275—288.
-
(2000)
Bacterial Stress Reponses
, pp. 275-288
-
-
Hantke, K.1
Braun, V.2
-
17
-
-
9244240775
-
Physiological and gene expression analysis of inhibition of desulfovibrio vulgaris hildenborough by nitrite
-
Haveman, S. A., Greene, E. A., Stilwell, C. P., Voordouw, J. K. and Voordouw, G. Physiological and gene expression analysis of inhibition of Desulfovibrio vulgaris Hildenborough by nitrite. J. Bacteriol., 186, 7944—7950.
-
J. Bacteriol
, vol.186
, pp. 7944-7950
-
-
Haveman, S.A.1
Greene, E.A.2
Stilwell, C.P.3
Voordouw, J.K.4
Voordouw, G.5
-
18
-
-
33745152320
-
Energetic consequences of nitrite stress in desulfovibrio vulgaris hildenborough inferred from global transcriptional analysis
-
He, Q., Huang, K. H., He, Z. et al. (2006). Energetic consequences of nitrite stress in Desulfovibrio vulgaris Hildenborough inferred from global transcriptional analysis. Appl. Environ. Microbiol., 72, 4370—4381.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 4370-4381
-
-
He, Q.1
Huang, K.H.2
He, Z.3
-
19
-
-
2342475768
-
The genomic sequence of the anaerobic, sulphate-reducing bacterium desulfovibrio vulgaris hildenborough
-
Heidelberg, J. F., Seshadri, R., Haveman, S. A. et al. (2004). The genomic sequence of the anaerobic, sulphate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Nat. Biotechnol., 22, 554—559.
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 554-559
-
-
Heidelberg, J.F.1
Seshadri, R.2
Haveman, S.A.3
-
20
-
-
0000291637
-
The general stress response in escherichia coli
-
G. Storz and R. Hengge-Aronis, Washington, DC: ASM Press
-
Hengge-Aronis, R. (2000). The general stress response in Escherichia coli. In G. Storz and R. Hengge-Aronis (eds.), Bacterial stress reponses. Washington, DC: ASM Press. 161—178.
-
(2000)
Bacterial Stress Reponses
, pp. 161-178
-
-
Hengge-Aronis, R.1
-
21
-
-
0029786252
-
Rbfa, a 30s ribosomal binding factor, is a cold-shock protein whose absence triggers the cold-shock response
-
Jones, P. G. and Inouye, M. (1996). RbfA, a 30S ribosomal binding factor, is a cold-shock protein whose absence triggers the cold-shock response. Mol. Microbiol., 21, 1207—1218.
-
(1996)
Mol. Microbiol
, vol.21
, pp. 1207-1218
-
-
Jones, P.G.1
Inouye, M.2
-
22
-
-
0027487221
-
Characterization of the ferrous iron uptake system of
-
Kammler, M., Schon, C. and Hantke, K. (1993). Characterization of the ferrous iron uptake system of Escherichia coli. J. Bacteriol., 175, 6212—6219.
-
(1993)
Escherichia Coli. J. Bacteriol
, vol.175
, pp. 6212-6219
-
-
Kammler, M.1
Schon, C.2
Hantke, K.3
-
23
-
-
27144544090
-
Nsps, a predicted polyamine sensor, mediates activation of vibrio cholerae biofilm formation by norspermidine
-
Karatan, E., Duncan, T. R. andWatnick, P. I. (2005). NspS, a predicted polyamine sensor, mediates activation of Vibrio cholerae biofilm formation by norspermidine. J. Bacteriol., 187, 7434—7443.
-
(2005)
J. Bacteriol
, vol.187
, pp. 7434-7443
-
-
Karatan, E.1
Duncan, T.R.2
Watnick, P.3
-
24
-
-
0031458333
-
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon
-
Klenk, H. P., Clayton, R. A., Tomb, J. F. et al. (1997). The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobusfulgidus. Nature, 390, 364—370.
-
(1997)
Archaeoglobusfulgidus. Nature
, vol.390
, pp. 364-370
-
-
Klenk, H.P.1
Clayton, R.A.2
Tomb, J.F.3
-
25
-
-
0025920876
-
Microbial reduction of uranium
-
Lovley, D. R., Phillips, E. J.P., Gorby, Y. A. and Landa, E. (1991). Microbial reduction of uranium. Nature, 350, 413—416.
-
(1991)
Nature
, vol.350
, pp. 413-416
-
-
Lovley, D.R.1
Phillips, E.2
Gorby, Y.A.3
Landa, E.4
-
26
-
-
0000146510
-
Amino acids as carbon sources
-
F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, Washington, DC: ASM Press
-
McFall, E. and Newman, E. B. (1996). Amino acids as carbon sources. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham (eds.), Escherichia coli and Salmonella: Cellular and Molecular Biology, 2nd edn. Washington, DC: ASM Press. 358—379.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 358-379
-
-
Mc Fall, E.1
Newman, E.B.2
-
27
-
-
0033988198
-
Role of hrca and circe in the heat shock regulatory network of
-
Minder, A. C., Fischer, H.-M., Hennecke, H. and Narberhaus, F. (2000). Role of HrcA and CIRCE in the heat shock regulatory network of Bradyrhizobium japonicum. J. Bacteriol., 182, 14—22.
-
(2000)
Bradyrhizobium Japonicum. J. Bacteriol
, vol.182
, pp. 14-22
-
-
Minder, A.C.1
Fischer, H.-M.2
Hennecke, H.3
Narberhaus, F.4
-
28
-
-
0031253537
-
Nitrate and nitrite utilization in sulphate-reducing bacteria
-
Moura, I., Bursakov, S., Costa, C. and Moura, J. J. G. (1997). Nitrate and nitrite utilization in sulphate-reducing bacteria. Anaerobe, 3, 279—90.
-
(1997)
Anaerobe
, vol.3
, pp. 279-290
-
-
Moura, I.1
Bursakov, S.2
Costa, C.3
Moura, J.4
-
29
-
-
33744776637
-
Salt stress in desulfovibrio vulgaris hildenborough: An integrated genomics approach
-
Mukhopadhyay, A., He, Z., Yen, H.-C. (2006). Salt stress in Desulfovibrio vulgaris Hildenborough: an integrated genomics approach. J. Bacteriol., 188, 4068—4078.
-
(2006)
J. Bacteriol
, vol.188
, pp. 4068-4078
-
-
Mukhopadhyay, A.1
He, Z.2
Yen, H.-C.3
-
30
-
-
1842637867
-
Incidence and function of sigma factors in ralstonia metallidurans and other bacteria
-
Nies, D. H. (2004). Incidence and function of sigma factors in Ralstonia metallidurans and other bacteria. Arch. Microbiol., 181, 255—268.
-
(2004)
Arch. Microbiol
, vol.181
, pp. 255-268
-
-
Nies, D.H.1
-
31
-
-
0034739244
-
Characterization of heme c nitrite reductase from a non-ammonifying microorganism, desulfovibrio vulgaris hildenborough
-
Pereira, I. A. C., LeGall, J., Zavier, A. V. and Teixeira, M. (2000). Characterization of heme c nitrite reductase from a non-ammonifying microorganism, Desulfovibrio vulgaris Hildenborough. Biochim. Biophys. Acta, 1481, 119—130.
-
(2000)
Biochim. Biophys. Acta
, vol.1481
, pp. 119-130
-
-
Pereira, I.1
Le Gall, J.2
Zavier, A.V.3
Teixeira, M.4
-
32
-
-
0002872836
-
The cold shock response
-
G. Storz and R. Hengge-Aronis, Washington, DC: ASM Press
-
Phadtare, S., Yamanaka, K. and Inouye, M. (2000). The cold shock response. In G. Storz and R. Hengge-Aronis (eds.), Bacterial stress responses. Washington, DC: ASM Press. 33—45.
-
(2000)
Bacterial Stress Responses
, pp. 33-45
-
-
Phadtare, S.1
Yamanaka, K.2
Inouye, M.3
-
33
-
-
0004233143
-
-
Cambridge and London: Cambridge University Press
-
Postgate, J. R. (1984). The sulphate reducing bacteria (2nd edn). Cambridge and London: Cambridge University Press.
-
(1984)
The Sulphate Reducing Bacteria
-
-
Postgate, J.R.1
-
34
-
-
4344713183
-
The genome desulfotalea psychrophila, a sulphate-reducing bacterium from permanently cold artic sediments
-
Rabus, R., Ruepp, A., Frickey, T. et al. (2004). The genome Desulfotalea psychrophila, a sulphate-reducing bacterium from permanently cold Artic sediments. Environ. Microbiol., 6, 887—902.
-
(2004)
Environ. Microbiol
, vol.6
, pp. 887-902
-
-
Rabus, R.1
Ruepp, A.2
Frickey, T.3
-
35
-
-
0001862358
-
Sensing and responding to envelope stress
-
G. Storz and R. Hengge-Aronis, Washington, DC: ASM Press
-
Raivio, T. L. and Silhavy, T. J. (2000). Sensing and responding to envelope stress. In G. Storz and R. Hengge-Aronis (eds.), Bacterial stress reponses. Washington, DC: ASM Press. 19—32.
-
(2000)
Bacterial Stress Reponses
, pp. 19-32
-
-
Raivio, T.L.1
Silhavy, T.J.2
-
36
-
-
0029944771
-
Identification of a caulobacter crescentus operon encoding hrca, involved in negatively regulating heat-inducible transcription and the chaperone gene
-
Roberts, R. C., Toochinda, C., Avedissian, M. et al. (1996). Identification of a Caulobacter crescentus operon encoding hrcA, involved in negatively regulating heat-inducible transcription and the chaperone gene grpE. J. Bacteriol., 178, 1829—1841.
-
(1996)
Grpe. J. Bacteriol
, vol.178
, pp. 1829-1841
-
-
Roberts, R.C.1
Toochinda, C.2
Avedissian, M.3
-
37
-
-
0036785675
-
-
promotes ferrous iron uptake and intracellular infection
-
Robey, M. and Cianciotto, N. P. (2002). Legionella pneumophila feoAB promotes ferrous iron uptake and intracellular infection. Infect. Immun., 70, 5659—5669.
-
(2002)
Legionella Pneumophila Feoab
, vol.70
, pp. 5659-5669
-
-
Robey, M.1
Cianciotto, N.P.2
-
38
-
-
22544432327
-
Reconstruction of regulatory and metabolic pathways in metal-reducing 8-proteobacteria
-
Rodionov, D. A., Dubchak, I., Arkin, A. P., Alm, E. J. and Gelfand, M. S. (2004). Reconstruction of regulatory and metabolic pathways in metal-reducing 8-proteobacteria. Genome Biol., 5, R90.
-
(2004)
Genome Biol
, vol.5
-
-
Rodionov, D.A.1
Dubchak, I.2
Arkin, A.P.3
Alm, E.J.4
Gelfand, M.S.5
-
39
-
-
0036062240
-
Ph-dependent expression of periplasmic proteins and amino acid catabolism in
-
Stanik, L. M., Stanik, D. M., Schmid, B. et al. (2002). pH-Dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J. Bacteriol., 184, 4246—4258.
-
(2002)
Escherichia Coli. J. Bacteriol
, vol.184
, pp. 4246-4258
-
-
Stanik, L.M.1
Stanik, D.M.2
Schmid, B.3
-
40
-
-
7544242316
-
Structural basis for the control of translation initiation during stress
-
Vila-Sanjurjo, A., Schuwirth, B. S., Hau, C. W. and Cate, J. H.D. (2004). Structural basis for the control of translation initiation during stress. Nature Struc. Mol. Bio., 11, 1054—1059.
-
(2004)
Nature Struc. Mol. Bio
, vol.11
, pp. 1054-1059
-
-
Vila-Sanjurjo, A.1
Schuwirth, B.S.2
Hau, C.W.3
Cate, J.4
-
41
-
-
0028214186
-
Desulfoviridin, a multimeric-dissimilatory sulfite reductase from desulfovibrio vulgaris hildenborough purification, characterization, kinetics and epr studies
-
Wolfe, B.M., Lui, S.M. and Cowan, J. A. (1994). Desulfoviridin, a multimeric-dissimilatory sulfite reductase from Desulfovibrio vulgaris Hildenborough purification, characterization, kinetics and EPR studies. Eur. J. Biochem., 223, 79—89.
-
(1994)
Eur. J. Biochem
, vol.223
, pp. 79-89
-
-
Wolfe, B.M.1
Lui, S.M.2
Cowan, J.A.3
-
42
-
-
0001897486
-
The heat shock response: Regulation and function
-
G. Storz and R. Hengge-Aronis, Washington, DC: ASM Press
-
Yura, T. K., Kanemori, M. and Morita, M.T. (2000). The heat shock response: regulation and function. In G. Storz and R. Hengge-Aronis (eds.), Bacterial stress reponses. Washington, DC: ASM Press. 3 — 18.
-
(2000)
Bacterial Stress Reponses
-
-
Yura, T.K.1
Kanemori, M.2
Morita, M.T.3
-
43
-
-
0028292919
-
Circe, a novel heat shock element involved in regulation of heat shock operon dnak of
-
Zuber, U. and Schumann, W. (1994). CIRCE, a novel heat shock element involved in regulation of heat shock operon dnaK of Bacillus subtilis. J. Bacteriol., 176, 1359—1363.
-
(1994)
Bacillus Subtilis. J. Bacteriol
, vol.176
, pp. 1359-1363
-
-
Zuber, U.1
Schumann, W.2
|